RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 ANAPC11Q9NYG5 84 aa1.62□□□□□ -2.15
CLOCK-209ENST00000511124 HIGD1BQ9P298 99 aa1.62□□□□□ -2.15
CLOCK-209ENST00000511124 UQCR10Q9UDW1 63 aa1.62□□□□□ -2.15
CLOCK-209ENST00000511124 A0A087X002 238 aa1.62□□□□□ -2.15
CLOCK-209ENST00000511124 K7EQZ3 153 aa1.62□□□□□ -2.15
CLOCK-209ENST00000511124 Q8N377 158 aa1.62□□□□□ -2.15
CLOCK-209ENST00000511124 SMIM11BQ8TCY0 68 aa1.62□□□□□ -2.15
CLOCK-209ENST00000511124 OBSCN-AS1Q96MR7 158 aa1.62□□□□□ -2.15
CLOCK-209ENST00000511124 KRTAP13-3Q3SY46 172 aa1.61□□□□□ -2.15
CLOCK-209ENST00000511124 hDV103S1A0JD37 113 aa1.61□□□□□ -2.15
CLOCK-209ENST00000511124 IGLV5-48A0A075B6I7 105 aa1.61□□□□□ -2.15
CLOCK-209ENST00000511124 BPY2O14599 106 aa1.61□□□□□ -2.15
CLOCK-209ENST00000511124 TAX1BP3O14907 124 aa1.61□□□□□ -2.15
CLOCK-209ENST00000511124 HIST1H2BKO60814 126 aa1.61□□□□□ -2.15
CLOCK-209ENST00000511124 HIST1H2BJP06899 126 aa1.61□□□□□ -2.15
CLOCK-209ENST00000511124 HIST1H2BOP23527 126 aa1.61□□□□□ -2.15
CLOCK-209ENST00000511124 HIST1H2BBP33778 126 aa1.61□□□□□ -2.15
CLOCK-209ENST00000511124 HIST1H2BDP58876 126 aa1.61□□□□□ -2.15
CLOCK-209ENST00000511124 HIST1H2BCP62807 126 aa1.61□□□□□ -2.15
CLOCK-209ENST00000511124 HIST2H2BEQ16778 126 aa1.61□□□□□ -2.15
CLOCK-209ENST00000511124 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.61□□□□□ -2.15
CLOCK-209ENST00000511124 LCE5AQ5TCM9 118 aa1.61□□□□□ -2.15
CLOCK-209ENST00000511124 Q6ZVQ6 151 aa1.61□□□□□ -2.15
CLOCK-209ENST00000511124 KRTAP13-1Q8IUC0 172 aa1.61□□□□□ -2.15
CLOCK-209ENST00000511124 HIST1H2BHQ93079 126 aa1.61□□□□□ -2.15
CLOCK-209ENST00000511124 HIST1H2BNQ99877 126 aa1.61□□□□□ -2.15
CLOCK-209ENST00000511124 HIST1H2BMQ99879 126 aa1.61□□□□□ -2.15
CLOCK-209ENST00000511124 FAM218AQ96MZ4 157 aa1.6□□□□□ -2.15
CLOCK-209ENST00000511124 ERC2-IT1O76042 136 aa1.6□□□□□ -2.15
CLOCK-209ENST00000511124 BAALC-AS2P0C853 105 aa1.6□□□□□ -2.15
CLOCK-209ENST00000511124 HRES1P13985 223 aa1.6□□□□□ -2.15
CLOCK-209ENST00000511124 CXCL6P80162 114 aa1.6□□□□□ -2.15
CLOCK-209ENST00000511124 SPATA45Q537H7 98 aa1.6□□□□□ -2.15
CLOCK-209ENST00000511124 TP53AIP1Q9HCN2 124 aa1.6□□□□□ -2.15
CLOCK-209ENST00000511124 LRP1Q07954 4544 aaKnown RBP1.6□□□□□ -2.15
CLOCK-209ENST00000511124 COX8AP10176 69 aa1.6□□□□□ -2.15
CLOCK-209ENST00000511124 KRTAP10-4P60372 401 aaPredicted RBP1.6□□□□□ -2.15
CLOCK-209ENST00000511124 KRTAP13-2Q52LG2 175 aa1.6□□□□□ -2.15
CLOCK-209ENST00000511124 C7orf65Q6ZTY9 151 aa1.6□□□□□ -2.15
CLOCK-209ENST00000511124 IGKV3D-7A0A0C4DH55 119 aa1.59□□□□□ -2.15
CLOCK-209ENST00000511124 MP68P56378 58 aa1.59□□□□□ -2.15
CLOCK-209ENST00000511124 C1orf195Q5TG92 126 aa1.59□□□□□ -2.15
CLOCK-209ENST00000511124 GTF2H5Q6ZYL4 71 aa1.59□□□□□ -2.15
CLOCK-209ENST00000511124 FAT4Q6V0I7 4981 aa1.59□□□□□ -2.15
CLOCK-209ENST00000511124 HMCN2Q8NDA2 5059 aa1.59□□□□□ -2.15
CLOCK-209ENST00000511124 CSAG1Q6PB30 78 aa1.59□□□□□ -2.15
CLOCK-209ENST00000511124 V9GYY9 64 aa1.59□□□□□ -2.15
CLOCK-209ENST00000511124 PRR15Q8IV56 129 aa1.59□□□□□ -2.16
CLOCK-209ENST00000511124 A0A1B0GVX0 72 aa1.58□□□□□ -2.16
CLOCK-209ENST00000511124 ATOX1O00244 68 aa1.58□□□□□ -2.16
CLOCK-209ENST00000511124 TMEM254Q8TBM7 123 aa1.58□□□□□ -2.16
CLOCK-209ENST00000511124 C20orf166-AS1Q96NR2 134 aa1.58□□□□□ -2.16
CLOCK-209ENST00000511124 ZCCHC13Q8WW36 166 aaKnown RBP1.58□□□□□ -2.16
CLOCK-209ENST00000511124 SSPOA2VEC9 5147 aa1.58□□□□□ -2.16
CLOCK-209ENST00000511124 H3BT86 120 aa1.57□□□□□ -2.16
CLOCK-209ENST00000511124 H3BUT2 72 aa1.57□□□□□ -2.16
CLOCK-209ENST00000511124 C4orf26Q17RF5 130 aa1.57□□□□□ -2.16
CLOCK-209ENST00000511124 ACYP1P07311 99 aa1.57□□□□□ -2.16
CLOCK-209ENST00000511124 ATOH7Q8N100 152 aa1.57□□□□□ -2.16
CLOCK-209ENST00000511124 MRPL34Q9BQ48 92 aaKnown RBP1.57□□□□□ -2.16
CLOCK-209ENST00000511124 SOSTDC1Q6X4U4 206 aa1.56□□□□□ -2.16
CLOCK-209ENST00000511124 IGKV2D-30A0A075B6S6 120 aa1.56□□□□□ -2.16
CLOCK-209ENST00000511124 IGKV2-30P06310 120 aa1.56□□□□□ -2.16
CLOCK-209ENST00000511124 DSCR10P59022 87 aa1.56□□□□□ -2.16
CLOCK-209ENST00000511124 NDUFC1O43677 76 aa1.56□□□□□ -2.16
CLOCK-209ENST00000511124 KRTAP4-16G5E9R7 235 aaPredicted RBP1.55□□□□□ -2.16
CLOCK-209ENST00000511124 CHKB-CPT1BH3BT56 60 aa1.55□□□□□ -2.16
CLOCK-209ENST00000511124 RPS28P62857 69 aaKnown RBP1.55□□□□□ -2.16
CLOCK-209ENST00000511124 APOBP04114 4563 aaKnown RBP1.55□□□□□ -2.16
CLOCK-209ENST00000511124 HCG22E2RYF7 251 aa1.55□□□□□ -2.16
CLOCK-209ENST00000511124 KRTAP10-10P60014 251 aa1.55□□□□□ -2.16
CLOCK-209ENST00000511124 BATFQ16520 125 aa1.55□□□□□ -2.16
CLOCK-209ENST00000511124 ADAMTSL4-AS1Q5T5F5 129 aa1.55□□□□□ -2.16
CLOCK-209ENST00000511124 ATP5EP2Q5VTU8 51 aa1.55□□□□□ -2.16
CLOCK-209ENST00000511124 C8orf17Q9NRJ1 99 aa1.55□□□□□ -2.16
CLOCK-209ENST00000511124 A0A096LNJ9 63 aa1.54□□□□□ -2.16
CLOCK-209ENST00000511124 H1FX-AS1Q4G0G2 97 aa1.54□□□□□ -2.16
CLOCK-209ENST00000511124 A8MUU9 505 aa1.54□□□□□ -2.16
CLOCK-209ENST00000511124 SPINK7P58062 85 aa1.54□□□□□ -2.16
CLOCK-209ENST00000511124 TSPEAR-AS2P59090 65 aa1.54□□□□□ -2.16
CLOCK-209ENST00000511124 LOC101927531A0A1B0GV80 90 aa1.54□□□□□ -2.16
CLOCK-209ENST00000511124 PLAC4Q8WY50 150 aa1.54□□□□□ -2.16
CLOCK-209ENST00000511124 CRIPTQ9P021 101 aa1.54□□□□□ -2.16
CLOCK-209ENST00000511124 PRO2289Q9P1D8 64 aa1.54□□□□□ -2.16
CLOCK-209ENST00000511124 A8MUN3 132 aa1.53□□□□□ -2.16
CLOCK-209ENST00000511124 A0A1B0GV72 72 aa1.52□□□□□ -2.17
CLOCK-209ENST00000511124 MT-ATP8P03928 68 aa1.52□□□□□ -2.17
CLOCK-209ENST00000511124 SMIM20Q8N5G0 67 aa1.52□□□□□ -2.17
CLOCK-209ENST00000511124 FAM104AQ969W3 186 aa1.52□□□□□ -2.17
CLOCK-209ENST00000511124 LOC110117498A0A087WWA1 95 aa1.52□□□□□ -2.17
CLOCK-209ENST00000511124 TRAV22A0A0B4J277 110 aa1.52□□□□□ -2.17
CLOCK-209ENST00000511124 NOTCH2NLQ7Z3S9 236 aa1.52□□□□□ -2.17
CLOCK-209ENST00000511124 KRTAP11-1Q8IUC1 163 aa1.52□□□□□ -2.17
CLOCK-209ENST00000511124 KRTAP7-1Q8IUC3 87 aa1.52□□□□□ -2.17
CLOCK-209ENST00000511124 Q8N9L7 120 aa1.52□□□□□ -2.17
CLOCK-209ENST00000511124 PRO0628Q9UI54 55 aa1.52□□□□□ -2.17
CLOCK-209ENST00000511124 CRCT1Q9UGL9 99 aa1.51□□□□□ -2.17
CLOCK-209ENST00000511124 S4R3F8 94 aa1.51□□□□□ -2.17
CLOCK-209ENST00000511124 H3BPC8 53 aa1.51□□□□□ -2.17
CLOCK-209ENST00000511124 UQCRQO14949 82 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms