RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 POLR2KP53803 58 aaKnown RBP5.11□□□□□ -1.59
HTT-203ENST00000506137 PKHD1P08F94 4074 aa5.1□□□□□ -1.59
HTT-203ENST00000506137 RNF213Q63HN8 5207 aa5.1□□□□□ -1.59
HTT-203ENST00000506137 C10orf55Q5SWW7 151 aa5.1□□□□□ -1.59
HTT-203ENST00000506137 FLG2Q5D862 2391 aaPredicted RBP5.09□□□□□ -1.59
HTT-203ENST00000506137 Q8IZM0 81 aa5.09□□□□□ -1.59
HTT-203ENST00000506137 DNAH10Q8IVF4 4471 aa5.09□□□□□ -1.6
HTT-203ENST00000506137 PLECQ15149 4684 aaKnown RBP5.08□□□□□ -1.6
HTT-203ENST00000506137 ALMS1Q8TCU4 4167 aa5.08□□□□□ -1.6
HTT-203ENST00000506137 IGLV6-57P01721 117 aa5.08□□□□□ -1.6
HTT-203ENST00000506137 LINC00612Q8N6U2 182 aa5.08□□□□□ -1.6
HTT-203ENST00000506137 K7EIL1 84 aa5.07□□□□□ -1.6
HTT-203ENST00000506137 LY6G6CO95867 125 aa5.07□□□□□ -1.6
HTT-203ENST00000506137 HUWE1Q7Z6Z7 4374 aaKnown RBP5.07□□□□□ -1.6
HTT-203ENST00000506137 KRTAP4-8A0A0G2JLE6 195 aa5.05□□□□□ -1.6
HTT-203ENST00000506137 PRCDQ00LT1 54 aa5.05□□□□□ -1.6
HTT-203ENST00000506137 HSPG2P98160 4391 aa5.05□□□□□ -1.6
HTT-203ENST00000506137 IGKV2D-24A0A075B6R9 120 aa5.04□□□□□ -1.6
HTT-203ENST00000506137 GAS8-AS1O95177 125 aa5.04□□□□□ -1.6
HTT-203ENST00000506137 ANGP03950 147 aaKnown RBP5.04□□□□□ -1.6
HTT-203ENST00000506137 INE1O15225 51 aa5.03□□□□□ -1.6
HTT-203ENST00000506137 LINC00315P59091 139 aa5.03□□□□□ -1.6
HTT-203ENST00000506137 LINC00575Q6W349 94 aa5.03□□□□□ -1.6
HTT-203ENST00000506137 KRTAP11-1Q8IUC1 163 aa5.03□□□□□ -1.6
HTT-203ENST00000506137 Q8N9L7 120 aa5.03□□□□□ -1.6
HTT-203ENST00000506137 FAT4Q6V0I7 4981 aa5.03□□□□□ -1.6
HTT-203ENST00000506137 IGKV2-28A0A075B6P5 120 aa5.02□□□□□ -1.61
HTT-203ENST00000506137 IGKV2D-28P01615 120 aa5.02□□□□□ -1.61
HTT-203ENST00000506137 LINC00304Q8N9R0 145 aa5.02□□□□□ -1.61
HTT-203ENST00000506137 HMCN2Q8NDA2 5059 aa5.02□□□□□ -1.61
HTT-203ENST00000506137 HRES1P13985 223 aa5.01□□□□□ -1.61
HTT-203ENST00000506137 M0R2N4 97 aa5□□□□□ -1.61
HTT-203ENST00000506137 RPS27P42677 84 aaKnown RBP5□□□□□ -1.61
HTT-203ENST00000506137 PIGYQ3MUY2 71 aa5□□□□□ -1.61
HTT-203ENST00000506137 LCE4AQ5TA78 99 aa5□□□□□ -1.61
HTT-203ENST00000506137 TP53AIP1Q9HCN2 124 aa5□□□□□ -1.61
HTT-203ENST00000506137 CDKN2A-AS1Q9UH64 79 aa5□□□□□ -1.61
HTT-203ENST00000506137 TPRXLQ17RH7 258 aa4.98□□□□□ -1.61
HTT-203ENST00000506137 LCE1DQ5T752 114 aa4.98□□□□□ -1.61
HTT-203ENST00000506137 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.97□□□□□ -1.61
HTT-203ENST00000506137 SSBP3-AS1Q7Z2R9 100 aa4.97□□□□□ -1.61
HTT-203ENST00000506137 LYNX1G3V0Z9 82 aa4.96□□□□□ -1.62
HTT-203ENST00000506137 H3BRN7 92 aa4.96□□□□□ -1.62
HTT-203ENST00000506137 SPACA4Q8TDM5 124 aa4.96□□□□□ -1.62
HTT-203ENST00000506137 DYNC1H1Q14204 4646 aaKnown RBP4.94□□□□□ -1.62
HTT-203ENST00000506137 FAT2Q9NYQ8 4349 aa4.94□□□□□ -1.62
HTT-203ENST00000506137 KRTAP10-3P60369 221 aa4.93□□□□□ -1.62
HTT-203ENST00000506137 RPL39P62891 51 aaKnown RBP4.93□□□□□ -1.62
HTT-203ENST00000506137 SPINK9Q5DT21 86 aa4.93□□□□□ -1.62
HTT-203ENST00000506137 CRCT1Q9UGL9 99 aa4.93□□□□□ -1.62
HTT-203ENST00000506137 MYCBP2O75592 4640 aa4.92□□□□□ -1.62
HTT-203ENST00000506137 KRTAP9-7A8MTY7 169 aa4.92□□□□□ -1.62
HTT-203ENST00000506137 DNAH11Q96DT5 4516 aa4.91□□□□□ -1.62
HTT-203ENST00000506137 RPL39LQ96EH5 51 aaKnown RBP4.91□□□□□ -1.62
HTT-203ENST00000506137 IGKV2-30P06310 120 aa4.89□□□□□ -1.63
HTT-203ENST00000506137 C10orf99Q6UWK7 81 aa4.89□□□□□ -1.63
HTT-203ENST00000506137 Q6ZRX8 168 aa4.89□□□□□ -1.63
HTT-203ENST00000506137 PLAC4Q8WY50 150 aa4.89□□□□□ -1.63
HTT-203ENST00000506137 KRTAP29-1A8MX34 341 aaPredicted RBP4.87□□□□□ -1.63
HTT-203ENST00000506137 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
HTT-203ENST00000506137 G3V318 75 aa4.85□□□□□ -1.63
HTT-203ENST00000506137 DSCR10P59022 87 aa4.85□□□□□ -1.63
HTT-203ENST00000506137 COX6B2Q6YFQ2 88 aa4.85□□□□□ -1.63
HTT-203ENST00000506137 IGLV5-48A0A075B6I7 105 aa4.83□□□□□ -1.64
HTT-203ENST00000506137 PRB3Q04118 309 aaPredicted RBP4.82□□□□□ -1.64
HTT-203ENST00000506137 KRTAP10-11P60412 298 aa4.81□□□□□ -1.64
HTT-203ENST00000506137 APOBP04114 4563 aaKnown RBP4.8□□□□□ -1.64
HTT-203ENST00000506137 FSIP2Q5CZC0 6907 aa4.8□□□□□ -1.64
HTT-203ENST00000506137 GVQW2A0A096LPI5 108 aaPredicted RBP4.8□□□□□ -1.64
HTT-203ENST00000506137 A0A1B0GVY2 172 aa4.8□□□□□ -1.64
HTT-203ENST00000506137 MINOS1Q5TGZ0 78 aa4.8□□□□□ -1.64
HTT-203ENST00000506137 K7EQZ3 153 aa4.79□□□□□ -1.64
HTT-203ENST00000506137 KRTAP4-9Q9BYQ8 210 aa4.79□□□□□ -1.64
HTT-203ENST00000506137 CRIPTQ9P021 101 aa4.79□□□□□ -1.64
HTT-203ENST00000506137 C6orf48Q9UBA6 75 aa4.79□□□□□ -1.64
HTT-203ENST00000506137 DNAH2Q9P225 4427 aa4.77□□□□□ -1.65
HTT-203ENST00000506137 M0QY20 66 aa4.77□□□□□ -1.65
HTT-203ENST00000506137 C14orf177Q52M58 125 aa4.77□□□□□ -1.65
HTT-203ENST00000506137 TMEM167AQ8TBQ9 72 aa4.77□□□□□ -1.65
HTT-203ENST00000506137 SORL1Q92673 2214 aa4.77□□□□□ -1.65
HTT-203ENST00000506137 VPS13DQ5THJ4 4388 aa4.76□□□□□ -1.65
HTT-203ENST00000506137 IGKV2-24A0A0C4DH68 120 aa4.76□□□□□ -1.65
HTT-203ENST00000506137 I3L2K1 104 aa4.76□□□□□ -1.65
HTT-203ENST00000506137 PKD1P98161 4303 aa4.76□□□□□ -1.65
HTT-203ENST00000506137 DNAH6Q9C0G6 4158 aa4.75□□□□□ -1.65
HTT-203ENST00000506137 KRTAP10-2P60368 255 aa4.75□□□□□ -1.65
HTT-203ENST00000506137 IGKV2D-30A0A075B6S6 120 aa4.74□□□□□ -1.65
HTT-203ENST00000506137 KRTAP9-3Q9BYQ3 159 aa4.74□□□□□ -1.65
HTT-203ENST00000506137 LCE5AQ5TCM9 118 aa4.73□□□□□ -1.65
HTT-203ENST00000506137 SPINK13Q1W4C9 94 aa4.72□□□□□ -1.65
HTT-203ENST00000506137 LRP2P98164 4655 aa4.71□□□□□ -1.66
HTT-203ENST00000506137 Q6ZRN7 208 aaPredicted RBP4.71□□□□□ -1.66
HTT-203ENST00000506137 DNAH17Q9UFH2 4485 aa4.7□□□□□ -1.66
HTT-203ENST00000506137 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
HTT-203ENST00000506137 LEAP2Q969E1 77 aa4.7□□□□□ -1.66
HTT-203ENST00000506137 USMG5Q96IX5 58 aa4.7□□□□□ -1.66
HTT-203ENST00000506137 LYNX1P0DP58 116 aa4.69□□□□□ -1.66
HTT-203ENST00000506137 DEFB131AP59861 70 aa4.69□□□□□ -1.66
HTT-203ENST00000506137 MRPL34Q9BQ48 92 aaKnown RBP4.68□□□□□ -1.66
HTT-203ENST00000506137 FAT1Q14517 4588 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms