RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 USH2AO75445 5202 aa4.67□□□□□ -1.66
PDPN-209ENST00000510906 J3QR89 54 aa4.66□□□□□ -1.66
PDPN-209ENST00000510906 COX6CP09669 75 aa4.66□□□□□ -1.66
PDPN-209ENST00000510906 MACF1Q9UPN3 7388 aaKnown RBP4.65□□□□□ -1.66
PDPN-209ENST00000510906 F8WEM9 126 aa4.65□□□□□ -1.67
PDPN-209ENST00000510906 H3BMG7 143 aa4.65□□□□□ -1.67
PDPN-209ENST00000510906 SCGB1C2P0DMR2 95 aa4.65□□□□□ -1.67
PDPN-209ENST00000510906 PSMB2P49721 201 aa4.65□□□□□ -1.67
PDPN-209ENST00000510906 PCOTHQ58A44 107 aa4.65□□□□□ -1.67
PDPN-209ENST00000510906 ATXN8Q156A1 80 aa4.64□□□□□ -1.67
PDPN-209ENST00000510906 FCGBPQ9Y6R7 5405 aaPredicted RBP4.63□□□□□ -1.67
PDPN-209ENST00000510906 NEBP20929 6669 aa4.63□□□□□ -1.67
PDPN-209ENST00000510906 IGLV8-61A0A075B6I0 122 aa4.63□□□□□ -1.67
PDPN-209ENST00000510906 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.63□□□□□ -1.67
PDPN-209ENST00000510906 PRO0461Q9UI25 63 aa4.63□□□□□ -1.67
PDPN-209ENST00000510906 TCL1BO95988 128 aa4.62□□□□□ -1.67
PDPN-209ENST00000510906 Q6JHZ5 121 aa4.62□□□□□ -1.67
PDPN-209ENST00000510906 IGFL1Q6UW32 110 aa4.62□□□□□ -1.67
PDPN-209ENST00000510906 CLEC2BQ92478 149 aa4.62□□□□□ -1.67
PDPN-209ENST00000510906 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
PDPN-209ENST00000510906 KRTAP16-1A8MUX0 517 aa4.61□□□□□ -1.67
PDPN-209ENST00000510906 KRTAP19-2Q3LHN2 52 aa4.61□□□□□ -1.67
PDPN-209ENST00000510906 TRBV7-7A0A0K0K1E9 115 aa4.6□□□□□ -1.67
PDPN-209ENST00000510906 VPS25Q9BRG1 176 aa4.6□□□□□ -1.67
PDPN-209ENST00000510906 RPL37P61927 97 aaKnown RBP4.59□□□□□ -1.67
PDPN-209ENST00000510906 ETDBQ3ZM63 59 aa4.59□□□□□ -1.67
PDPN-209ENST00000510906 TEN1Q86WV5 123 aa4.59□□□□□ -1.67
PDPN-209ENST00000510906 PPDPFLQ8WWR9 84 aa4.59□□□□□ -1.67
PDPN-209ENST00000510906 C9JAW5 83 aa4.58□□□□□ -1.68
PDPN-209ENST00000510906 H3BT86 120 aa4.58□□□□□ -1.68
PDPN-209ENST00000510906 LST1O00453 97 aa4.58□□□□□ -1.68
PDPN-209ENST00000510906 H0YGX0 51 aa4.57□□□□□ -1.68
PDPN-209ENST00000510906 ANKRD29Q8N6D5 301 aa4.57□□□□□ -1.68
PDPN-209ENST00000510906 TRACP01848 142 aa4.56□□□□□ -1.68
PDPN-209ENST00000510906 MT1HP80294 61 aa4.55□□□□□ -1.68
PDPN-209ENST00000510906 MTURNQ8N3F0 131 aa4.55□□□□□ -1.68
PDPN-209ENST00000510906 SNCGO76070 127 aa4.54□□□□□ -1.68
PDPN-209ENST00000510906 OBSCN-AS1Q96MR7 158 aa4.54□□□□□ -1.68
PDPN-209ENST00000510906 Q6Q795 121 aa4.53□□□□□ -1.68
PDPN-209ENST00000510906 A0A1B0GX51 115 aa4.52□□□□□ -1.69
PDPN-209ENST00000510906 A0A087WSZ3 146 aa4.51□□□□□ -1.69
PDPN-209ENST00000510906 DNAL4O96015 105 aa4.51□□□□□ -1.69
PDPN-209ENST00000510906 SCGB1A1P11684 91 aa4.51□□□□□ -1.69
PDPN-209ENST00000510906 SIGMAR1Q99720 223 aa4.51□□□□□ -1.69
PDPN-209ENST00000510906 SS18L2Q9UHA2 77 aa4.51□□□□□ -1.69
PDPN-209ENST00000510906 FAM240AA0A1B0GVK7 77 aa4.5□□□□□ -1.69
PDPN-209ENST00000510906 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
PDPN-209ENST00000510906 A0A1W2PNM2 257 aa4.49□□□□□ -1.69
PDPN-209ENST00000510906 H3BQ85 93 aa4.49□□□□□ -1.69
PDPN-209ENST00000510906 ACYP1P07311 99 aa4.49□□□□□ -1.69
PDPN-209ENST00000510906 Q96NJ1 140 aa4.49□□□□□ -1.69
PDPN-209ENST00000510906 A0A1B0GV72 72 aa4.48□□□□□ -1.69
PDPN-209ENST00000510906 BAALC-AS2P0C853 105 aa4.48□□□□□ -1.69
PDPN-209ENST00000510906 COX6B2Q6YFQ2 88 aa4.48□□□□□ -1.69
PDPN-209ENST00000510906 ATP11AUNQ6ZP68 121 aa4.48□□□□□ -1.69
PDPN-209ENST00000510906 ORMDL1Q9P0S3 153 aa4.47□□□□□ -1.69
PDPN-209ENST00000510906 KRTAP10-6P60371 365 aaPredicted RBP4.46□□□□□ -1.7
PDPN-209ENST00000510906 C20orf166-AS1Q96NR2 134 aa4.46□□□□□ -1.7
PDPN-209ENST00000510906 A8MUU9 505 aa4.45□□□□□ -1.7
PDPN-209ENST00000510906 M0R2T5 61 aa4.45□□□□□ -1.7
PDPN-209ENST00000510906 DSCR10P59022 87 aa4.45□□□□□ -1.7
PDPN-209ENST00000510906 FLGP20930 4061 aaPredicted RBP4.45□□□□□ -1.7
PDPN-209ENST00000510906 TRBV7-4A0A0J9YYF1 115 aa4.44□□□□□ -1.7
PDPN-209ENST00000510906 TMEM256-PLSCR3K7ERE1 68 aa4.44□□□□□ -1.7
PDPN-209ENST00000510906 GPR98Q8WXG9 6306 aa4.44□□□□□ -1.7
PDPN-209ENST00000510906 JMJD7-PLA2G4BH0Y9G9 81 aa4.43□□□□□ -1.7
PDPN-209ENST00000510906 CCKP06307 115 aa4.42□□□□□ -1.7
PDPN-209ENST00000510906 IGKV4-1P06312 121 aa4.42□□□□□ -1.7
PDPN-209ENST00000510906 DEFB116Q30KQ4 102 aa4.42□□□□□ -1.7
PDPN-209ENST00000510906 MT-ATP8P03928 68 aa4.4□□□□□ -1.71
PDPN-209ENST00000510906 LINC00313P59037 77 aa4.4□□□□□ -1.71
PDPN-209ENST00000510906 IMUPQ9GZP8 106 aa4.4□□□□□ -1.71
PDPN-209ENST00000510906 LINC00472Q9H8W2 130 aa4.4□□□□□ -1.71
PDPN-209ENST00000510906 MUC12Q9UKN1 5478 aa4.39□□□□□ -1.71
PDPN-209ENST00000510906 PDE6GP18545 87 aa4.39□□□□□ -1.71
PDPN-209ENST00000510906 LINC00643Q86TS7 51 aa4.39□□□□□ -1.71
PDPN-209ENST00000510906 RBM3P98179 157 aaKnown RBP4.38□□□□□ -1.71
PDPN-209ENST00000510906 IGHV6-1A0A0B4J1U7 121 aa4.37□□□□□ -1.71
PDPN-209ENST00000510906 DSCR8Q96T75 97 aa4.37□□□□□ -1.71
PDPN-209ENST00000510906 C14orf132Q9NPU4 83 aa4.37□□□□□ -1.71
PDPN-209ENST00000510906 LOC110117498A0A087WWA1 95 aa4.36□□□□□ -1.71
PDPN-209ENST00000510906 LCE1FQ5T754 118 aa4.36□□□□□ -1.71
PDPN-209ENST00000510906 CXCL6P80162 114 aa4.35□□□□□ -1.71
PDPN-209ENST00000510906 A0A1B0GVX0 72 aa4.34□□□□□ -1.71
PDPN-209ENST00000510906 ATP5EP2Q5VTU8 51 aa4.34□□□□□ -1.71
PDPN-209ENST00000510906 C8orf87E5RJ46 101 aa4.33□□□□□ -1.72
PDPN-209ENST00000510906 Q6ZQT0 140 aa4.32□□□□□ -1.72
PDPN-209ENST00000510906 ANAPC13Q9BS18 74 aa4.32□□□□□ -1.72
PDPN-209ENST00000510906 UBL5Q9BZL1 73 aa4.32□□□□□ -1.72
PDPN-209ENST00000510906 FAM236DA0A1B0GTK5 79 aa4.31□□□□□ -1.72
PDPN-209ENST00000510906 A0A1B0GW54 56 aa4.31□□□□□ -1.72
PDPN-209ENST00000510906 J3KT08 172 aa4.31□□□□□ -1.72
PDPN-209ENST00000510906 FAM236CP0DP71 79 aa4.31□□□□□ -1.72
PDPN-209ENST00000510906 HRES1P13985 223 aa4.31□□□□□ -1.72
PDPN-209ENST00000510906 LINC00846Q9NV44 126 aa4.31□□□□□ -1.72
PDPN-209ENST00000510906 KRTAP20-1Q3LI63 56 aa4.28□□□□□ -1.72
PDPN-209ENST00000510906 ZCCHC13Q8WW36 166 aaKnown RBP4.28□□□□□ -1.72
PDPN-209ENST00000510906 FAM236AA0A1B0GUQ0 79 aa4.27□□□□□ -1.73
PDPN-209ENST00000510906 FAM236BA0A1B0GV22 79 aa4.27□□□□□ -1.73
PDPN-209ENST00000510906 NDUFB1O75438 58 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms