RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 A0A0U1RQV1 116 aa6.32□□□□□ -1.4
KDM3B-203ENST00000505756 ATP5EP2Q5VTU8 51 aa6.32□□□□□ -1.4
KDM3B-203ENST00000505756 LINC00643Q86TS7 51 aa6.32□□□□□ -1.4
KDM3B-203ENST00000505756 Q96NJ1 140 aa6.32□□□□□ -1.4
KDM3B-203ENST00000505756 LINC00472Q9H8W2 130 aa6.32□□□□□ -1.4
KDM3B-203ENST00000505756 LCE2CQ5TA81 110 aa6.31□□□□□ -1.4
KDM3B-203ENST00000505756 NREPQ16612 68 aa6.3□□□□□ -1.4
KDM3B-203ENST00000505756 CXCL6P80162 114 aa6.29□□□□□ -1.4
KDM3B-203ENST00000505756 XP32Q5T750 250 aa6.29□□□□□ -1.4
KDM3B-203ENST00000505756 J3KT08 172 aa6.28□□□□□ -1.4
KDM3B-203ENST00000505756 SEC61BP60468 96 aaKnown RBP6.28□□□□□ -1.4
KDM3B-203ENST00000505756 C1orf195Q5TG92 126 aa6.28□□□□□ -1.4
KDM3B-203ENST00000505756 H3BS24 57 aa6.27□□□□□ -1.41
KDM3B-203ENST00000505756 LCE2AQ5TA79 106 aaPredicted RBP6.26□□□□□ -1.41
KDM3B-203ENST00000505756 SIGMAR1Q99720 223 aa6.25□□□□□ -1.41
KDM3B-203ENST00000505756 FAT4Q6V0I7 4981 aa6.25□□□□□ -1.41
KDM3B-203ENST00000505756 C9orf92A6NGG3 77 aa6.24□□□□□ -1.41
KDM3B-203ENST00000505756 BPY2O14599 106 aa6.24□□□□□ -1.41
KDM3B-203ENST00000505756 DSCR10P59022 87 aa6.24□□□□□ -1.41
KDM3B-203ENST00000505756 IMUPQ9GZP8 106 aa6.23□□□□□ -1.41
KDM3B-203ENST00000505756 A8MWP4 228 aa6.22□□□□□ -1.41
KDM3B-203ENST00000505756 MT-ATP8P03928 68 aa6.2□□□□□ -1.42
KDM3B-203ENST00000505756 IGKV4-1P06312 121 aa6.2□□□□□ -1.42
KDM3B-203ENST00000505756 PRR15Q8IV56 129 aa6.19□□□□□ -1.42
KDM3B-203ENST00000505756 IGKV3D-7A0A0C4DH55 119 aa6.18□□□□□ -1.42
KDM3B-203ENST00000505756 KRTAP4-1Q9BYQ7 146 aa6.18□□□□□ -1.42
KDM3B-203ENST00000505756 A0A1B0GVX0 72 aa6.17□□□□□ -1.42
KDM3B-203ENST00000505756 K7EQZ3 153 aa6.17□□□□□ -1.42
KDM3B-203ENST00000505756 DEFB116Q30KQ4 102 aa6.17□□□□□ -1.42
KDM3B-203ENST00000505756 NDUFB1O75438 58 aa6.16□□□□□ -1.42
KDM3B-203ENST00000505756 PCOTHQ58A44 107 aa6.15□□□□□ -1.42
KDM3B-203ENST00000505756 C8orf87E5RJ46 101 aa6.14□□□□□ -1.43
KDM3B-203ENST00000505756 RPL37P61927 97 aaKnown RBP6.14□□□□□ -1.43
KDM3B-203ENST00000505756 LORP23490 312 aaPredicted RBP6.13□□□□□ -1.43
KDM3B-203ENST00000505756 Q8N9L7 120 aa6.13□□□□□ -1.43
KDM3B-203ENST00000505756 MMP24-AS1A0A0U1RRL7 71 aa6.12□□□□□ -1.43
KDM3B-203ENST00000505756 HIST1H4AP62805 103 aaKnown RBP6.12□□□□□ -1.43
KDM3B-203ENST00000505756 C8orf17Q9NRJ1 99 aa6.11□□□□□ -1.43
KDM3B-203ENST00000505756 HCG22E2RYF7 251 aa6.1□□□□□ -1.43
KDM3B-203ENST00000505756 A0A087WVE0 104 aa6.09□□□□□ -1.43
KDM3B-203ENST00000505756 IGHV6-1A0A0B4J1U7 121 aa6.09□□□□□ -1.43
KDM3B-203ENST00000505756 KRTAP16-1A8MUX0 517 aa6.08□□□□□ -1.44
KDM3B-203ENST00000505756 TMEM254Q8TBM7 123 aa6.08□□□□□ -1.44
KDM3B-203ENST00000505756 LINC00313P59037 77 aa6.07□□□□□ -1.44
KDM3B-203ENST00000505756 Q75L30 129 aa6.07□□□□□ -1.44
KDM3B-203ENST00000505756 NOTCH2NLQ7Z3S9 236 aa6.07□□□□□ -1.44
KDM3B-203ENST00000505756 hDV103S1A0JD37 113 aa6.06□□□□□ -1.44
KDM3B-203ENST00000505756 SCGB1A1P11684 91 aa6.06□□□□□ -1.44
KDM3B-203ENST00000505756 CASC2Q6XLA1 102 aa6.05□□□□□ -1.44
KDM3B-203ENST00000505756 FAM236AA0A1B0GUQ0 79 aa6.04□□□□□ -1.44
KDM3B-203ENST00000505756 FAM236BA0A1B0GV22 79 aa6.04□□□□□ -1.44
KDM3B-203ENST00000505756 ATP11AUNQ6ZP68 121 aa6.04□□□□□ -1.44
KDM3B-203ENST00000505756 Q8N9P0 234 aaPredicted RBP6.04□□□□□ -1.44
KDM3B-203ENST00000505756 C20orf166-AS1Q96NR2 134 aa6.03□□□□□ -1.44
KDM3B-203ENST00000505756 MRPL34Q9BQ48 92 aaKnown RBP6.03□□□□□ -1.44
KDM3B-203ENST00000505756 KRTAP19-2Q3LHN2 52 aa6.02□□□□□ -1.45
KDM3B-203ENST00000505756 WFDC13Q8IUB5 93 aa6.02□□□□□ -1.45
KDM3B-203ENST00000505756 A8MUU9 505 aa6.01□□□□□ -1.45
KDM3B-203ENST00000505756 ATOX1O00244 68 aa6□□□□□ -1.45
KDM3B-203ENST00000505756 SMIM20Q8N5G0 67 aa5.99□□□□□ -1.45
KDM3B-203ENST00000505756 OCR1Q9BZK8 76 aa5.99□□□□□ -1.45
KDM3B-203ENST00000505756 TP53AIP1Q9HCN2 124 aa5.98□□□□□ -1.45
KDM3B-203ENST00000505756 MT1HP80294 61 aa5.95□□□□□ -1.46
KDM3B-203ENST00000505756 TRAV7A0A075B6U4 112 aa5.93□□□□□ -1.46
KDM3B-203ENST00000505756 UQCRQO14949 82 aa5.93□□□□□ -1.46
KDM3B-203ENST00000505756 COX6B2Q6YFQ2 88 aa5.93□□□□□ -1.46
KDM3B-203ENST00000505756 KRTAP9-2Q9BYQ4 174 aa5.92□□□□□ -1.46
KDM3B-203ENST00000505756 SERP2Q8N6R1 65 aa5.91□□□□□ -1.46
KDM3B-203ENST00000505756 TRAV22A0A0B4J277 110 aa5.89□□□□□ -1.47
KDM3B-203ENST00000505756 NDUFS5O43920 106 aa5.89□□□□□ -1.47
KDM3B-203ENST00000505756 ZCCHC13Q8WW36 166 aaKnown RBP5.89□□□□□ -1.47
KDM3B-203ENST00000505756 C5orf47Q569G3 176 aa5.88□□□□□ -1.47
KDM3B-203ENST00000505756 FLGP20930 4061 aaPredicted RBP5.87□□□□□ -1.47
KDM3B-203ENST00000505756 H3BPC8 53 aa5.87□□□□□ -1.47
KDM3B-203ENST00000505756 Q5W150 140 aa5.87□□□□□ -1.47
KDM3B-203ENST00000505756 COX7CP15954 63 aa5.86□□□□□ -1.47
KDM3B-203ENST00000505756 ANAPC13Q9BS18 74 aa5.86□□□□□ -1.47
KDM3B-203ENST00000505756 M0R2T5 61 aa5.85□□□□□ -1.47
KDM3B-203ENST00000505756 H0Y9P7 68 aa5.83□□□□□ -1.48
KDM3B-203ENST00000505756 MP68P56378 58 aa5.82□□□□□ -1.48
KDM3B-203ENST00000505756 KRTAP10-6P60371 365 aaPredicted RBP5.82□□□□□ -1.48
KDM3B-203ENST00000505756 LOC101927531A0A1B0GV80 90 aa5.81□□□□□ -1.48
KDM3B-203ENST00000505756 KLKP1Q107X0 134 aa5.81□□□□□ -1.48
KDM3B-203ENST00000505756 IGKV2-30P06310 120 aa5.79□□□□□ -1.48
KDM3B-203ENST00000505756 HRES1P13985 223 aa5.77□□□□□ -1.49
KDM3B-203ENST00000505756 C7orf65Q6ZTY9 151 aa5.77□□□□□ -1.49
KDM3B-203ENST00000505756 MPLKIPQ8TAP9 179 aa5.77□□□□□ -1.49
KDM3B-203ENST00000505756 RBM12B-AS1Q9P1G2 102 aa5.77□□□□□ -1.49
KDM3B-203ENST00000505756 C20orf197Q8N268 126 aa5.76□□□□□ -1.49
KDM3B-203ENST00000505756 C1orf64Q8NEQ6 169 aa5.76□□□□□ -1.49
KDM3B-203ENST00000505756 LINC00208Q96KT6 92 aa5.76□□□□□ -1.49
KDM3B-203ENST00000505756 FAM236DA0A1B0GTK5 79 aa5.75□□□□□ -1.49
KDM3B-203ENST00000505756 FAM236CP0DP71 79 aa5.75□□□□□ -1.49
KDM3B-203ENST00000505756 CYP4F30PQ9H0H9 118 aa5.75□□□□□ -1.49
KDM3B-203ENST00000505756 SPINK7P58062 85 aa5.74□□□□□ -1.49
KDM3B-203ENST00000505756 CCDC179H3BU77 68 aa5.73□□□□□ -1.49
KDM3B-203ENST00000505756 FSIP2Q5CZC0 6907 aa5.73□□□□□ -1.49
KDM3B-203ENST00000505756 NDUFC1O43677 76 aa5.72□□□□□ -1.49
KDM3B-203ENST00000505756 PCP4P48539 62 aa5.72□□□□□ -1.49
KDM3B-203ENST00000505756 IGKV2D-30A0A075B6S6 120 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms