RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 COX6B2Q6YFQ2 88 aa4.64□□□□□ -1.67
PDLIM5-213ENST00000509357 A0A1B0GV90 55 aa4.63□□□□□ -1.67
PDLIM5-213ENST00000509357 IGKV4-1P06312 121 aa4.63□□□□□ -1.67
PDLIM5-213ENST00000509357 KRTAP19-2Q3LHN2 52 aa4.62□□□□□ -1.67
PDLIM5-213ENST00000509357 SIGMAR1Q99720 223 aa4.62□□□□□ -1.67
PDLIM5-213ENST00000509357 Q75L30 129 aa4.61□□□□□ -1.67
PDLIM5-213ENST00000509357 ETDBQ3ZM63 59 aa4.6□□□□□ -1.67
PDLIM5-213ENST00000509357 LCE2CQ5TA81 110 aa4.6□□□□□ -1.67
PDLIM5-213ENST00000509357 GTF2H5Q6ZYL4 71 aa4.6□□□□□ -1.67
PDLIM5-213ENST00000509357 IGKV3D-7A0A0C4DH55 119 aa4.59□□□□□ -1.67
PDLIM5-213ENST00000509357 M0R2T5 61 aa4.59□□□□□ -1.67
PDLIM5-213ENST00000509357 PDE6GP18545 87 aa4.59□□□□□ -1.67
PDLIM5-213ENST00000509357 C20orf166-AS1Q96NR2 134 aa4.59□□□□□ -1.67
PDLIM5-213ENST00000509357 FLGP20930 4061 aaPredicted RBP4.59□□□□□ -1.68
PDLIM5-213ENST00000509357 A8MUU9 505 aa4.58□□□□□ -1.68
PDLIM5-213ENST00000509357 F8W1H4 67 aa4.58□□□□□ -1.68
PDLIM5-213ENST00000509357 MT1HP80294 61 aa4.58□□□□□ -1.68
PDLIM5-213ENST00000509357 LINC00846Q9NV44 126 aa4.58□□□□□ -1.68
PDLIM5-213ENST00000509357 IGHV6-1A0A0B4J1U7 121 aa4.57□□□□□ -1.68
PDLIM5-213ENST00000509357 A0A1B0GVX0 72 aa4.57□□□□□ -1.68
PDLIM5-213ENST00000509357 A0A1B0GW54 56 aa4.57□□□□□ -1.68
PDLIM5-213ENST00000509357 Q6ZVQ6 151 aa4.57□□□□□ -1.68
PDLIM5-213ENST00000509357 LINC00313P59037 77 aa4.56□□□□□ -1.68
PDLIM5-213ENST00000509357 A8MWP4 228 aa4.55□□□□□ -1.68
PDLIM5-213ENST00000509357 K7EQZ3 153 aa4.55□□□□□ -1.68
PDLIM5-213ENST00000509357 KRTAP3-3Q9BYR6 98 aa4.55□□□□□ -1.68
PDLIM5-213ENST00000509357 KRTAP3-2Q9BYR7 98 aa4.55□□□□□ -1.68
PDLIM5-213ENST00000509357 Q8N9L7 120 aa4.54□□□□□ -1.68
PDLIM5-213ENST00000509357 MMP24-AS1A0A0U1RRL7 71 aa4.53□□□□□ -1.68
PDLIM5-213ENST00000509357 NREPQ16612 68 aa4.53□□□□□ -1.68
PDLIM5-213ENST00000509357 C8orf17Q9NRJ1 99 aa4.53□□□□□ -1.68
PDLIM5-213ENST00000509357 J3KT08 172 aa4.52□□□□□ -1.69
PDLIM5-213ENST00000509357 BPY2O14599 106 aa4.52□□□□□ -1.69
PDLIM5-213ENST00000509357 PRR15Q8IV56 129 aa4.52□□□□□ -1.69
PDLIM5-213ENST00000509357 C21orf62-AS1Q17RA5 79 aa4.51□□□□□ -1.69
PDLIM5-213ENST00000509357 FSIP2Q5CZC0 6907 aa4.51□□□□□ -1.69
PDLIM5-213ENST00000509357 KRTAP9-6A0A140TA67 174 aa4.5□□□□□ -1.69
PDLIM5-213ENST00000509357 C8orf87E5RJ46 101 aa4.5□□□□□ -1.69
PDLIM5-213ENST00000509357 KRTAP10-6P60371 365 aaPredicted RBP4.49□□□□□ -1.69
PDLIM5-213ENST00000509357 Q8N9P0 234 aaPredicted RBP4.49□□□□□ -1.69
PDLIM5-213ENST00000509357 NDUFB1O75438 58 aa4.48□□□□□ -1.69
PDLIM5-213ENST00000509357 FAM236DA0A1B0GTK5 79 aa4.47□□□□□ -1.69
PDLIM5-213ENST00000509357 FAM236CP0DP71 79 aa4.47□□□□□ -1.69
PDLIM5-213ENST00000509357 LORP23490 312 aaPredicted RBP4.46□□□□□ -1.7
PDLIM5-213ENST00000509357 RBM12B-AS1Q9P1G2 102 aa4.45□□□□□ -1.7
PDLIM5-213ENST00000509357 HRES1P13985 223 aa4.44□□□□□ -1.7
PDLIM5-213ENST00000509357 TMEM254Q8TBM7 123 aa4.44□□□□□ -1.7
PDLIM5-213ENST00000509357 MRPL34Q9BQ48 92 aaKnown RBP4.44□□□□□ -1.7
PDLIM5-213ENST00000509357 UBL5Q9BZL1 73 aa4.44□□□□□ -1.7
PDLIM5-213ENST00000509357 FAM240AA0A1B0GVK7 77 aa4.43□□□□□ -1.7
PDLIM5-213ENST00000509357 hDV103S1A0JD37 113 aa4.43□□□□□ -1.7
PDLIM5-213ENST00000509357 Q5W150 140 aa4.43□□□□□ -1.7
PDLIM5-213ENST00000509357 WFDC13Q8IUB5 93 aa4.43□□□□□ -1.7
PDLIM5-213ENST00000509357 MPLKIPQ8TAP9 179 aa4.43□□□□□ -1.7
PDLIM5-213ENST00000509357 ZCCHC13Q8WW36 166 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-213ENST00000509357 SVIPQ8NHG7 77 aa4.42□□□□□ -1.7
PDLIM5-213ENST00000509357 CRCT1Q9UGL9 99 aa4.41□□□□□ -1.7
PDLIM5-213ENST00000509357 CXCL6P80162 114 aa4.4□□□□□ -1.71
PDLIM5-213ENST00000509357 CASC2Q6XLA1 102 aa4.39□□□□□ -1.71
PDLIM5-213ENST00000509357 HCG22E2RYF7 251 aa4.38□□□□□ -1.71
PDLIM5-213ENST00000509357 ACYP1P07311 99 aa4.38□□□□□ -1.71
PDLIM5-213ENST00000509357 SPINK7P58062 85 aa4.37□□□□□ -1.71
PDLIM5-213ENST00000509357 A0A087WVE0 104 aa4.36□□□□□ -1.71
PDLIM5-213ENST00000509357 NDUFS5O43920 106 aa4.35□□□□□ -1.71
PDLIM5-213ENST00000509357 LINC00643Q86TS7 51 aa4.33□□□□□ -1.72
PDLIM5-213ENST00000509357 ATP5EP2Q5VTU8 51 aa4.31□□□□□ -1.72
PDLIM5-213ENST00000509357 KRTAP9-8Q9BYQ0 159 aa4.31□□□□□ -1.72
PDLIM5-213ENST00000509357 HIST1H4AP62805 103 aaKnown RBP4.29□□□□□ -1.72
PDLIM5-213ENST00000509357 IGKV2D-30A0A075B6S6 120 aa4.28□□□□□ -1.72
PDLIM5-213ENST00000509357 IGKV2-30P06310 120 aa4.28□□□□□ -1.72
PDLIM5-213ENST00000509357 KRTAP10-10P60014 251 aa4.28□□□□□ -1.72
PDLIM5-213ENST00000509357 MT2AP02795 61 aa4.27□□□□□ -1.73
PDLIM5-213ENST00000509357 MT-ATP8P03928 68 aa4.27□□□□□ -1.73
PDLIM5-213ENST00000509357 KRTAP3-1Q9BYR8 98 aa4.27□□□□□ -1.73
PDLIM5-213ENST00000509357 USH2AO75445 5202 aa4.26□□□□□ -1.73
PDLIM5-213ENST00000509357 C7orf65Q6ZTY9 151 aa4.25□□□□□ -1.73
PDLIM5-213ENST00000509357 J3QR89 54 aa4.24□□□□□ -1.73
PDLIM5-213ENST00000509357 MT1FP04733 61 aa4.24□□□□□ -1.73
PDLIM5-213ENST00000509357 OCR1Q9BZK8 76 aa4.24□□□□□ -1.73
PDLIM5-213ENST00000509357 C4orf26Q17RF5 130 aa4.23□□□□□ -1.73
PDLIM5-213ENST00000509357 SSPOA2VEC9 5147 aa4.23□□□□□ -1.73
PDLIM5-213ENST00000509357 H1FX-AS1Q4G0G2 97 aa4.22□□□□□ -1.73
PDLIM5-213ENST00000509357 TP53AIP1Q9HCN2 124 aa4.22□□□□□ -1.73
PDLIM5-213ENST00000509357 K7ERU9 68 aa4.21□□□□□ -1.74
PDLIM5-213ENST00000509357 TRAV22A0A0B4J277 110 aa4.2□□□□□ -1.74
PDLIM5-213ENST00000509357 CYP4F30PQ9H0H9 118 aa4.2□□□□□ -1.74
PDLIM5-213ENST00000509357 H0Y9P7 68 aa4.18□□□□□ -1.74
PDLIM5-213ENST00000509357 UQCRQO14949 82 aa4.18□□□□□ -1.74
PDLIM5-213ENST00000509357 KLKP1Q107X0 134 aa4.18□□□□□ -1.74
PDLIM5-213ENST00000509357 KRTAP9-3Q9BYQ3 159 aa4.18□□□□□ -1.74
PDLIM5-213ENST00000509357 LCE2BO14633 110 aa4.16□□□□□ -1.74
PDLIM5-213ENST00000509357 LOC100996750A0A140TA64 210 aa4.15□□□□□ -1.75
PDLIM5-213ENST00000509357 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.75
PDLIM5-213ENST00000509357 IMUPQ9GZP8 106 aa4.14□□□□□ -1.75
PDLIM5-213ENST00000509357 FAM236AA0A1B0GUQ0 79 aa4.13□□□□□ -1.75
PDLIM5-213ENST00000509357 FAM236BA0A1B0GV22 79 aa4.13□□□□□ -1.75
PDLIM5-213ENST00000509357 LOC101927531A0A1B0GV80 90 aa4.13□□□□□ -1.75
PDLIM5-213ENST00000509357 C1orf64Q8NEQ6 169 aa4.13□□□□□ -1.75
PDLIM5-213ENST00000509357 LINC00208Q96KT6 92 aa4.13□□□□□ -1.75
PDLIM5-213ENST00000509357 FCGBPQ9Y6R7 5405 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms