RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 Q8N8P6 123 aa1.22□□□□□ -2.21
TRAPPC11-205ENST00000506426 SPRR4Q96PI1 79 aa1.22□□□□□ -2.21
TRAPPC11-205ENST00000506426 SNURFQ9Y675 71 aa1.22□□□□□ -2.21
TRAPPC11-205ENST00000506426 MACF1Q9UPN3 7388 aaKnown RBP1.21□□□□□ -2.22
TRAPPC11-205ENST00000506426 NDUFA6P56556 154 aa1.21□□□□□ -2.22
TRAPPC11-205ENST00000506426 ROMO1P60602 79 aa1.21□□□□□ -2.22
TRAPPC11-205ENST00000506426 MT1HP80294 61 aa1.21□□□□□ -2.22
TRAPPC11-205ENST00000506426 PMCHL1Q16048 86 aa1.21□□□□□ -2.22
TRAPPC11-205ENST00000506426 KRTAP19-2Q3LHN2 52 aa1.21□□□□□ -2.22
TRAPPC11-205ENST00000506426 ASB16-AS1Q495Z4 193 aa1.21□□□□□ -2.22
TRAPPC11-205ENST00000506426 PRR15Q8IV56 129 aa1.21□□□□□ -2.22
TRAPPC11-205ENST00000506426 ERG28Q9UKR5 140 aa1.21□□□□□ -2.22
TRAPPC11-205ENST00000506426 LAMTOR2Q9Y2Q5 125 aa1.21□□□□□ -2.22
TRAPPC11-205ENST00000506426 GPR98Q8WXG9 6306 aa1.21□□□□□ -2.22
TRAPPC11-205ENST00000506426 SSPOA2VEC9 5147 aa1.21□□□□□ -2.22
TRAPPC11-205ENST00000506426 C9orf92A6NGG3 77 aa1.2□□□□□ -2.22
TRAPPC11-205ENST00000506426 TSTD3H0UI37 97 aa1.2□□□□□ -2.22
TRAPPC11-205ENST00000506426 K7ERJ3 54 aa1.2□□□□□ -2.22
TRAPPC11-205ENST00000506426 ERC2-IT1O76042 136 aa1.2□□□□□ -2.22
TRAPPC11-205ENST00000506426 PEA15Q15121 130 aa1.2□□□□□ -2.22
TRAPPC11-205ENST00000506426 CHCHD1Q96BP2 118 aaKnown RBP1.2□□□□□ -2.22
TRAPPC11-205ENST00000506426 NXT2Q9NPJ8 142 aaKnown RBP1.2□□□□□ -2.22
TRAPPC11-205ENST00000506426 FLGP20930 4061 aaPredicted RBP1.19□□□□□ -2.22
TRAPPC11-205ENST00000506426 TRBV10-3A0A0K0K1G6 114 aa1.19□□□□□ -2.22
TRAPPC11-205ENST00000506426 H3BRM9 83 aa1.19□□□□□ -2.22
TRAPPC11-205ENST00000506426 MT-ND4LP03901 98 aa1.19□□□□□ -2.22
TRAPPC11-205ENST00000506426 SMIM13P0DJ93 91 aa1.19□□□□□ -2.22
TRAPPC11-205ENST00000506426 IGLC3P0DOY3 106 aa1.19□□□□□ -2.22
TRAPPC11-205ENST00000506426 LINC00158P58513 81 aa1.19□□□□□ -2.22
TRAPPC11-205ENST00000506426 NPC2P61916 151 aa1.19□□□□□ -2.22
TRAPPC11-205ENST00000506426 SEC11AP67812 179 aa1.19□□□□□ -2.22
TRAPPC11-205ENST00000506426 MEIG1Q5JSS6 88 aa1.19□□□□□ -2.22
TRAPPC11-205ENST00000506426 TMEM170BQ5T4T1 132 aa1.19□□□□□ -2.22
TRAPPC11-205ENST00000506426 C9orf153Q5TBE3 101 aa1.19□□□□□ -2.22
TRAPPC11-205ENST00000506426 HRCT1Q6UXD1 115 aa1.19□□□□□ -2.22
TRAPPC11-205ENST00000506426 SMCO4Q9NRQ5 59 aa1.19□□□□□ -2.22
TRAPPC11-205ENST00000506426 ETDCA0A1B0GVM5 59 aa1.18□□□□□ -2.22
TRAPPC11-205ENST00000506426 M0R2T5 61 aa1.18□□□□□ -2.22
TRAPPC11-205ENST00000506426 SPRR1AP35321 89 aa1.18□□□□□ -2.22
TRAPPC11-205ENST00000506426 BAGE3Q86Y29 109 aa1.18□□□□□ -2.22
TRAPPC11-205ENST00000506426 NDUFA12Q9UI09 145 aa1.18□□□□□ -2.22
TRAPPC11-205ENST00000506426 LINC01546A6NGU7 62 aa1.17□□□□□ -2.22
TRAPPC11-205ENST00000506426 K7EMI3 77 aa1.17□□□□□ -2.22
TRAPPC11-205ENST00000506426 SPINK1P00995 79 aa1.17□□□□□ -2.22
TRAPPC11-205ENST00000506426 HBDP02042 147 aa1.17□□□□□ -2.22
TRAPPC11-205ENST00000506426 FABP2P12104 132 aa1.17□□□□□ -2.22
TRAPPC11-205ENST00000506426 SPAG11AQ6PDA7 123 aa1.17□□□□□ -2.22
TRAPPC11-205ENST00000506426 COX6B2Q6YFQ2 88 aa1.17□□□□□ -2.22
TRAPPC11-205ENST00000506426 Q6ZRX8 168 aa1.17□□□□□ -2.22
TRAPPC11-205ENST00000506426 C18orf32Q8TCD1 76 aa1.17□□□□□ -2.22
TRAPPC11-205ENST00000506426 RAB37Q96AX2 223 aa1.17□□□□□ -2.22
TRAPPC11-205ENST00000506426 PMCHL2Q9BQD1 86 aa1.17□□□□□ -2.22
TRAPPC11-205ENST00000506426 KCNQ1DNQ9H478 68 aa1.17□□□□□ -2.22
TRAPPC11-205ENST00000506426 FCGBPQ9Y6R7 5405 aaPredicted RBP1.17□□□□□ -2.22
TRAPPC11-205ENST00000506426 TRAV23DV6A0A075B6W5 121 aa1.16□□□□□ -2.22
TRAPPC11-205ENST00000506426 A0A087WSZ3 146 aa1.16□□□□□ -2.22
TRAPPC11-205ENST00000506426 hDV103S1A0JD37 113 aa1.16□□□□□ -2.22
TRAPPC11-205ENST00000506426 TMEM218A2RU14 115 aa1.16□□□□□ -2.22
TRAPPC11-205ENST00000506426 S100PP25815 95 aa1.16□□□□□ -2.22
TRAPPC11-205ENST00000506426 COX17Q14061 63 aa1.16□□□□□ -2.22
TRAPPC11-205ENST00000506426 FAM19A2Q8N3H0 131 aa1.16□□□□□ -2.22
TRAPPC11-205ENST00000506426 CDC42SE1Q9NRR8 79 aa1.16□□□□□ -2.22
TRAPPC11-205ENST00000506426 ORMDL1Q9P0S3 153 aa1.16□□□□□ -2.22
TRAPPC11-205ENST00000506426 NEBP20929 6669 aa1.16□□□□□ -2.22
TRAPPC11-205ENST00000506426 LOC110117498A0A087WWA1 95 aa1.15□□□□□ -2.23
TRAPPC11-205ENST00000506426 RPS29P62273 56 aaKnown RBP1.15□□□□□ -2.23
TRAPPC11-205ENST00000506426 CLLU1Q5K131 121 aa1.15□□□□□ -2.23
TRAPPC11-205ENST00000506426 S100A7L2Q5SY68 101 aa1.15□□□□□ -2.23
TRAPPC11-205ENST00000506426 DEFB105AQ8NG35 78 aa1.15□□□□□ -2.23
TRAPPC11-205ENST00000506426 IFI27L1Q96BM0 104 aa1.15□□□□□ -2.23
TRAPPC11-205ENST00000506426 SEC11CQ9BY50 192 aa1.15□□□□□ -2.23
TRAPPC11-205ENST00000506426 MYMXA0A1B0GTQ4 84 aa1.14□□□□□ -2.23
TRAPPC11-205ENST00000506426 LINC01549A6NIU2 74 aa1.14□□□□□ -2.23
TRAPPC11-205ENST00000506426 APOC3P02656 99 aa1.14□□□□□ -2.23
TRAPPC11-205ENST00000506426 RPL37P61927 97 aaKnown RBP1.14□□□□□ -2.23
TRAPPC11-205ENST00000506426 S100A12P80511 92 aa1.14□□□□□ -2.23
TRAPPC11-205ENST00000506426 SFTA2Q6UW10 78 aa1.14□□□□□ -2.23
TRAPPC11-205ENST00000506426 SSBP3-AS1Q7Z2R9 100 aa1.14□□□□□ -2.23
TRAPPC11-205ENST00000506426 LIMD2Q9BT23 127 aa1.14□□□□□ -2.23
TRAPPC11-205ENST00000506426 INE1O15225 51 aa1.13□□□□□ -2.23
TRAPPC11-205ENST00000506426 FABP4P15090 132 aa1.13□□□□□ -2.23
TRAPPC11-205ENST00000506426 COX7BP24311 80 aa1.13□□□□□ -2.23
TRAPPC11-205ENST00000506426 TEN1Q86WV5 123 aa1.13□□□□□ -2.23
TRAPPC11-205ENST00000506426 OBSCN-AS1Q96MR7 158 aa1.13□□□□□ -2.23
TRAPPC11-205ENST00000506426 TRBV7-6A0A0J9YX20 115 aa1.12□□□□□ -2.23
TRAPPC11-205ENST00000506426 F8W1H4 67 aa1.12□□□□□ -2.23
TRAPPC11-205ENST00000506426 J3KT08 172 aa1.12□□□□□ -2.23
TRAPPC11-205ENST00000506426 DPM2O94777 84 aa1.12□□□□□ -2.23
TRAPPC11-205ENST00000506426 LEPROTL1O95214 131 aa1.12□□□□□ -2.23
TRAPPC11-205ENST00000506426 IGKCP01834 107 aa1.12□□□□□ -2.23
TRAPPC11-205ENST00000506426 MT2AP02795 61 aa1.12□□□□□ -2.23
TRAPPC11-205ENST00000506426 MT1FP04733 61 aa1.12□□□□□ -2.23
TRAPPC11-205ENST00000506426 SPRR1BP22528 89 aa1.12□□□□□ -2.23
TRAPPC11-205ENST00000506426 PLNP26678 52 aa1.12□□□□□ -2.23
TRAPPC11-205ENST00000506426 ELOF1P60002 83 aaKnown RBP1.12□□□□□ -2.23
TRAPPC11-205ENST00000506426 LINC00308Q8TCZ7 52 aa1.12□□□□□ -2.23
TRAPPC11-205ENST00000506426 PRO1933Q9H354 126 aa1.12□□□□□ -2.23
TRAPPC11-205ENST00000506426 SPANXCQ9NY87 97 aa1.12□□□□□ -2.23
TRAPPC11-205ENST00000506426 LOC107984156A0A0G2JMH3 177 aa1.11□□□□□ -2.23
TRAPPC11-205ENST00000506426 ZNF815PA8K554 130 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms