RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 RPS29P62273 56 aaKnown RBP3.19□□□□□ -1.9
HMGB1P44-201ENST00000508597 C9orf153Q5TBE3 101 aa3.19□□□□□ -1.9
HMGB1P44-201ENST00000508597 C3orf22Q8N5N4 141 aa3.19□□□□□ -1.9
HMGB1P44-201ENST00000508597 LINC00304Q8N9R0 145 aa3.19□□□□□ -1.9
HMGB1P44-201ENST00000508597 SPINK1P00995 79 aa3.18□□□□□ -1.9
HMGB1P44-201ENST00000508597 CD164Q04900 197 aa3.18□□□□□ -1.9
HMGB1P44-201ENST00000508597 MOBPQ13875 183 aa3.18□□□□□ -1.9
HMGB1P44-201ENST00000508597 BAALC-AS2P0C853 105 aa3.17□□□□□ -1.9
HMGB1P44-201ENST00000508597 KRTAP5-4Q6L8H1 288 aa3.17□□□□□ -1.9
HMGB1P44-201ENST00000508597 NAA38Q9BRA0 125 aaKnown RBP3.17□□□□□ -1.9
HMGB1P44-201ENST00000508597 SPCS1Q9Y6A9 102 aa3.17□□□□□ -1.9
HMGB1P44-201ENST00000508597 JMJD7-PLA2G4BH0Y9G9 81 aa3.16□□□□□ -1.9
HMGB1P44-201ENST00000508597 H3BMG7 143 aa3.16□□□□□ -1.9
HMGB1P44-201ENST00000508597 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
HMGB1P44-201ENST00000508597 H3BT86 120 aa3.15□□□□□ -1.91
HMGB1P44-201ENST00000508597 RBM3P98179 157 aaKnown RBP3.15□□□□□ -1.91
HMGB1P44-201ENST00000508597 Q5XG85 94 aa3.15□□□□□ -1.91
HMGB1P44-201ENST00000508597 Q6Q795 121 aa3.15□□□□□ -1.91
HMGB1P44-201ENST00000508597 ANKRD29Q8N6D5 301 aa3.15□□□□□ -1.91
HMGB1P44-201ENST00000508597 LIMD2Q9BT23 127 aa3.15□□□□□ -1.91
HMGB1P44-201ENST00000508597 A0A1B0GV72 72 aa3.14□□□□□ -1.91
HMGB1P44-201ENST00000508597 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
HMGB1P44-201ENST00000508597 C9JAW5 83 aa3.14□□□□□ -1.91
HMGB1P44-201ENST00000508597 F8W1H4 67 aa3.14□□□□□ -1.91
HMGB1P44-201ENST00000508597 PDE6GP18545 87 aa3.14□□□□□ -1.91
HMGB1P44-201ENST00000508597 DSCR10P59022 87 aa3.14□□□□□ -1.91
HMGB1P44-201ENST00000508597 IGFL1Q6UW32 110 aa3.14□□□□□ -1.91
HMGB1P44-201ENST00000508597 TEN1Q86WV5 123 aa3.14□□□□□ -1.91
HMGB1P44-201ENST00000508597 MTURNQ8N3F0 131 aa3.14□□□□□ -1.91
HMGB1P44-201ENST00000508597 DSCR8Q96T75 97 aa3.14□□□□□ -1.91
HMGB1P44-201ENST00000508597 UBR4Q5T4S7 5183 aa3.14□□□□□ -1.91
HMGB1P44-201ENST00000508597 HERC1Q15751 4861 aa3.14□□□□□ -1.91
HMGB1P44-201ENST00000508597 A0A1B0GW54 56 aa3.13□□□□□ -1.91
HMGB1P44-201ENST00000508597 SS18L2Q9UHA2 77 aa3.13□□□□□ -1.91
HMGB1P44-201ENST00000508597 TRBV7-4A0A0J9YYF1 115 aa3.12□□□□□ -1.91
HMGB1P44-201ENST00000508597 TRBV7-7A0A0K0K1E9 115 aa3.12□□□□□ -1.91
HMGB1P44-201ENST00000508597 ASB16-AS1Q495Z4 193 aa3.12□□□□□ -1.91
HMGB1P44-201ENST00000508597 FP248Q71RG6 208 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P44-201ENST00000508597 LOC110117498A0A087WWA1 95 aa3.11□□□□□ -1.91
HMGB1P44-201ENST00000508597 OBSCN-AS1Q96MR7 158 aa3.11□□□□□ -1.91
HMGB1P44-201ENST00000508597 SIGMAR1Q99720 223 aa3.11□□□□□ -1.91
HMGB1P44-201ENST00000508597 CCKP06307 115 aa3.1□□□□□ -1.91
HMGB1P44-201ENST00000508597 HRCT1Q6UXD1 115 aa3.1□□□□□ -1.91
HMGB1P44-201ENST00000508597 PRO0461Q9UI25 63 aa3.1□□□□□ -1.91
HMGB1P44-201ENST00000508597 A0A1W2PNM2 257 aa3.09□□□□□ -1.91
HMGB1P44-201ENST00000508597 Q6ZQT0 140 aa3.09□□□□□ -1.91
HMGB1P44-201ENST00000508597 A0A0G2JQZ4 141 aa3.08□□□□□ -1.92
HMGB1P44-201ENST00000508597 PRR4Q16378 134 aa3.08□□□□□ -1.92
HMGB1P44-201ENST00000508597 A0A087WSZ3 146 aa3.07□□□□□ -1.92
HMGB1P44-201ENST00000508597 C1orf195Q5TG92 126 aa3.07□□□□□ -1.92
HMGB1P44-201ENST00000508597 C14orf132Q9NPU4 83 aa3.07□□□□□ -1.92
HMGB1P44-201ENST00000508597 HMCN2Q8NDA2 5059 aa3.07□□□□□ -1.92
HMGB1P44-201ENST00000508597 CXCL6P80162 114 aa3.06□□□□□ -1.92
HMGB1P44-201ENST00000508597 TPRXLQ17RH7 258 aa3.06□□□□□ -1.92
HMGB1P44-201ENST00000508597 J3KT08 172 aa3.05□□□□□ -1.92
HMGB1P44-201ENST00000508597 ETDBQ3ZM63 59 aa3.05□□□□□ -1.92
HMGB1P44-201ENST00000508597 RETNLBQ9BQ08 111 aa3.05□□□□□ -1.92
HMGB1P44-201ENST00000508597 LINC00472Q9H8W2 130 aa3.04□□□□□ -1.92
HMGB1P44-201ENST00000508597 NREPQ16612 68 aa3.03□□□□□ -1.92
HMGB1P44-201ENST00000508597 KRTAP13-3Q3SY46 172 aa3.03□□□□□ -1.92
HMGB1P44-201ENST00000508597 Q96NJ1 140 aa3.03□□□□□ -1.92
HMGB1P44-201ENST00000508597 LRP2P98164 4655 aa3.02□□□□□ -1.93
HMGB1P44-201ENST00000508597 IGKV4-1P06312 121 aa3.02□□□□□ -1.93
HMGB1P44-201ENST00000508597 ACYP1P07311 99 aa3.02□□□□□ -1.93
HMGB1P44-201ENST00000508597 UBL5Q9BZL1 73 aa3.02□□□□□ -1.93
HMGB1P44-201ENST00000508597 FAM240AA0A1B0GVK7 77 aa3.01□□□□□ -1.93
HMGB1P44-201ENST00000508597 NDUFB1O75438 58 aa3.01□□□□□ -1.93
HMGB1P44-201ENST00000508597 ANAPC13Q9BS18 74 aa3.01□□□□□ -1.93
HMGB1P44-201ENST00000508597 C8orf87E5RJ46 101 aa3□□□□□ -1.93
HMGB1P44-201ENST00000508597 A0A1B0GVX0 72 aa2.99□□□□□ -1.93
HMGB1P44-201ENST00000508597 A8MWP4 228 aa2.99□□□□□ -1.93
HMGB1P44-201ENST00000508597 BPY2O14599 106 aa2.99□□□□□ -1.93
HMGB1P44-201ENST00000508597 MT-ATP8P03928 68 aa2.99□□□□□ -1.93
HMGB1P44-201ENST00000508597 LINC00313P59037 77 aa2.99□□□□□ -1.93
HMGB1P44-201ENST00000508597 LINC00846Q9NV44 126 aa2.99□□□□□ -1.93
HMGB1P44-201ENST00000508597 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
HMGB1P44-201ENST00000508597 LPAP08519 4548 aa2.98□□□□□ -1.93
HMGB1P44-201ENST00000508597 IGHV6-1A0A0B4J1U7 121 aa2.97□□□□□ -1.93
HMGB1P44-201ENST00000508597 C9orf92A6NGG3 77 aa2.97□□□□□ -1.93
HMGB1P44-201ENST00000508597 DEFB116Q30KQ4 102 aa2.97□□□□□ -1.93
HMGB1P44-201ENST00000508597 PRR15Q8IV56 129 aa2.97□□□□□ -1.93
HMGB1P44-201ENST00000508597 IMUPQ9GZP8 106 aa2.97□□□□□ -1.93
HMGB1P44-201ENST00000508597 IGKV3D-7A0A0C4DH55 119 aa2.96□□□□□ -1.94
HMGB1P44-201ENST00000508597 ATP5EP2Q5VTU8 51 aa2.96□□□□□ -1.94
HMGB1P44-201ENST00000508597 C20orf166-AS1Q96NR2 134 aa2.96□□□□□ -1.94
HMGB1P44-201ENST00000508597 A8MUU9 505 aa2.95□□□□□ -1.94
HMGB1P44-201ENST00000508597 RPL37P61927 97 aaKnown RBP2.95□□□□□ -1.94
HMGB1P44-201ENST00000508597 LINC00643Q86TS7 51 aa2.94□□□□□ -1.94
HMGB1P44-201ENST00000508597 C8orf17Q9NRJ1 99 aa2.94□□□□□ -1.94
HMGB1P44-201ENST00000508597 K7EQZ3 153 aa2.93□□□□□ -1.94
HMGB1P44-201ENST00000508597 ATP11AUNQ6ZP68 121 aa2.93□□□□□ -1.94
HMGB1P44-201ENST00000508597 TMEM254Q8TBM7 123 aa2.93□□□□□ -1.94
HMGB1P44-201ENST00000508597 MUC17Q685J3 4493 aa2.93□□□□□ -1.94
HMGB1P44-201ENST00000508597 MMP24-AS1A0A0U1RRL7 71 aa2.92□□□□□ -1.94
HMGB1P44-201ENST00000508597 hDV103S1A0JD37 113 aa2.92□□□□□ -1.94
HMGB1P44-201ENST00000508597 MRPL34Q9BQ48 92 aaKnown RBP2.92□□□□□ -1.94
HMGB1P44-201ENST00000508597 CCDC179H3BU77 68 aa2.91□□□□□ -1.94
HMGB1P44-201ENST00000508597 ATOX1O00244 68 aa2.91□□□□□ -1.94
HMGB1P44-201ENST00000508597 UQCRQO14949 82 aa2.91□□□□□ -1.94
HMGB1P44-201ENST00000508597 RNF213Q63HN8 5207 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms