RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 EGFEM1PQ0D2K5 195 aa2.89□□□□□ -1.95
PDLIM5-211ENST00000508531 C1orf137Q5JT78 98 aa2.89□□□□□ -1.95
PDLIM5-211ENST00000508531 C9orf163Q8N9P6 203 aa2.89□□□□□ -1.95
PDLIM5-211ENST00000508531 CHCHD10Q8WYQ3 142 aaPredicted RBP2.89□□□□□ -1.95
PDLIM5-211ENST00000508531 CSMD3Q7Z407 3707 aa2.89□□□□□ -1.95
PDLIM5-211ENST00000508531 HERC2O95714 4834 aa2.89□□□□□ -1.95
PDLIM5-211ENST00000508531 SACSQ9NZJ4 4579 aa2.88□□□□□ -1.95
PDLIM5-211ENST00000508531 DYNC2H1Q8NCM8 4307 aaKnown RBP2.88□□□□□ -1.95
PDLIM5-211ENST00000508531 IGKV2D-24A0A075B6R9 120 aa2.88□□□□□ -1.95
PDLIM5-211ENST00000508531 DEFB131BA0A096LNP1 70 aa2.88□□□□□ -1.95
PDLIM5-211ENST00000508531 REG3AQ06141 175 aa2.88□□□□□ -1.95
PDLIM5-211ENST00000508531 DEFB112Q30KQ8 113 aa2.88□□□□□ -1.95
PDLIM5-211ENST00000508531 KLK12Q9UKR0 248 aa2.88□□□□□ -1.95
PDLIM5-211ENST00000508531 COL7A1Q02388 2944 aa2.88□□□□□ -1.95
PDLIM5-211ENST00000508531 PRR4Q16378 134 aa2.87□□□□□ -1.95
PDLIM5-211ENST00000508531 Q8NAQ8 132 aa2.87□□□□□ -1.95
PDLIM5-211ENST00000508531 TYMSOSQ8TAI1 123 aa2.87□□□□□ -1.95
PDLIM5-211ENST00000508531 LYSTQ99698 3801 aa2.87□□□□□ -1.95
PDLIM5-211ENST00000508531 XAGE1AQ9HD64 81 aa2.87□□□□□ -1.95
PDLIM5-211ENST00000508531 NOP10Q9NPE3 64 aaKnown RBP2.87□□□□□ -1.95
PDLIM5-211ENST00000508531 PRO0255Q9UI72 69 aa2.87□□□□□ -1.95
PDLIM5-211ENST00000508531 B4DSR2 109 aa2.86□□□□□ -1.95
PDLIM5-211ENST00000508531 K7EQZ3 153 aa2.86□□□□□ -1.95
PDLIM5-211ENST00000508531 LY6EQ16553 131 aa2.86□□□□□ -1.95
PDLIM5-211ENST00000508531 ST20-AS1Q8NBB2 130 aa2.86□□□□□ -1.95
PDLIM5-211ENST00000508531 C4orf3Q8WVX3 66 aa2.86□□□□□ -1.95
PDLIM5-211ENST00000508531 DNAH3Q8TD57 4116 aa2.86□□□□□ -1.95
PDLIM5-211ENST00000508531 DNAH1Q9P2D7 4330 aa2.85□□□□□ -1.95
PDLIM5-211ENST00000508531 ANGP03950 147 aaKnown RBP2.85□□□□□ -1.95
PDLIM5-211ENST00000508531 SPAG11AQ6PDA7 123 aa2.85□□□□□ -1.95
PDLIM5-211ENST00000508531 DNAH9Q9NYC9 4486 aa2.85□□□□□ -1.95
PDLIM5-211ENST00000508531 A0A1W2PNM2 257 aa2.84□□□□□ -1.95
PDLIM5-211ENST00000508531 MSMBP08118 114 aa2.84□□□□□ -1.95
PDLIM5-211ENST00000508531 CASC10Q5T4H9 136 aa2.84□□□□□ -1.95
PDLIM5-211ENST00000508531 UNQ6190/PRO20217Q6UXQ8 127 aa2.84□□□□□ -1.95
PDLIM5-211ENST00000508531 Q6ZRX8 168 aa2.84□□□□□ -1.95
PDLIM5-211ENST00000508531 A8MWP4 228 aa2.83□□□□□ -1.96
PDLIM5-211ENST00000508531 K7EIL1 84 aa2.83□□□□□ -1.96
PDLIM5-211ENST00000508531 BRD3OSQ6XYD6 125 aa2.83□□□□□ -1.96
PDLIM5-211ENST00000508531 CAMK2N2Q96S95 79 aa2.83□□□□□ -1.96
PDLIM5-211ENST00000508531 STAB2Q8WWQ8 2551 aa2.82□□□□□ -1.96
PDLIM5-211ENST00000508531 IGLV8-61A0A075B6I0 122 aa2.82□□□□□ -1.96
PDLIM5-211ENST00000508531 UQCR11O14957 56 aa2.82□□□□□ -1.96
PDLIM5-211ENST00000508531 KRTAP10-1P60331 282 aa2.82□□□□□ -1.96
PDLIM5-211ENST00000508531 LELP1Q5T871 98 aa2.82□□□□□ -1.96
PDLIM5-211ENST00000508531 SPATA8Q6RVD6 105 aa2.82□□□□□ -1.96
PDLIM5-211ENST00000508531 WFDC10BQ8IUB3 73 aa2.82□□□□□ -1.96
PDLIM5-211ENST00000508531 WFDC13Q8IUB5 93 aa2.82□□□□□ -1.96
PDLIM5-211ENST00000508531 ZNF702PQ9H963 129 aa2.82□□□□□ -1.96
PDLIM5-211ENST00000508531 C6orf48Q9UBA6 75 aa2.82□□□□□ -1.96
PDLIM5-211ENST00000508531 UBR4Q5T4S7 5183 aa2.82□□□□□ -1.96
PDLIM5-211ENST00000508531 IGHV6-1A0A0B4J1U7 121 aa2.81□□□□□ -1.96
PDLIM5-211ENST00000508531 ACYP2P14621 99 aa2.81□□□□□ -1.96
PDLIM5-211ENST00000508531 Q8NDZ9 215 aa2.81□□□□□ -1.96
PDLIM5-211ENST00000508531 DEFB105AQ8NG35 78 aa2.81□□□□□ -1.96
PDLIM5-211ENST00000508531 HECTD4Q9Y4D8 3996 aa2.81□□□□□ -1.96
PDLIM5-211ENST00000508531 FRAS1Q86XX4 4008 aa2.81□□□□□ -1.96
PDLIM5-211ENST00000508531 DNAH7Q8WXX0 4024 aa2.81□□□□□ -1.96
PDLIM5-211ENST00000508531 TLX1NBP0CAT3 122 aa2.8□□□□□ -1.96
PDLIM5-211ENST00000508531 SPRR1AP35321 89 aa2.8□□□□□ -1.96
PDLIM5-211ENST00000508531 SPINK7P58062 85 aa2.8□□□□□ -1.96
PDLIM5-211ENST00000508531 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
PDLIM5-211ENST00000508531 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
PDLIM5-211ENST00000508531 CLPSL2Q6UWE3 100 aa2.8□□□□□ -1.96
PDLIM5-211ENST00000508531 CSNK1G2-AS1Q8NCQ2 148 aa2.8□□□□□ -1.96
PDLIM5-211ENST00000508531 KIAA1109Q2LD37 5005 aa2.8□□□□□ -1.96
PDLIM5-211ENST00000508531 ABCA13Q86UQ4 5058 aa2.79□□□□□ -1.96
PDLIM5-211ENST00000508531 IGLV10-54A0A075B6I4 117 aa2.79□□□□□ -1.96
PDLIM5-211ENST00000508531 A0A1B0GU69 56 aa2.79□□□□□ -1.96
PDLIM5-211ENST00000508531 IGLV1-51P01701 117 aa2.78□□□□□ -1.96
PDLIM5-211ENST00000508531 MIR22HGQ0VDD5 57 aa2.78□□□□□ -1.96
PDLIM5-211ENST00000508531 C7orf33Q8WU49 177 aa2.78□□□□□ -1.96
PDLIM5-211ENST00000508531 ZNF706Q9Y5V0 76 aaPredicted RBP2.78□□□□□ -1.96
PDLIM5-211ENST00000508531 STARD9Q9P2P6 4700 aa2.78□□□□□ -1.96
PDLIM5-211ENST00000508531 IGLV1-50A0A075B6I6 118 aa2.77□□□□□ -1.97
PDLIM5-211ENST00000508531 IGKV2-24A0A0C4DH68 120 aa2.77□□□□□ -1.97
PDLIM5-211ENST00000508531 KRTAP4-16G5E9R7 235 aaPredicted RBP2.77□□□□□ -1.97
PDLIM5-211ENST00000508531 DEFB130BP0DP73 79 aa2.77□□□□□ -1.97
PDLIM5-211ENST00000508531 DEFB130AP0DP74 79 aa2.77□□□□□ -1.97
PDLIM5-211ENST00000508531 HRES1P13985 223 aa2.77□□□□□ -1.97
PDLIM5-211ENST00000508531 RPL37AP61513 92 aaKnown RBP2.77□□□□□ -1.97
PDLIM5-211ENST00000508531 ANAPC11Q9NYG5 84 aa2.77□□□□□ -1.97
PDLIM5-211ENST00000508531 A0A087WSZ3 146 aa2.76□□□□□ -1.97
PDLIM5-211ENST00000508531 H3BNG1 76 aa2.76□□□□□ -1.97
PDLIM5-211ENST00000508531 REG3GQ6UW15 175 aa2.76□□□□□ -1.97
PDLIM5-211ENST00000508531 GIG44P09565 113 aaPredicted RBP2.75□□□□□ -1.97
PDLIM5-211ENST00000508531 ROMO1P60602 79 aa2.75□□□□□ -1.97
PDLIM5-211ENST00000508531 C1orf134Q5TEV5 83 aa2.75□□□□□ -1.97
PDLIM5-211ENST00000508531 CSAG1Q6PB30 78 aa2.75□□□□□ -1.97
PDLIM5-211ENST00000508531 IGFL1Q6UW32 110 aa2.75□□□□□ -1.97
PDLIM5-211ENST00000508531 LINC00472Q9H8W2 130 aa2.75□□□□□ -1.97
PDLIM5-211ENST00000508531 SORL1Q92673 2214 aa2.74□□□□□ -1.97
PDLIM5-211ENST00000508531 MMP24-AS1A0A0U1RRL7 71 aa2.74□□□□□ -1.97
PDLIM5-211ENST00000508531 SPRR1BP22528 89 aa2.74□□□□□ -1.97
PDLIM5-211ENST00000508531 DEFB136Q30KP8 78 aa2.74□□□□□ -1.97
PDLIM5-211ENST00000508531 HUWE1Q7Z6Z7 4374 aaKnown RBP2.74□□□□□ -1.97
PDLIM5-211ENST00000508531 HERC1Q15751 4861 aa2.73□□□□□ -1.97
PDLIM5-211ENST00000508531 SPART-AS1P0CW21 52 aa2.73□□□□□ -1.97
PDLIM5-211ENST00000508531 PCOTHQ58A44 107 aa2.73□□□□□ -1.97
PDLIM5-211ENST00000508531 C10orf99Q6UWK7 81 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms