RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 LINC00313P59037 77 aa10.15□□□□□ -0.78
SQSTM1-211ENST00000506690 ACYP2P14621 99 aa10.13□□□□□ -0.79
SQSTM1-211ENST00000506690 UBE2DNLQ8IWF7 75 aa10.11□□□□□ -0.79
SQSTM1-211ENST00000506690 ZNF706Q9Y5V0 76 aaPredicted RBP10.11□□□□□ -0.79
SQSTM1-211ENST00000506690 SPACA4Q8TDM5 124 aa10.08□□□□□ -0.8
SQSTM1-211ENST00000506690 C8orf87E5RJ46 101 aa10.07□□□□□ -0.8
SQSTM1-211ENST00000506690 PRAC1Q96KF2 57 aa10.07□□□□□ -0.8
SQSTM1-211ENST00000506690 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.07□□□□□ -0.8
SQSTM1-211ENST00000506690 PLA2G1BP04054 148 aaKnown RBP10.07□□□□□ -0.8
SQSTM1-211ENST00000506690 DMAC1Q96GE9 116 aa10.07□□□□□ -0.8
SQSTM1-211ENST00000506690 APLNQ9ULZ1 77 aa10.06□□□□□ -0.8
SQSTM1-211ENST00000506690 DNAH7Q8WXX0 4024 aa10.05□□□□□ -0.8
SQSTM1-211ENST00000506690 ANAPC11Q9NYG5 84 aa10.04□□□□□ -0.8
SQSTM1-211ENST00000506690 DNAH8Q96JB1 4490 aa10.02□□□□□ -0.8
SQSTM1-211ENST00000506690 STAB2Q8WWQ8 2551 aa10.02□□□□□ -0.8
SQSTM1-211ENST00000506690 SPATA8Q6RVD6 105 aa10.02□□□□□ -0.81
SQSTM1-211ENST00000506690 ADM2Q7Z4H4 148 aa10.02□□□□□ -0.81
SQSTM1-211ENST00000506690 Q6ZRN7 208 aaPredicted RBP10.01□□□□□ -0.81
SQSTM1-211ENST00000506690 DNHD1Q96M86 4753 aa10.01□□□□□ -0.81
SQSTM1-211ENST00000506690 SPINK6Q6UWN8 80 aa10.01□□□□□ -0.81
SQSTM1-211ENST00000506690 DYNC2H1Q8NCM8 4307 aaKnown RBP10□□□□□ -0.81
SQSTM1-211ENST00000506690 A0A1B0GU69 56 aa10□□□□□ -0.81
SQSTM1-211ENST00000506690 PSORS1C2Q9UIG4 136 aa9.99□□□□□ -0.81
SQSTM1-211ENST00000506690 IGLV5-52A0A0A0MRZ9 124 aa9.99□□□□□ -0.81
SQSTM1-211ENST00000506690 RTL8CO15255 209 aa9.98□□□□□ -0.81
SQSTM1-211ENST00000506690 FRAS1Q86XX4 4008 aa9.98□□□□□ -0.81
SQSTM1-211ENST00000506690 NBDYA0A0U1RRE5 68 aa9.97□□□□□ -0.81
SQSTM1-211ENST00000506690 ZNF861PO60384 105 aa9.97□□□□□ -0.81
SQSTM1-211ENST00000506690 LINC01554Q52M75 96 aa9.93□□□□□ -0.82
SQSTM1-211ENST00000506690 NUPR2A6NF83 97 aa9.91□□□□□ -0.82
SQSTM1-211ENST00000506690 FAM229AH3BQW9 127 aa9.91□□□□□ -0.82
SQSTM1-211ENST00000506690 MIR22HGQ0VDD5 57 aa9.91□□□□□ -0.82
SQSTM1-211ENST00000506690 PLECQ15149 4684 aaKnown RBP9.9□□□□□ -0.82
SQSTM1-211ENST00000506690 UQCR11O14957 56 aa9.9□□□□□ -0.83
SQSTM1-211ENST00000506690 IGKV2-30P06310 120 aa9.89□□□□□ -0.83
SQSTM1-211ENST00000506690 HECTD4Q9Y4D8 3996 aa9.88□□□□□ -0.83
SQSTM1-211ENST00000506690 MEGF8Q7Z7M0 2845 aa9.88□□□□□ -0.83
SQSTM1-211ENST00000506690 KRTAP21-3Q3LHN1 58 aa9.87□□□□□ -0.83
SQSTM1-211ENST00000506690 CIRBP-AS1Q8TBR5 109 aa9.87□□□□□ -0.83
SQSTM1-211ENST00000506690 A0A087WTM6 91 aa9.84□□□□□ -0.83
SQSTM1-211ENST00000506690 PRKDCP78527 4128 aaKnown RBP9.83□□□□□ -0.84
SQSTM1-211ENST00000506690 C4orf48Q5BLP8 95 aa9.83□□□□□ -0.84
SQSTM1-211ENST00000506690 RETNLBQ9BQ08 111 aa9.83□□□□□ -0.84
SQSTM1-211ENST00000506690 SSBP3-AS1Q7Z2R9 100 aa9.8□□□□□ -0.84
SQSTM1-211ENST00000506690 DNAH17Q9UFH2 4485 aa9.79□□□□□ -0.84
SQSTM1-211ENST00000506690 IGLV7-43P04211 117 aa9.78□□□□□ -0.84
SQSTM1-211ENST00000506690 VPS13DQ5THJ4 4388 aa9.75□□□□□ -0.85
SQSTM1-211ENST00000506690 KRTAP16-1A8MUX0 517 aa9.74□□□□□ -0.85
SQSTM1-211ENST00000506690 STARD9Q9P2P6 4700 aa9.74□□□□□ -0.85
SQSTM1-211ENST00000506690 CSAG1Q6PB30 78 aa9.73□□□□□ -0.85
SQSTM1-211ENST00000506690 FBN3Q75N90 2809 aa9.7□□□□□ -0.86
SQSTM1-211ENST00000506690 IGKV2D-30A0A075B6S6 120 aa9.67□□□□□ -0.86
SQSTM1-211ENST00000506690 DNAH2Q9P225 4427 aa9.67□□□□□ -0.86
SQSTM1-211ENST00000506690 TGP01266 2768 aa9.61□□□□□ -0.87
SQSTM1-211ENST00000506690 KRTAP13-2Q52LG2 175 aa9.61□□□□□ -0.87
SQSTM1-211ENST00000506690 LY6G6CO95867 125 aa9.6□□□□□ -0.87
SQSTM1-211ENST00000506690 KMT2AQ03164 3969 aa9.59□□□□□ -0.87
SQSTM1-211ENST00000506690 H3BS24 57 aa9.59□□□□□ -0.87
SQSTM1-211ENST00000506690 C1orf134Q5TEV5 83 aa9.55□□□□□ -0.88
SQSTM1-211ENST00000506690 DNAH11Q96DT5 4516 aa9.55□□□□□ -0.88
SQSTM1-211ENST00000506690 SPINK1P00995 79 aa9.54□□□□□ -0.88
SQSTM1-211ENST00000506690 A8MUU9 505 aa9.51□□□□□ -0.89
SQSTM1-211ENST00000506690 DNAH6Q9C0G6 4158 aa9.5□□□□□ -0.89
SQSTM1-211ENST00000506690 Q6ZSA8 131 aa9.5□□□□□ -0.89
SQSTM1-211ENST00000506690 H0YAA0 97 aa9.49□□□□□ -0.89
SQSTM1-211ENST00000506690 Q8N1X5 172 aa9.49□□□□□ -0.89
SQSTM1-211ENST00000506690 DNAH5Q8TE73 4624 aa9.44□□□□□ -0.9
SQSTM1-211ENST00000506690 KRTAP25-1Q3LHN0 102 aa9.43□□□□□ -0.9
SQSTM1-211ENST00000506690 LINC00304Q8N9R0 145 aa9.43□□□□□ -0.9
SQSTM1-211ENST00000506690 KRTAP1-4P0C5Y4 121 aa9.42□□□□□ -0.9
SQSTM1-211ENST00000506690 TYMSOSQ8TAI1 123 aa9.39□□□□□ -0.91
SQSTM1-211ENST00000506690 LRP1BQ9NZR2 4599 aa9.38□□□□□ -0.91
SQSTM1-211ENST00000506690 KRTAP10-2P60368 255 aa9.35□□□□□ -0.91
SQSTM1-211ENST00000506690 A0A1B0GU33 70 aa9.35□□□□□ -0.91
SQSTM1-211ENST00000506690 ROMO1P60602 79 aa9.32□□□□□ -0.92
SQSTM1-211ENST00000506690 H1FX-AS1Q4G0G2 97 aa9.31□□□□□ -0.92
SQSTM1-211ENST00000506690 HYDINQ4G0P3 5121 aa9.3□□□□□ -0.92
SQSTM1-211ENST00000506690 KRTAP3-1Q9BYR8 98 aa9.27□□□□□ -0.93
SQSTM1-211ENST00000506690 VPS13BQ7Z7G8 4022 aa9.27□□□□□ -0.93
SQSTM1-211ENST00000506690 KRTAP10-1P60331 282 aa9.23□□□□□ -0.93
SQSTM1-211ENST00000506690 PKD1P98161 4303 aa9.22□□□□□ -0.93
SQSTM1-211ENST00000506690 RPS29P62273 56 aaKnown RBP9.18□□□□□ -0.94
SQSTM1-211ENST00000506690 FAT2Q9NYQ8 4349 aa9.16□□□□□ -0.94
SQSTM1-211ENST00000506690 C20orf166-AS1Q96NR2 134 aa9.16□□□□□ -0.94
SQSTM1-211ENST00000506690 FLG2Q5D862 2391 aaPredicted RBP9.14□□□□□ -0.95
SQSTM1-211ENST00000506690 K7ERS5 55 aa9.14□□□□□ -0.95
SQSTM1-211ENST00000506690 CRIPTQ9P021 101 aa9.12□□□□□ -0.95
SQSTM1-211ENST00000506690 COX6B2Q6YFQ2 88 aa9.12□□□□□ -0.95
SQSTM1-211ENST00000506690 SACSQ9NZJ4 4579 aa9.1□□□□□ -0.95
SQSTM1-211ENST00000506690 C9orf92A6NGG3 77 aa9.07□□□□□ -0.96
SQSTM1-211ENST00000506690 P0C880 135 aa9.06□□□□□ -0.96
SQSTM1-211ENST00000506690 KMT2CQ8NEZ4 4911 aaKnown RBP8.95□□□□□ -0.98
SQSTM1-211ENST00000506690 A0A1B0GVY2 172 aa8.95□□□□□ -0.98
SQSTM1-211ENST00000506690 RPL37P61927 97 aaKnown RBP8.95□□□□□ -0.98
SQSTM1-211ENST00000506690 PKHD1P08F94 4074 aa8.94□□□□□ -0.98
SQSTM1-211ENST00000506690 PKHD1L1Q86WI1 4243 aa8.94□□□□□ -0.98
SQSTM1-211ENST00000506690 SMR3BP02814 79 aaPredicted RBP8.92□□□□□ -0.98
SQSTM1-211ENST00000506690 KRTAP10-6P60371 365 aaPredicted RBP8.92□□□□□ -0.98
SQSTM1-211ENST00000506690 RYR2Q92736 4967 aa8.91□□□□□ -0.98
SQSTM1-211ENST00000506690 TPRXLQ17RH7 258 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms