RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 MDFIQ99750 246 aa8□□□□□ -1.13
SNCAIP-209ENST00000508017 STARD9Q9P2P6 4700 aa8□□□□□ -1.13
SNCAIP-209ENST00000508017 CDK2AP2O75956 126 aa7.99□□□□□ -1.13
SNCAIP-209ENST00000508017 PSORS1C2Q9UIG4 136 aa7.99□□□□□ -1.13
SNCAIP-209ENST00000508017 DNAH17Q9UFH2 4485 aa7.98□□□□□ -1.13
SNCAIP-209ENST00000508017 PLAC8Q9NZF1 115 aa7.98□□□□□ -1.13
SNCAIP-209ENST00000508017 LINC01558Q9Y6Z2 57 aa7.98□□□□□ -1.13
SNCAIP-209ENST00000508017 DNAH2Q9P225 4427 aa7.98□□□□□ -1.13
SNCAIP-209ENST00000508017 ZNF706Q9Y5V0 76 aaPredicted RBP7.95□□□□□ -1.14
SNCAIP-209ENST00000508017 IGLV5-52A0A0A0MRZ9 124 aa7.95□□□□□ -1.14
SNCAIP-209ENST00000508017 ATP11AUNQ6ZP68 121 aa7.95□□□□□ -1.14
SNCAIP-209ENST00000508017 Q5W150 140 aa7.94□□□□□ -1.14
SNCAIP-209ENST00000508017 SPINK6Q6UWN8 80 aa7.94□□□□□ -1.14
SNCAIP-209ENST00000508017 FBN3Q75N90 2809 aa7.94□□□□□ -1.14
SNCAIP-209ENST00000508017 A0A087WTM6 91 aa7.93□□□□□ -1.14
SNCAIP-209ENST00000508017 CDC42SE1Q9NRR8 79 aa7.93□□□□□ -1.14
SNCAIP-209ENST00000508017 SPINK7P58062 85 aa7.93□□□□□ -1.14
SNCAIP-209ENST00000508017 ALMS1Q8TCU4 4167 aa7.93□□□□□ -1.14
SNCAIP-209ENST00000508017 KMT2AQ03164 3969 aa7.92□□□□□ -1.14
SNCAIP-209ENST00000508017 KTN1-AS1Q86SY8 53 aa7.92□□□□□ -1.14
SNCAIP-209ENST00000508017 A6NN06 94 aa7.91□□□□□ -1.14
SNCAIP-209ENST00000508017 RTL8CO15255 209 aa7.91□□□□□ -1.14
SNCAIP-209ENST00000508017 ZNF861PO60384 105 aa7.91□□□□□ -1.14
SNCAIP-209ENST00000508017 PRKDCP78527 4128 aaKnown RBP7.91□□□□□ -1.14
SNCAIP-209ENST00000508017 PRR26Q8N8Z3 221 aa7.9□□□□□ -1.14
SNCAIP-209ENST00000508017 KRTAP13-3Q3SY46 172 aa7.89□□□□□ -1.15
SNCAIP-209ENST00000508017 NUPR2A6NF83 97 aa7.88□□□□□ -1.15
SNCAIP-209ENST00000508017 CIRBP-AS1Q8TBR5 109 aa7.87□□□□□ -1.15
SNCAIP-209ENST00000508017 MEGF8Q7Z7M0 2845 aa7.86□□□□□ -1.15
SNCAIP-209ENST00000508017 TGP01266 2768 aa7.85□□□□□ -1.15
SNCAIP-209ENST00000508017 DNAH6Q9C0G6 4158 aa7.82□□□□□ -1.16
SNCAIP-209ENST00000508017 DNAH11Q96DT5 4516 aa7.81□□□□□ -1.16
SNCAIP-209ENST00000508017 RBM12B-AS1Q9P1G2 102 aa7.81□□□□□ -1.16
SNCAIP-209ENST00000508017 IGLV7-43P04211 117 aa7.8□□□□□ -1.16
SNCAIP-209ENST00000508017 RETNLBQ9BQ08 111 aa7.8□□□□□ -1.16
SNCAIP-209ENST00000508017 ACYP2P14621 99 aa7.78□□□□□ -1.16
SNCAIP-209ENST00000508017 DNAH5Q8TE73 4624 aa7.76□□□□□ -1.17
SNCAIP-209ENST00000508017 C7orf65Q6ZTY9 151 aa7.76□□□□□ -1.17
SNCAIP-209ENST00000508017 DMAC1Q96GE9 116 aa7.75□□□□□ -1.17
SNCAIP-209ENST00000508017 C8orf87E5RJ46 101 aa7.74□□□□□ -1.17
SNCAIP-209ENST00000508017 LINC00313P59037 77 aa7.73□□□□□ -1.17
SNCAIP-209ENST00000508017 SSBP3-AS1Q7Z2R9 100 aa7.71□□□□□ -1.17
SNCAIP-209ENST00000508017 FAM229AH3BQW9 127 aa7.7□□□□□ -1.18
SNCAIP-209ENST00000508017 IGKV2-30P06310 120 aa7.69□□□□□ -1.18
SNCAIP-209ENST00000508017 LRP1BQ9NZR2 4599 aa7.68□□□□□ -1.18
SNCAIP-209ENST00000508017 KRTAP13-2Q52LG2 175 aa7.68□□□□□ -1.18
SNCAIP-209ENST00000508017 C1orf134Q5TEV5 83 aa7.68□□□□□ -1.18
SNCAIP-209ENST00000508017 A0A1B0GU69 56 aa7.66□□□□□ -1.18
SNCAIP-209ENST00000508017 KRTAP16-1A8MUX0 517 aa7.65□□□□□ -1.18
SNCAIP-209ENST00000508017 KRTAP10-2P60368 255 aa7.63□□□□□ -1.19
SNCAIP-209ENST00000508017 PRAC1Q96KF2 57 aa7.62□□□□□ -1.19
SNCAIP-209ENST00000508017 IGKV2D-30A0A075B6S6 120 aa7.61□□□□□ -1.19
SNCAIP-209ENST00000508017 ADM2Q7Z4H4 148 aa7.61□□□□□ -1.19
SNCAIP-209ENST00000508017 PKD1P98161 4303 aa7.6□□□□□ -1.19
SNCAIP-209ENST00000508017 LY6G6CO95867 125 aa7.59□□□□□ -1.19
SNCAIP-209ENST00000508017 SPATA8Q6RVD6 105 aa7.58□□□□□ -1.2
SNCAIP-209ENST00000508017 VPS13BQ7Z7G8 4022 aa7.57□□□□□ -1.2
SNCAIP-209ENST00000508017 MIR22HGQ0VDD5 57 aa7.55□□□□□ -1.2
SNCAIP-209ENST00000508017 KRTAP1-4P0C5Y4 121 aa7.53□□□□□ -1.2
SNCAIP-209ENST00000508017 FAT2Q9NYQ8 4349 aa7.53□□□□□ -1.2
SNCAIP-209ENST00000508017 UQCR11O14957 56 aa7.52□□□□□ -1.2
SNCAIP-209ENST00000508017 KRTAP10-1P60331 282 aa7.52□□□□□ -1.2
SNCAIP-209ENST00000508017 PLA2G1BP04054 148 aaKnown RBP7.51□□□□□ -1.21
SNCAIP-209ENST00000508017 HYDINQ4G0P3 5121 aa7.49□□□□□ -1.21
SNCAIP-209ENST00000508017 Q6ZSA8 131 aa7.49□□□□□ -1.21
SNCAIP-209ENST00000508017 DNHD1Q96M86 4753 aa7.48□□□□□ -1.21
SNCAIP-209ENST00000508017 SPINK1P00995 79 aa7.48□□□□□ -1.21
SNCAIP-209ENST00000508017 Q8N1X5 172 aa7.47□□□□□ -1.21
SNCAIP-209ENST00000508017 C4orf48Q5BLP8 95 aa7.43□□□□□ -1.22
SNCAIP-209ENST00000508017 TYMSOSQ8TAI1 123 aa7.43□□□□□ -1.22
SNCAIP-209ENST00000508017 PKHD1P08F94 4074 aa7.38□□□□□ -1.23
SNCAIP-209ENST00000508017 LINC01554Q52M75 96 aa7.37□□□□□ -1.23
SNCAIP-209ENST00000508017 CSAG1Q6PB30 78 aa7.35□□□□□ -1.23
SNCAIP-209ENST00000508017 SACSQ9NZJ4 4579 aa7.34□□□□□ -1.23
SNCAIP-209ENST00000508017 LINC00304Q8N9R0 145 aa7.31□□□□□ -1.24
SNCAIP-209ENST00000508017 H0YAA0 97 aa7.3□□□□□ -1.24
SNCAIP-209ENST00000508017 C9orf92A6NGG3 77 aa7.29□□□□□ -1.24
SNCAIP-209ENST00000508017 KRTAP3-1Q9BYR8 98 aa7.27□□□□□ -1.25
SNCAIP-209ENST00000508017 PKHD1L1Q86WI1 4243 aa7.25□□□□□ -1.25
SNCAIP-209ENST00000508017 FAT1Q14517 4588 aa7.24□□□□□ -1.25
SNCAIP-209ENST00000508017 DYNC1H1Q14204 4646 aaKnown RBP7.23□□□□□ -1.25
SNCAIP-209ENST00000508017 RPS29P62273 56 aaKnown RBP7.22□□□□□ -1.25
SNCAIP-209ENST00000508017 A8MUU9 505 aa7.22□□□□□ -1.25
SNCAIP-209ENST00000508017 C20orf166-AS1Q96NR2 134 aa7.21□□□□□ -1.26
SNCAIP-209ENST00000508017 SMR3BP02814 79 aaPredicted RBP7.2□□□□□ -1.26
SNCAIP-209ENST00000508017 APOBP04114 4563 aaKnown RBP7.2□□□□□ -1.26
SNCAIP-209ENST00000508017 A0A1B0GU33 70 aa7.19□□□□□ -1.26
SNCAIP-209ENST00000508017 H1FX-AS1Q4G0G2 97 aa7.17□□□□□ -1.26
SNCAIP-209ENST00000508017 FLG2Q5D862 2391 aaPredicted RBP7.1□□□□□ -1.27
SNCAIP-209ENST00000508017 KRTAP25-1Q3LHN0 102 aa7.09□□□□□ -1.27
SNCAIP-209ENST00000508017 KRTAP10-4P60372 401 aaPredicted RBP7.06□□□□□ -1.28
SNCAIP-209ENST00000508017 COX6B2Q6YFQ2 88 aa7.06□□□□□ -1.28
SNCAIP-209ENST00000508017 CRIPTQ9P021 101 aa7.05□□□□□ -1.28
SNCAIP-209ENST00000508017 FAT3Q8TDW7 4589 aa7.02□□□□□ -1.29
SNCAIP-209ENST00000508017 HSPG2P98160 4391 aa7.01□□□□□ -1.29
SNCAIP-209ENST00000508017 H3BS24 57 aa6.97□□□□□ -1.29
SNCAIP-209ENST00000508017 LRP1Q07954 4544 aaKnown RBP6.97□□□□□ -1.29
SNCAIP-209ENST00000508017 K7ERS5 55 aa6.96□□□□□ -1.3
SNCAIP-209ENST00000508017 A0A1B0GVY2 172 aa6.95□□□□□ -1.3
SNCAIP-209ENST00000508017 DMBT1Q9UGM3 2413 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms