RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 A0A1B0GUT8 65 aa-0.24□□□□□ -2.45
GYPB-207ENST00000506679 H0YAA0 97 aa-0.24□□□□□ -2.45
GYPB-207ENST00000506679 MT1HL1P0DM35 61 aa-0.24□□□□□ -2.45
GYPB-207ENST00000506679 DEFB110Q30KQ9 67 aa-0.24□□□□□ -2.45
GYPB-207ENST00000506679 COX6B2Q6YFQ2 88 aa-0.24□□□□□ -2.45
GYPB-207ENST00000506679 KRTAP8-1Q8IUC2 63 aa-0.24□□□□□ -2.45
GYPB-207ENST00000506679 DIP2AQ14689 1571 aa-0.24□□□□□ -2.45
GYPB-207ENST00000506679 SUPT6HQ7KZ85 1726 aaKnown RBP-0.24□□□□□ -2.45
GYPB-207ENST00000506679 C9orf92A6NGG3 77 aa-0.25□□□□□ -2.45
GYPB-207ENST00000506679 CYB5AP00167 134 aa-0.25□□□□□ -2.45
GYPB-207ENST00000506679 MT1AP04731 61 aa-0.25□□□□□ -2.45
GYPB-207ENST00000506679 MT1BP07438 61 aa-0.25□□□□□ -2.45
GYPB-207ENST00000506679 COX7BP24311 80 aa-0.25□□□□□ -2.45
GYPB-207ENST00000506679 MT1HP80294 61 aa-0.25□□□□□ -2.45
GYPB-207ENST00000506679 PYY3Q5JQD4 70 aa-0.25□□□□□ -2.45
GYPB-207ENST00000506679 C20orf78Q9BR46 151 aa-0.25□□□□□ -2.45
GYPB-207ENST00000506679 ATP7BP35670 1465 aa-0.25□□□□□ -2.45
GYPB-207ENST00000506679 LRRC9Q6ZRR7 1453 aa-0.25□□□□□ -2.45
GYPB-207ENST00000506679 TTC37Q6PGP7 1564 aa-0.25□□□□□ -2.45
GYPB-207ENST00000506679 WIZO95785 1651 aa-0.25□□□□□ -2.45
GYPB-207ENST00000506679 ZC3H13Q5T200 1668 aaKnown RBP-0.25□□□□□ -2.45
GYPB-207ENST00000506679 CFAP43Q8NDM7 1665 aa-0.25□□□□□ -2.45
GYPB-207ENST00000506679 RGPD1P0DJD0 1748 aa-0.26□□□□□ -2.45
GYPB-207ENST00000506679 PTPN23Q9H3S7 1636 aa-0.26□□□□□ -2.45
GYPB-207ENST00000506679 THOC2Q8NI27 1593 aaKnown RBP-0.26□□□□□ -2.45
GYPB-207ENST00000506679 ABCC3O15438 1527 aa-0.26□□□□□ -2.45
GYPB-207ENST00000506679 WFDC13Q8IUB5 93 aa-0.26□□□□□ -2.45
GYPB-207ENST00000506679 Q9H521 79 aa-0.26□□□□□ -2.45
GYPB-207ENST00000506679 PPLO60437 1756 aa-0.27□□□□□ -2.45
GYPB-207ENST00000506679 LTN1O94822 1766 aa-0.27□□□□□ -2.45
GYPB-207ENST00000506679 EEA1Q15075 1411 aa-0.27□□□□□ -2.45
GYPB-207ENST00000506679 PLIN4Q96Q06 1357 aa-0.27□□□□□ -2.45
GYPB-207ENST00000506679 MT1XP80297 61 aa-0.27□□□□□ -2.45
GYPB-207ENST00000506679 CLPSL2Q6UWE3 100 aa-0.27□□□□□ -2.45
GYPB-207ENST00000506679 S4R3F8 94 aa-0.27□□□□□ -2.45
GYPB-207ENST00000506679 V9GYS6 101 aa-0.27□□□□□ -2.45
GYPB-207ENST00000506679 NEXMIFQ5QGS0 1516 aa-0.28□□□□□ -2.45
GYPB-207ENST00000506679 PVALEFA0A1B0GWK0 134 aa-0.28□□□□□ -2.45
GYPB-207ENST00000506679 IQCF6A8MYZ5 107 aa-0.28□□□□□ -2.45
GYPB-207ENST00000506679 SNRPFP62306 86 aaKnown RBP-0.28□□□□□ -2.45
GYPB-207ENST00000506679 GAFA1Q96PS6 74 aa-0.28□□□□□ -2.45
GYPB-207ENST00000506679 POLR1AO95602 1720 aaPredicted RBP-0.28□□□□□ -2.45
GYPB-207ENST00000506679 C4AP0C0L4 1744 aa-0.29□□□□□ -2.46
GYPB-207ENST00000506679 C4BP0C0L5 1744 aa-0.29□□□□□ -2.46
GYPB-207ENST00000506679 MYMXA0A1B0GTQ4 84 aa-0.29□□□□□ -2.46
GYPB-207ENST00000506679 NDUFB1O75438 58 aa-0.29□□□□□ -2.46
GYPB-207ENST00000506679 RABAC1Q9UI14 185 aa-0.29□□□□□ -2.46
GYPB-207ENST00000506679 ERVK-7P63135 1459 aa-0.29□□□□□ -2.46
GYPB-207ENST00000506679 USP32Q8NFA0 1604 aa-0.3□□□□□ -2.46
GYPB-207ENST00000506679 CDC42BPGQ6DT37 1551 aa-0.3□□□□□ -2.46
GYPB-207ENST00000506679 UGGT1Q9NYU2 1555 aa-0.3□□□□□ -2.46
GYPB-207ENST00000506679 MT2AP02795 61 aa-0.3□□□□□ -2.46
GYPB-207ENST00000506679 ACYP1P07311 99 aa-0.3□□□□□ -2.46
GYPB-207ENST00000506679 MT1GP13640 62 aa-0.3□□□□□ -2.46
GYPB-207ENST00000506679 LINC00643Q86TS7 51 aa-0.3□□□□□ -2.46
GYPB-207ENST00000506679 MT1MQ8N339 61 aa-0.3□□□□□ -2.46
GYPB-207ENST00000506679 WFDC9Q8NEX5 89 aa-0.3□□□□□ -2.46
GYPB-207ENST00000506679 S100A16Q96FQ6 103 aaKnown RBP-0.3□□□□□ -2.46
GYPB-207ENST00000506679 KIF14Q15058 1648 aa-0.31□□□□□ -2.46
GYPB-207ENST00000506679 DEFB4AO15263 64 aa-0.31□□□□□ -2.46
GYPB-207ENST00000506679 MT1EP04732 61 aa-0.31□□□□□ -2.46
GYPB-207ENST00000506679 DEFB104AQ8WTQ1 72 aa-0.31□□□□□ -2.46
GYPB-207ENST00000506679 MAP3K1Q13233 1512 aa-0.32□□□□□ -2.46
GYPB-207ENST00000506679 CDC42BPAQ5VT25 1732 aa-0.32□□□□□ -2.46
GYPB-207ENST00000506679 TRAV21A0A0B4J279 112 aa-0.32□□□□□ -2.46
GYPB-207ENST00000506679 MMP24-AS1A0A0U1RRL7 71 aa-0.32□□□□□ -2.46
GYPB-207ENST00000506679 LINC01546A6NGU7 62 aa-0.32□□□□□ -2.46
GYPB-207ENST00000506679 CEBPZOSA8MTT3 80 aa-0.32□□□□□ -2.46
GYPB-207ENST00000506679 NDUFA3O95167 84 aa-0.32□□□□□ -2.46
GYPB-207ENST00000506679 TNP1P09430 55 aa-0.32□□□□□ -2.46
GYPB-207ENST00000506679 RPS29P62273 56 aaKnown RBP-0.32□□□□□ -2.46
GYPB-207ENST00000506679 PRLHP81277 87 aa-0.32□□□□□ -2.46
GYPB-207ENST00000506679 DEFB106AQ8N104 65 aa-0.32□□□□□ -2.46
GYPB-207ENST00000506679 MT1LQ93083 61 aa-0.32□□□□□ -2.46
GYPB-207ENST00000506679 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.32□□□□□ -2.46
GYPB-207ENST00000506679 PREX2Q70Z35 1606 aa-0.32□□□□□ -2.46
GYPB-207ENST00000506679 ANKRD36CQ5JPF3 1778 aa-0.32□□□□□ -2.46
GYPB-207ENST00000506679 URB2Q14146 1524 aaKnown RBP-0.33□□□□□ -2.46
GYPB-207ENST00000506679 MT1FP04733 61 aa-0.33□□□□□ -2.46
GYPB-207ENST00000506679 C3orf79P0CE67 100 aa-0.33□□□□□ -2.46
GYPB-207ENST00000506679 SPART-AS1P0CW21 52 aa-0.33□□□□□ -2.46
GYPB-207ENST00000506679 KRTAP19-5Q3LI72 72 aa-0.33□□□□□ -2.46
GYPB-207ENST00000506679 DNMBPQ6XZF7 1577 aa-0.33□□□□□ -2.46
GYPB-207ENST00000506679 DOT1LQ8TEK3 1739 aa-0.33□□□□□ -2.46
GYPB-207ENST00000506679 KANTRA0A1W2PQU2 76 aa-0.34□□□□□ -2.46
GYPB-207ENST00000506679 A8MTW9 85 aa-0.34□□□□□ -2.46
GYPB-207ENST00000506679 LY75O60449 1722 aa-0.34□□□□□ -2.46
GYPB-207ENST00000506679 LINC00158P58513 81 aa-0.34□□□□□ -2.46
GYPB-207ENST00000506679 MAGI3Q5TCQ9 1506 aa-0.34□□□□□ -2.46
GYPB-207ENST00000506679 ARFGEF2Q9Y6D5 1785 aa-0.34□□□□□ -2.46
GYPB-207ENST00000506679 CCDC88BA6NC98 1476 aa-0.35□□□□□ -2.46
GYPB-207ENST00000506679 UACAQ9BZF9 1416 aa-0.35□□□□□ -2.47
GYPB-207ENST00000506679 IGLV5-48A0A075B6I7 105 aa-0.35□□□□□ -2.47
GYPB-207ENST00000506679 IFI6P09912 130 aa-0.35□□□□□ -2.47
GYPB-207ENST00000506679 NOP10Q9NPE3 64 aaKnown RBP-0.35□□□□□ -2.47
GYPB-207ENST00000506679 CPS1P31327 1500 aa-0.35□□□□□ -2.47
GYPB-207ENST00000506679 DCAF1Q9Y4B6 1507 aa-0.35□□□□□ -2.47
GYPB-207ENST00000506679 SCN11AQ9UI33 1791 aa-0.35□□□□□ -2.47
GYPB-207ENST00000506679 PLXNC1O60486 1568 aa-0.36□□□□□ -2.47
GYPB-207ENST00000506679 LYNX1G3V0Z9 82 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms