RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 ANKRD29Q8N6D5 301 aa4.22□□□□□ -1.73
UBE2D3-222ENST00000508238 H3BUT2 72 aa4.2□□□□□ -1.74
UBE2D3-222ENST00000508238 TRACP01848 142 aa4.2□□□□□ -1.74
UBE2D3-222ENST00000508238 FAM218AQ96MZ4 157 aa4.2□□□□□ -1.74
UBE2D3-222ENST00000508238 FSIP2Q5CZC0 6907 aa4.19□□□□□ -1.74
UBE2D3-222ENST00000508238 TRBV7-4A0A0J9YYF1 115 aa4.19□□□□□ -1.74
UBE2D3-222ENST00000508238 M0R143 59 aa4.19□□□□□ -1.74
UBE2D3-222ENST00000508238 FLGP20930 4061 aaPredicted RBP4.19□□□□□ -1.74
UBE2D3-222ENST00000508238 RBM3P98179 157 aaKnown RBP4.18□□□□□ -1.74
UBE2D3-222ENST00000508238 DSCR8Q96T75 97 aa4.18□□□□□ -1.74
UBE2D3-222ENST00000508238 A0A087WSZ3 146 aa4.17□□□□□ -1.74
UBE2D3-222ENST00000508238 LYRM7Q5U5X0 104 aa4.17□□□□□ -1.74
UBE2D3-222ENST00000508238 OBSCN-AS1Q96MR7 158 aa4.17□□□□□ -1.74
UBE2D3-222ENST00000508238 A0A1B0GW54 56 aa4.16□□□□□ -1.74
UBE2D3-222ENST00000508238 Q96NJ1 140 aa4.16□□□□□ -1.74
UBE2D3-222ENST00000508238 JMJD7-PLA2G4BH0Y9G9 81 aa4.15□□□□□ -1.75
UBE2D3-222ENST00000508238 CCKP06307 115 aa4.15□□□□□ -1.75
UBE2D3-222ENST00000508238 BAALC-AS2P0C853 105 aa4.15□□□□□ -1.75
UBE2D3-222ENST00000508238 PDE6GP18545 87 aa4.15□□□□□ -1.75
UBE2D3-222ENST00000508238 C9JAW5 83 aa4.14□□□□□ -1.75
UBE2D3-222ENST00000508238 TSTD3H0UI37 97 aa4.14□□□□□ -1.75
UBE2D3-222ENST00000508238 K7ERJ3 54 aa4.14□□□□□ -1.75
UBE2D3-222ENST00000508238 SMIM6P0DI80 62 aa4.14□□□□□ -1.75
UBE2D3-222ENST00000508238 LINC00313P59037 77 aa4.14□□□□□ -1.75
UBE2D3-222ENST00000508238 KRTAP10-6P60371 365 aaPredicted RBP4.14□□□□□ -1.75
UBE2D3-222ENST00000508238 ATXN8Q156A1 80 aa4.14□□□□□ -1.75
UBE2D3-222ENST00000508238 COX6B2Q6YFQ2 88 aa4.14□□□□□ -1.75
UBE2D3-222ENST00000508238 C20orf166-AS1Q96NR2 134 aa4.14□□□□□ -1.75
UBE2D3-222ENST00000508238 TRBV20-1A0A075B6N2 111 aa4.13□□□□□ -1.75
UBE2D3-222ENST00000508238 A0A1W2PNM2 257 aa4.13□□□□□ -1.75
UBE2D3-222ENST00000508238 A8MUU9 505 aa4.13□□□□□ -1.75
UBE2D3-222ENST00000508238 J3KT08 172 aa4.13□□□□□ -1.75
UBE2D3-222ENST00000508238 IGKV4-1P06312 121 aa4.13□□□□□ -1.75
UBE2D3-222ENST00000508238 M0R2T5 61 aa4.11□□□□□ -1.75
UBE2D3-222ENST00000508238 NDUFB1O75438 58 aa4.11□□□□□ -1.75
UBE2D3-222ENST00000508238 SIGMAR1Q99720 223 aa4.11□□□□□ -1.75
UBE2D3-222ENST00000508238 CRCT1Q9UGL9 99 aa4.11□□□□□ -1.75
UBE2D3-222ENST00000508238 VPS25Q9BRG1 176 aa4.1□□□□□ -1.75
UBE2D3-222ENST00000508238 C8orf87E5RJ46 101 aa4.09□□□□□ -1.75
UBE2D3-222ENST00000508238 LINC00472Q9H8W2 130 aa4.09□□□□□ -1.75
UBE2D3-222ENST00000508238 A0A1B0GV72 72 aa4.07□□□□□ -1.76
UBE2D3-222ENST00000508238 DSCR10P59022 87 aa4.07□□□□□ -1.76
UBE2D3-222ENST00000508238 LOC110117498A0A087WWA1 95 aa4.06□□□□□ -1.76
UBE2D3-222ENST00000508238 IGHV6-1A0A0B4J1U7 121 aa4.06□□□□□ -1.76
UBE2D3-222ENST00000508238 KRTAP16-1A8MUX0 517 aa4.06□□□□□ -1.76
UBE2D3-222ENST00000508238 Q6ZQT0 140 aa4.06□□□□□ -1.76
UBE2D3-222ENST00000508238 MTURNQ8N3F0 131 aa4.06□□□□□ -1.76
UBE2D3-222ENST00000508238 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
UBE2D3-222ENST00000508238 A0A1B0GVX0 72 aa4.04□□□□□ -1.76
UBE2D3-222ENST00000508238 MT3P25713 68 aa4.04□□□□□ -1.76
UBE2D3-222ENST00000508238 NREPQ16612 68 aa4.04□□□□□ -1.76
UBE2D3-222ENST00000508238 NOTCH2NLQ7Z3S9 236 aa4.04□□□□□ -1.76
UBE2D3-222ENST00000508238 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
UBE2D3-222ENST00000508238 RBM12B-AS1Q9P1G2 102 aa4.04□□□□□ -1.76
UBE2D3-222ENST00000508238 BATFQ16520 125 aa4.03□□□□□ -1.76
UBE2D3-222ENST00000508238 DEFB116Q30KQ4 102 aa4.03□□□□□ -1.76
UBE2D3-222ENST00000508238 H3BT86 120 aa4.02□□□□□ -1.77
UBE2D3-222ENST00000508238 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
UBE2D3-222ENST00000508238 A8MWP4 228 aa4.01□□□□□ -1.77
UBE2D3-222ENST00000508238 FAM236DA0A1B0GTK5 79 aa3.99□□□□□ -1.77
UBE2D3-222ENST00000508238 A0A1W2PPM0 123 aa3.99□□□□□ -1.77
UBE2D3-222ENST00000508238 FAM236CP0DP71 79 aa3.99□□□□□ -1.77
UBE2D3-222ENST00000508238 HRES1P13985 223 aa3.99□□□□□ -1.77
UBE2D3-222ENST00000508238 NAA38Q9BRA0 125 aaKnown RBP3.99□□□□□ -1.77
UBE2D3-222ENST00000508238 C14orf132Q9NPU4 83 aa3.99□□□□□ -1.77
UBE2D3-222ENST00000508238 LOC105371267A0A1B0GV96 52 aa3.97□□□□□ -1.77
UBE2D3-222ENST00000508238 COL5A1-AS1Q5SY13 56 aa3.97□□□□□ -1.77
UBE2D3-222ENST00000508238 PRR15Q8IV56 129 aa3.97□□□□□ -1.77
UBE2D3-222ENST00000508238 ZCCHC13Q8WW36 166 aaKnown RBP3.97□□□□□ -1.77
UBE2D3-222ENST00000508238 KRTAP10-7P60409 375 aaPredicted RBP3.96□□□□□ -1.78
UBE2D3-222ENST00000508238 Q6ZVQ6 151 aa3.96□□□□□ -1.78
UBE2D3-222ENST00000508238 C8orf17Q9NRJ1 99 aa3.96□□□□□ -1.78
UBE2D3-222ENST00000508238 BPY2O14599 106 aa3.95□□□□□ -1.78
UBE2D3-222ENST00000508238 TAX1BP3O14907 124 aa3.95□□□□□ -1.78
UBE2D3-222ENST00000508238 SPCS1Q9Y6A9 102 aa3.95□□□□□ -1.78
UBE2D3-222ENST00000508238 IGKV3D-7A0A0C4DH55 119 aa3.93□□□□□ -1.78
UBE2D3-222ENST00000508238 MT2AP02795 61 aa3.93□□□□□ -1.78
UBE2D3-222ENST00000508238 SPINK7P58062 85 aa3.93□□□□□ -1.78
UBE2D3-222ENST00000508238 GTF2H5Q6ZYL4 71 aa3.93□□□□□ -1.78
UBE2D3-222ENST00000508238 TMEM254Q8TBM7 123 aa3.93□□□□□ -1.78
UBE2D3-222ENST00000508238 MRPL34Q9BQ48 92 aaKnown RBP3.93□□□□□ -1.78
UBE2D3-222ENST00000508238 hDV103S1A0JD37 113 aa3.92□□□□□ -1.78
UBE2D3-222ENST00000508238 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
UBE2D3-222ENST00000508238 WFDC13Q8IUB5 93 aa3.92□□□□□ -1.78
UBE2D3-222ENST00000508238 UBL5Q9BZL1 73 aa3.92□□□□□ -1.78
UBE2D3-222ENST00000508238 NDUFS5O43920 106 aa3.91□□□□□ -1.78
UBE2D3-222ENST00000508238 USH2AO75445 5202 aa3.89□□□□□ -1.79
UBE2D3-222ENST00000508238 F8W1H4 67 aa3.89□□□□□ -1.79
UBE2D3-222ENST00000508238 MT1FP04733 61 aa3.89□□□□□ -1.79
UBE2D3-222ENST00000508238 SSPOA2VEC9 5147 aa3.88□□□□□ -1.79
UBE2D3-222ENST00000508238 K7EP34 96 aa3.87□□□□□ -1.79
UBE2D3-222ENST00000508238 CXCL6P80162 114 aa3.87□□□□□ -1.79
UBE2D3-222ENST00000508238 MMP24-AS1A0A0U1RRL7 71 aa3.86□□□□□ -1.79
UBE2D3-222ENST00000508238 K7EQZ3 153 aa3.86□□□□□ -1.79
UBE2D3-222ENST00000508238 KRTAP10-10P60014 251 aa3.86□□□□□ -1.79
UBE2D3-222ENST00000508238 CASC2Q6XLA1 102 aa3.86□□□□□ -1.79
UBE2D3-222ENST00000508238 TP53AIP1Q9HCN2 124 aa3.84□□□□□ -1.79
UBE2D3-222ENST00000508238 NDUFAF8A1L188 74 aa3.83□□□□□ -1.8
UBE2D3-222ENST00000508238 C7orf65Q6ZTY9 151 aa3.83□□□□□ -1.8
UBE2D3-222ENST00000508238 HCG22E2RYF7 251 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms