RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 ABCA8O94911 1581 aa0.14□□□□□ -2.39
TOPBP1-204ENST00000505804 UBR3Q6ZT12 1888 aa0.14□□□□□ -2.39
TOPBP1-204ENST00000505804 NEXMIFQ5QGS0 1516 aa0.13□□□□□ -2.39
TOPBP1-204ENST00000505804 PVALEFA0A1B0GWK0 134 aa0.13□□□□□ -2.39
TOPBP1-204ENST00000505804 K7EP34 96 aa0.13□□□□□ -2.39
TOPBP1-204ENST00000505804 HMGN2P05204 90 aaKnown RBP0.13□□□□□ -2.39
TOPBP1-204ENST00000505804 COX8AP10176 69 aa0.13□□□□□ -2.39
TOPBP1-204ENST00000505804 SPRR1BP22528 89 aa0.13□□□□□ -2.39
TOPBP1-204ENST00000505804 SMIM11AP58511 58 aa0.13□□□□□ -2.39
TOPBP1-204ENST00000505804 GNG2P59768 71 aa0.13□□□□□ -2.39
TOPBP1-204ENST00000505804 PEA15Q15121 130 aa0.13□□□□□ -2.39
TOPBP1-204ENST00000505804 PYY3Q5JQD4 70 aa0.13□□□□□ -2.39
TOPBP1-204ENST00000505804 C9orf62Q8N4C0 152 aa0.13□□□□□ -2.39
TOPBP1-204ENST00000505804 DEFB124Q8NES8 71 aa0.13□□□□□ -2.39
TOPBP1-204ENST00000505804 CCDC88BA6NC98 1476 aa0.13□□□□□ -2.39
TOPBP1-204ENST00000505804 MROH2BQ7Z745 1585 aa0.13□□□□□ -2.39
TOPBP1-204ENST00000505804 C3P01024 1663 aa0.13□□□□□ -2.39
TOPBP1-204ENST00000505804 CLIP1P30622 1438 aa0.13□□□□□ -2.39
TOPBP1-204ENST00000505804 PLIN4Q96Q06 1357 aa0.12□□□□□ -2.39
TOPBP1-204ENST00000505804 IGLC2P0DOY2 106 aa0.12□□□□□ -2.39
TOPBP1-204ENST00000505804 IGLC3P0DOY3 106 aa0.12□□□□□ -2.39
TOPBP1-204ENST00000505804 SPRR2FQ96RM1 72 aa0.12□□□□□ -2.39
TOPBP1-204ENST00000505804 SCN11AQ9UI33 1791 aa0.11□□□□□ -2.39
TOPBP1-204ENST00000505804 PLCH1Q4KWH8 1693 aa0.11□□□□□ -2.39
TOPBP1-204ENST00000505804 FANCD2Q9BXW9 1451 aa0.11□□□□□ -2.39
TOPBP1-204ENST00000505804 KRTAP20-2Q3LI61 65 aa0.11□□□□□ -2.39
TOPBP1-204ENST00000505804 NMSQ5H8A3 153 aa0.11□□□□□ -2.39
TOPBP1-204ENST00000505804 S100A16Q96FQ6 103 aaKnown RBP0.11□□□□□ -2.39
TOPBP1-204ENST00000505804 SCRIBQ14160 1630 aa0.11□□□□□ -2.39
TOPBP1-204ENST00000505804 ABCA6Q8N139 1617 aa0.11□□□□□ -2.39
TOPBP1-204ENST00000505804 MROH1Q8NDA8 1641 aa0.11□□□□□ -2.39
TOPBP1-204ENST00000505804 ABCC1P33527 1531 aa0.11□□□□□ -2.39
TOPBP1-204ENST00000505804 UACAQ9BZF9 1416 aa0.11□□□□□ -2.39
TOPBP1-204ENST00000505804 DOT1LQ8TEK3 1739 aa0.1□□□□□ -2.39
TOPBP1-204ENST00000505804 PIK3C2BO00750 1634 aa0.1□□□□□ -2.39
TOPBP1-204ENST00000505804 IQCF6A8MYZ5 107 aa0.1□□□□□ -2.39
TOPBP1-204ENST00000505804 CYB5AP00167 134 aa0.1□□□□□ -2.39
TOPBP1-204ENST00000505804 DEFB105AQ8NG35 78 aa0.1□□□□□ -2.39
TOPBP1-204ENST00000505804 FXYD6Q9H0Q3 95 aa0.1□□□□□ -2.39
TOPBP1-204ENST00000505804 CRIPTQ9P021 101 aa0.1□□□□□ -2.39
TOPBP1-204ENST00000505804 RGPD8O14715 1765 aaPredicted RBP0.09□□□□□ -2.39
TOPBP1-204ENST00000505804 RGPD5Q99666 1765 aa0.09□□□□□ -2.39
TOPBP1-204ENST00000505804 ATP7AQ04656 1500 aa0.09□□□□□ -2.39
TOPBP1-204ENST00000505804 KIF1AQ12756 1690 aa0.09□□□□□ -2.39
TOPBP1-204ENST00000505804 NHSQ6T4R5 1651 aa0.09□□□□□ -2.39
TOPBP1-204ENST00000505804 SPTY2D1-AS1A0A0U1RR47 76 aa0.09□□□□□ -2.4
TOPBP1-204ENST00000505804 CPSF4LA6NMK7 179 aaKnown RBP0.09□□□□□ -2.4
TOPBP1-204ENST00000505804 I3L3M4 83 aa0.09□□□□□ -2.4
TOPBP1-204ENST00000505804 SNRPFP62306 86 aaKnown RBP0.09□□□□□ -2.4
TOPBP1-204ENST00000505804 PLGLAQ15195 96 aa0.09□□□□□ -2.4
TOPBP1-204ENST00000505804 KLK9Q2XQG4 91 aa0.09□□□□□ -2.4
TOPBP1-204ENST00000505804 DEFB112Q30KQ8 113 aa0.09□□□□□ -2.4
TOPBP1-204ENST00000505804 SAMD9LQ8IVG5 1584 aa0.09□□□□□ -2.4
TOPBP1-204ENST00000505804 C4AP0C0L4 1744 aa0.09□□□□□ -2.4
TOPBP1-204ENST00000505804 C4BP0C0L5 1744 aa0.09□□□□□ -2.4
TOPBP1-204ENST00000505804 CCDC18Q5T9S5 1454 aa0.09□□□□□ -2.4
TOPBP1-204ENST00000505804 ARFGEF2Q9Y6D5 1785 aa0.09□□□□□ -2.4
TOPBP1-204ENST00000505804 EFCAB5A4FU69 1503 aa0.08□□□□□ -2.4
TOPBP1-204ENST00000505804 TIAM1Q13009 1591 aa0.08□□□□□ -2.4
TOPBP1-204ENST00000505804 MYMXA0A1B0GTQ4 84 aa0.08□□□□□ -2.4
TOPBP1-204ENST00000505804 A0A1B0GUT8 65 aa0.08□□□□□ -2.4
TOPBP1-204ENST00000505804 SPINK4O60575 86 aa0.08□□□□□ -2.4
TOPBP1-204ENST00000505804 MRPL34Q9BQ48 92 aaKnown RBP0.08□□□□□ -2.4
TOPBP1-204ENST00000505804 RABAC1Q9UI14 185 aa0.08□□□□□ -2.4
TOPBP1-204ENST00000505804 DEPDC5O75140 1603 aa0.08□□□□□ -2.4
TOPBP1-204ENST00000505804 EIF2AK4Q9P2K8 1649 aaKnown RBP0.08□□□□□ -2.4
TOPBP1-204ENST00000505804 ITSN2Q9NZM3 1697 aa0.08□□□□□ -2.4
TOPBP1-204ENST00000505804 ERICH3Q5RHP9 1530 aa0.08□□□□□ -2.4
TOPBP1-204ENST00000505804 PRM1P04553 51 aa0.07□□□□□ -2.4
TOPBP1-204ENST00000505804 MT1HP80294 61 aa0.07□□□□□ -2.4
TOPBP1-204ENST00000505804 TDRG1Q3Y452 100 aa0.07□□□□□ -2.4
TOPBP1-204ENST00000505804 LINC00643Q86TS7 51 aa0.07□□□□□ -2.4
TOPBP1-204ENST00000505804 APLNQ9ULZ1 77 aa0.07□□□□□ -2.4
TOPBP1-204ENST00000505804 IQGAP1P46940 1657 aa0.07□□□□□ -2.4
TOPBP1-204ENST00000505804 LMTK2Q8IWU2 1503 aa0.07□□□□□ -2.4
TOPBP1-204ENST00000505804 CFAP74Q9C0B2 1584 aa0.06□□□□□ -2.4
TOPBP1-204ENST00000505804 ACYP1P07311 99 aa0.06□□□□□ -2.4
TOPBP1-204ENST00000505804 COX7BP24311 80 aa0.06□□□□□ -2.4
TOPBP1-204ENST00000505804 H1FX-AS1Q4G0G2 97 aa0.06□□□□□ -2.4
TOPBP1-204ENST00000505804 DEFB121Q5J5C9 76 aa0.06□□□□□ -2.4
TOPBP1-204ENST00000505804 NCOA2Q15596 1464 aa0.05□□□□□ -2.4
TOPBP1-204ENST00000505804 DDX60LQ5H9U9 1706 aaKnown RBP0.05□□□□□ -2.4
TOPBP1-204ENST00000505804 LRRIQ1Q96JM4 1722 aa0.05□□□□□ -2.4
TOPBP1-204ENST00000505804 CEBPZOSA8MTT3 80 aa0.05□□□□□ -2.4
TOPBP1-204ENST00000505804 CCL22O00626 93 aa0.05□□□□□ -2.4
TOPBP1-204ENST00000505804 MT1HL1P0DM35 61 aa0.05□□□□□ -2.4
TOPBP1-204ENST00000505804 LMO7Q8WWI1 1683 aa0.05□□□□□ -2.4
TOPBP1-204ENST00000505804 ANKRD50Q9ULJ7 1429 aa0.04□□□□□ -2.4
TOPBP1-204ENST00000505804 LY75O60449 1722 aa0.04□□□□□ -2.4
TOPBP1-204ENST00000505804 NRAPQ86VF7 1730 aa0.04□□□□□ -2.4
TOPBP1-204ENST00000505804 AGLP35573 1532 aa0.04□□□□□ -2.4
TOPBP1-204ENST00000505804 KANTRA0A1W2PQU2 76 aa0.04□□□□□ -2.4
TOPBP1-204ENST00000505804 RPL38P63173 70 aaKnown RBP0.04□□□□□ -2.4
TOPBP1-204ENST00000505804 GAFA1Q96PS6 74 aa0.04□□□□□ -2.4
TOPBP1-204ENST00000505804 PTPN23Q9H3S7 1636 aa0.04□□□□□ -2.4
TOPBP1-204ENST00000505804 RRBP1Q9P2E9 1410 aaKnown RBP0.04□□□□□ -2.4
TOPBP1-204ENST00000505804 NFAT5O94916 1531 aa0.03□□□□□ -2.4
TOPBP1-204ENST00000505804 INO80Q9ULG1 1556 aaPredicted RBP0.03□□□□□ -2.4
TOPBP1-204ENST00000505804 CLTCL1P53675 1640 aa0.03□□□□□ -2.4
TOPBP1-204ENST00000505804 TRAV21A0A0B4J279 112 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms