RNA–Protein interactions for RNA: ENST00000509712.5

CCDC30-213, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-213ENST00000509712 USP24Q9UPU5 2620 aa2.43□□□□□ -2.02
CCDC30-213ENST00000509712 CHD8Q9HCK8 2581 aa2.43□□□□□ -2.02
CCDC30-213ENST00000509712 OTOGQ6ZRI0 2925 aa2.42□□□□□ -2.02
CCDC30-213ENST00000509712 DEFB124Q8NES8 71 aa2.42□□□□□ -2.02
CCDC30-213ENST00000509712 PIEZO2Q9H5I5 2752 aa2.42□□□□□ -2.02
CCDC30-213ENST00000509712 SPRR5A0A1B0GTR4 108 aa2.41□□□□□ -2.02
CCDC30-213ENST00000509712 KRTAP10-8P60410 259 aa2.41□□□□□ -2.02
CCDC30-213ENST00000509712 CSPG4Q6UVK1 2322 aa2.41□□□□□ -2.02
CCDC30-213ENST00000509712 CREBBPQ92793 2442 aa2.41□□□□□ -2.02
CCDC30-213ENST00000509712 ASH1LQ9NR48 2969 aaKnown RBP2.41□□□□□ -2.02
CCDC30-213ENST00000509712 FRYQ5TBA9 3013 aa2.4□□□□□ -2.02
CCDC30-213ENST00000509712 PKD1L2Q7Z442 2459 aa2.4□□□□□ -2.02
CCDC30-213ENST00000509712 FAM208BQ5VWN6 2430 aa2.4□□□□□ -2.03
CCDC30-213ENST00000509712 WDFY3Q8IZQ1 3526 aa2.4□□□□□ -2.03
CCDC30-213ENST00000509712 SPINK6Q6UWN8 80 aa2.4□□□□□ -2.03
CCDC30-213ENST00000509712 ITPR1Q14643 2758 aa2.38□□□□□ -2.03
CCDC30-213ENST00000509712 SPG11Q96JI7 2443 aa2.38□□□□□ -2.03
CCDC30-213ENST00000509712 A0A0D9SG42 100 aa2.38□□□□□ -2.03
CCDC30-213ENST00000509712 SMG1Q96Q15 3661 aaKnown RBP2.38□□□□□ -2.03
CCDC30-213ENST00000509712 LAMA5O15230 3695 aa2.38□□□□□ -2.03
CCDC30-213ENST00000509712 FASNP49327 2511 aaKnown RBP2.37□□□□□ -2.03
CCDC30-213ENST00000509712 DMXL2Q8TDJ6 3036 aa2.37□□□□□ -2.03
CCDC30-213ENST00000509712 LOC400499M0QZD8 3231 aa2.37□□□□□ -2.03
CCDC30-213ENST00000509712 ANKRD11Q6UB99 2663 aaPredicted RBP2.37□□□□□ -2.03
CCDC30-213ENST00000509712 SETXQ7Z333 2677 aaKnown RBP2.37□□□□□ -2.03
CCDC30-213ENST00000509712 KALRNO60229 2985 aa2.37□□□□□ -2.03
CCDC30-213ENST00000509712 MAP1AP78559 2803 aaPredicted RBP2.36□□□□□ -2.03
CCDC30-213ENST00000509712 FREM2Q5SZK8 3169 aa2.36□□□□□ -2.03
CCDC30-213ENST00000509712 LAMA1P25391 3075 aa2.36□□□□□ -2.03
CCDC30-213ENST00000509712 KRTAP12-1P59990 96 aa2.36□□□□□ -2.03
CCDC30-213ENST00000509712 UBR5O95071 2799 aaPredicted RBP2.35□□□□□ -2.03
CCDC30-213ENST00000509712 GCN1Q92616 2671 aaKnown RBP2.35□□□□□ -2.03
CCDC30-213ENST00000509712 ZFYVE26Q68DK2 2539 aa2.35□□□□□ -2.03
CCDC30-213ENST00000509712 DSPP15924 2871 aaKnown RBP2.35□□□□□ -2.03
CCDC30-213ENST00000509712 KRTAP13-4Q3LI77 160 aa2.35□□□□□ -2.03
CCDC30-213ENST00000509712 CEP295Q9C0D2 2601 aa2.35□□□□□ -2.03
CCDC30-213ENST00000509712 AKAP13Q12802 2813 aa2.35□□□□□ -2.03
CCDC30-213ENST00000509712 ZNF462Q96JM2 2506 aa2.34□□□□□ -2.04
CCDC30-213ENST00000509712 CELSR2Q9HCU4 2923 aa2.34□□□□□ -2.04
CCDC30-213ENST00000509712 FLNBO75369 2602 aaKnown RBP2.34□□□□□ -2.04
CCDC30-213ENST00000509712 ANKHD1Q8IWZ3 2542 aaKnown RBP2.33□□□□□ -2.04
CCDC30-213ENST00000509712 J3QKU1 62 aa2.33□□□□□ -2.04
CCDC30-213ENST00000509712 M0QZ58 72 aa2.33□□□□□ -2.04
CCDC30-213ENST00000509712 HTN3P15516 51 aa2.33□□□□□ -2.04
CCDC30-213ENST00000509712 ABCA2Q9BZC7 2435 aa2.33□□□□□ -2.04
CCDC30-213ENST00000509712 IGSF10Q6WRI0 2623 aa2.33□□□□□ -2.04
CCDC30-213ENST00000509712 CELSR3Q9NYQ7 3312 aa2.32□□□□□ -2.04
CCDC30-213ENST00000509712 NBASA2RRP1 2371 aa2.32□□□□□ -2.04
CCDC30-213ENST00000509712 HELZ2Q9BYK8 2649 aaKnown RBP2.32□□□□□ -2.04
CCDC30-213ENST00000509712 Q5VSD8 79 aa2.32□□□□□ -2.04
CCDC30-213ENST00000509712 BOD1L1Q8NFC6 3051 aa2.31□□□□□ -2.04
CCDC30-213ENST00000509712 MAST4O15021 2626 aa2.31□□□□□ -2.04
CCDC30-213ENST00000509712 TENM4Q6N022 2769 aa2.31□□□□□ -2.04
CCDC30-213ENST00000509712 F8P00451 2351 aa2.3□□□□□ -2.04
CCDC30-213ENST00000509712 NAV2Q8IVL1 2488 aa2.29□□□□□ -2.04
CCDC30-213ENST00000509712 DEFB135Q30KP9 77 aa2.28□□□□□ -2.04
CCDC30-213ENST00000509712 LCE3AQ5TA76 89 aa2.28□□□□□ -2.04
CCDC30-213ENST00000509712 CFAP46Q8IYW2 2715 aa2.28□□□□□ -2.04
CCDC30-213ENST00000509712 HIVEP3Q5T1R4 2406 aa2.27□□□□□ -2.05
CCDC30-213ENST00000509712 CCDC168Q8NDH2 2452 aa2.27□□□□□ -2.05
CCDC30-213ENST00000509712 MYO18BQ8IUG5 2567 aa2.27□□□□□ -2.05
CCDC30-213ENST00000509712 ATMQ13315 3056 aa2.27□□□□□ -2.05
CCDC30-213ENST00000509712 SPTAN1Q13813 2472 aaKnown RBP2.27□□□□□ -2.05
CCDC30-213ENST00000509712 UNC79Q9P2D8 2635 aa2.26□□□□□ -2.05
CCDC30-213ENST00000509712 JMJD1CQ15652 2540 aa2.26□□□□□ -2.05
CCDC30-213ENST00000509712 COL12A1Q99715 3063 aa2.26□□□□□ -2.05
CCDC30-213ENST00000509712 HECTD1Q9ULT8 2610 aa2.26□□□□□ -2.05
CCDC30-213ENST00000509712 SONP18583 2426 aaKnown RBP2.26□□□□□ -2.05
CCDC30-213ENST00000509712 DEFB4AO15263 64 aa2.26□□□□□ -2.05
CCDC30-213ENST00000509712 PRRC2CQ9Y520 2896 aaKnown RBP2.26□□□□□ -2.05
CCDC30-213ENST00000509712 LRBAP50851 2863 aa2.25□□□□□ -2.05
CCDC30-213ENST00000509712 AKAP9Q99996 3911 aa2.25□□□□□ -2.05
CCDC30-213ENST00000509712 NBPF19A0A087WUL8 3843 aa2.25□□□□□ -2.05
CCDC30-213ENST00000509712 BSNQ9UPA5 3926 aa2.24□□□□□ -2.05
CCDC30-213ENST00000509712 RELNP78509 3460 aa2.24□□□□□ -2.05
CCDC30-213ENST00000509712 TEX15Q9BXT5 2789 aa2.24□□□□□ -2.05
CCDC30-213ENST00000509712 CRYBG3Q68DQ2 2970 aa2.24□□□□□ -2.05
CCDC30-213ENST00000509712 TLN1Q9Y490 2541 aaKnown RBP2.23□□□□□ -2.05
CCDC30-213ENST00000509712 FBN1P35555 2871 aaKnown RBP2.23□□□□□ -2.05
CCDC30-213ENST00000509712 USP9XQ93008 2570 aaPredicted RBP2.22□□□□□ -2.05
CCDC30-213ENST00000509712 VWFP04275 2813 aa2.22□□□□□ -2.05
CCDC30-213ENST00000509712 COL6A5A8TX70 2615 aa2.22□□□□□ -2.05
CCDC30-213ENST00000509712 PTPN13Q12923 2485 aa2.21□□□□□ -2.05
CCDC30-213ENST00000509712 KRTAP21-3Q3LHN1 58 aa2.21□□□□□ -2.06
CCDC30-213ENST00000509712 KRTAP13-2Q52LG2 175 aa2.21□□□□□ -2.06
CCDC30-213ENST00000509712 SRRM2Q9UQ35 2752 aaKnown RBP2.21□□□□□ -2.06
CCDC30-213ENST00000509712 NF1P21359 2839 aa2.21□□□□□ -2.06
CCDC30-213ENST00000509712 MYO9AB2RTY4 2548 aa2.2□□□□□ -2.06
CCDC30-213ENST00000509712 FBN2P35556 2912 aa2.2□□□□□ -2.06
CCDC30-213ENST00000509712 RPS29P62273 56 aaKnown RBP2.2□□□□□ -2.06
CCDC30-213ENST00000509712 TEP1Q99973 2627 aaKnown RBP2.2□□□□□ -2.06
CCDC30-213ENST00000509712 SPENQ96T58 3664 aaKnown RBP2.19□□□□□ -2.06
CCDC30-213ENST00000509712 FLNCQ14315 2725 aa2.19□□□□□ -2.06
CCDC30-213ENST00000509712 DMBT1Q9UGM3 2413 aaPredicted RBP2.19□□□□□ -2.06
CCDC30-213ENST00000509712 CSMD1Q96PZ7 3565 aa2.19□□□□□ -2.06
CCDC30-213ENST00000509712 TACC2O95359 2948 aa2.19□□□□□ -2.06
CCDC30-213ENST00000509712 VPS13DQ5THJ4 4388 aa2.19□□□□□ -2.06
CCDC30-213ENST00000509712 USP9YO00507 2555 aaPredicted RBP2.18□□□□□ -2.06
CCDC30-213ENST00000509712 UTP20O75691 2785 aaKnown RBP2.18□□□□□ -2.06
CCDC30-213ENST00000509712 APCP25054 2843 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms