RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 FSIP2Q5CZC0 6907 aa9.05□□□□□ -0.96
SYNE4-207ENST00000505054 RPL37P61927 97 aaKnown RBP9.04□□□□□ -0.96
SYNE4-207ENST00000505054 A0A1B0GW54 56 aa9.03□□□□□ -0.96
SYNE4-207ENST00000505054 PCOTHQ58A44 107 aa9.03□□□□□ -0.96
SYNE4-207ENST00000505054 DSCR10P59022 87 aa9.01□□□□□ -0.97
SYNE4-207ENST00000505054 LCE2CQ5TA81 110 aa8.99□□□□□ -0.97
SYNE4-207ENST00000505054 GTF2H5Q6ZYL4 71 aa8.99□□□□□ -0.97
SYNE4-207ENST00000505054 Q75L30 129 aa8.97□□□□□ -0.97
SYNE4-207ENST00000505054 NOTCH2NLQ7Z3S9 236 aa8.96□□□□□ -0.98
SYNE4-207ENST00000505054 J3KT08 172 aa8.95□□□□□ -0.98
SYNE4-207ENST00000505054 C20orf166-AS1Q96NR2 134 aa8.95□□□□□ -0.98
SYNE4-207ENST00000505054 IGHV6-1A0A0B4J1U7 121 aa8.94□□□□□ -0.98
SYNE4-207ENST00000505054 A0A1B0GVX0 72 aa8.94□□□□□ -0.98
SYNE4-207ENST00000505054 KRTAP16-1A8MUX0 517 aa8.94□□□□□ -0.98
SYNE4-207ENST00000505054 LINC00313P59037 77 aa8.94□□□□□ -0.98
SYNE4-207ENST00000505054 A8MUU9 505 aa8.93□□□□□ -0.98
SYNE4-207ENST00000505054 KRTAP19-2Q3LHN2 52 aa8.93□□□□□ -0.98
SYNE4-207ENST00000505054 MT1HP80294 61 aa8.92□□□□□ -0.98
SYNE4-207ENST00000505054 NREPQ16612 68 aa8.91□□□□□ -0.98
SYNE4-207ENST00000505054 F8W1H4 67 aa8.9□□□□□ -0.98
SYNE4-207ENST00000505054 C8orf87E5RJ46 101 aa8.89□□□□□ -0.99
SYNE4-207ENST00000505054 A8MWP4 228 aa8.88□□□□□ -0.99
SYNE4-207ENST00000505054 IGKV3D-7A0A0C4DH55 119 aa8.87□□□□□ -0.99
SYNE4-207ENST00000505054 ATP11AUNQ6ZP68 121 aa8.87□□□□□ -0.99
SYNE4-207ENST00000505054 NDUFB1O75438 58 aa8.86□□□□□ -0.99
SYNE4-207ENST00000505054 ETDBQ3ZM63 59 aa8.85□□□□□ -0.99
SYNE4-207ENST00000505054 Q6ZVQ6 151 aa8.83□□□□□ -1
SYNE4-207ENST00000505054 LORP23490 312 aaPredicted RBP8.82□□□□□ -1
SYNE4-207ENST00000505054 PRR15Q8IV56 129 aa8.82□□□□□ -1
SYNE4-207ENST00000505054 C8orf17Q9NRJ1 99 aa8.82□□□□□ -1
SYNE4-207ENST00000505054 LINC00846Q9NV44 126 aa8.81□□□□□ -1
SYNE4-207ENST00000505054 KRTAP10-6P60371 365 aaPredicted RBP8.8□□□□□ -1
SYNE4-207ENST00000505054 BPY2O14599 106 aa8.79□□□□□ -1
SYNE4-207ENST00000505054 K7EQZ3 153 aa8.78□□□□□ -1
SYNE4-207ENST00000505054 A0A1B0GV90 55 aa8.77□□□□□ -1.01
SYNE4-207ENST00000505054 MMP24-AS1A0A0U1RRL7 71 aa8.76□□□□□ -1.01
SYNE4-207ENST00000505054 UBL5Q9BZL1 73 aa8.75□□□□□ -1.01
SYNE4-207ENST00000505054 Q8N9P0 234 aaPredicted RBP8.74□□□□□ -1.01
SYNE4-207ENST00000505054 Q8N9L7 120 aa8.72□□□□□ -1.01
SYNE4-207ENST00000505054 M0R2T5 61 aa8.71□□□□□ -1.02
SYNE4-207ENST00000505054 FLGP20930 4061 aaPredicted RBP8.7□□□□□ -1.02
SYNE4-207ENST00000505054 TMEM254Q8TBM7 123 aa8.69□□□□□ -1.02
SYNE4-207ENST00000505054 COX6B2Q6YFQ2 88 aa8.68□□□□□ -1.02
SYNE4-207ENST00000505054 ZCCHC13Q8WW36 166 aaKnown RBP8.68□□□□□ -1.02
SYNE4-207ENST00000505054 hDV103S1A0JD37 113 aa8.67□□□□□ -1.02
SYNE4-207ENST00000505054 MRPL34Q9BQ48 92 aaKnown RBP8.67□□□□□ -1.02
SYNE4-207ENST00000505054 WFDC13Q8IUB5 93 aa8.62□□□□□ -1.03
SYNE4-207ENST00000505054 FAM240AA0A1B0GVK7 77 aa8.61□□□□□ -1.03
SYNE4-207ENST00000505054 ACYP1P07311 99 aa8.6□□□□□ -1.03
SYNE4-207ENST00000505054 CASC2Q6XLA1 102 aa8.6□□□□□ -1.03
SYNE4-207ENST00000505054 CXCL6P80162 114 aa8.59□□□□□ -1.03
SYNE4-207ENST00000505054 HRES1P13985 223 aa8.58□□□□□ -1.04
SYNE4-207ENST00000505054 NDUFS5O43920 106 aa8.57□□□□□ -1.04
SYNE4-207ENST00000505054 HCG22E2RYF7 251 aa8.56□□□□□ -1.04
SYNE4-207ENST00000505054 MPLKIPQ8TAP9 179 aa8.55□□□□□ -1.04
SYNE4-207ENST00000505054 SPINK7P58062 85 aa8.54□□□□□ -1.04
SYNE4-207ENST00000505054 KRTAP9-7A8MTY7 169 aa8.51□□□□□ -1.05
SYNE4-207ENST00000505054 Q5W150 140 aa8.51□□□□□ -1.05
SYNE4-207ENST00000505054 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.5□□□□□ -1.05
SYNE4-207ENST00000505054 ATP5EP2Q5VTU8 51 aa8.48□□□□□ -1.05
SYNE4-207ENST00000505054 RBM12B-AS1Q9P1G2 102 aa8.46□□□□□ -1.06
SYNE4-207ENST00000505054 FAM236DA0A1B0GTK5 79 aa8.43□□□□□ -1.06
SYNE4-207ENST00000505054 FAM236CP0DP71 79 aa8.43□□□□□ -1.06
SYNE4-207ENST00000505054 LINC00643Q86TS7 51 aa8.43□□□□□ -1.06
SYNE4-207ENST00000505054 IGKV2D-30A0A075B6S6 120 aa8.4□□□□□ -1.06
SYNE4-207ENST00000505054 IGKV2-30P06310 120 aa8.4□□□□□ -1.06
SYNE4-207ENST00000505054 J3QR89 54 aa8.39□□□□□ -1.07
SYNE4-207ENST00000505054 SSPOA2VEC9 5147 aa8.38□□□□□ -1.07
SYNE4-207ENST00000505054 HIST1H4AP62805 103 aaKnown RBP8.38□□□□□ -1.07
SYNE4-207ENST00000505054 C7orf65Q6ZTY9 151 aa8.38□□□□□ -1.07
SYNE4-207ENST00000505054 USH2AO75445 5202 aa8.37□□□□□ -1.07
SYNE4-207ENST00000505054 KRTAP9-8Q9BYQ0 159 aa8.36□□□□□ -1.07
SYNE4-207ENST00000505054 TP53AIP1Q9HCN2 124 aa8.36□□□□□ -1.07
SYNE4-207ENST00000505054 A0A087WVE0 104 aa8.34□□□□□ -1.07
SYNE4-207ENST00000505054 FCGBPQ9Y6R7 5405 aaPredicted RBP8.25□□□□□ -1.09
SYNE4-207ENST00000505054 TRAV22A0A0B4J277 110 aa8.23□□□□□ -1.09
SYNE4-207ENST00000505054 C4orf26Q17RF5 130 aa8.23□□□□□ -1.09
SYNE4-207ENST00000505054 K7ERU9 68 aa8.22□□□□□ -1.09
SYNE4-207ENST00000505054 MT2AP02795 61 aa8.22□□□□□ -1.09
SYNE4-207ENST00000505054 UQCRQO14949 82 aa8.21□□□□□ -1.1
SYNE4-207ENST00000505054 H1FX-AS1Q4G0G2 97 aa8.2□□□□□ -1.1
SYNE4-207ENST00000505054 KRTAP19-1Q8IUB9 90 aa8.19□□□□□ -1.1
SYNE4-207ENST00000505054 CYP4F30PQ9H0H9 118 aa8.17□□□□□ -1.1
SYNE4-207ENST00000505054 LCE2BO14633 110 aa8.16□□□□□ -1.1
SYNE4-207ENST00000505054 LOC101927531A0A1B0GV80 90 aa8.15□□□□□ -1.1
SYNE4-207ENST00000505054 H0Y9P7 68 aa8.15□□□□□ -1.1
SYNE4-207ENST00000505054 MT1FP04733 61 aa8.15□□□□□ -1.1
SYNE4-207ENST00000505054 OCR1Q9BZK8 76 aa8.15□□□□□ -1.1
SYNE4-207ENST00000505054 KRTAP3-1Q9BYR8 98 aa8.14□□□□□ -1.11
SYNE4-207ENST00000505054 MT-ATP8P03928 68 aa8.13□□□□□ -1.11
SYNE4-207ENST00000505054 ATOX1O00244 68 aa8.12□□□□□ -1.11
SYNE4-207ENST00000505054 KRTAP9-3Q9BYQ3 159 aa8.11□□□□□ -1.11
SYNE4-207ENST00000505054 C1orf64Q8NEQ6 169 aa8.1□□□□□ -1.11
SYNE4-207ENST00000505054 IMUPQ9GZP8 106 aa8.1□□□□□ -1.11
SYNE4-207ENST00000505054 KRTAP10-10P60014 251 aa8.08□□□□□ -1.12
SYNE4-207ENST00000505054 SCGB1A1P11684 91 aa8.04□□□□□ -1.12
SYNE4-207ENST00000505054 LINC00208Q96KT6 92 aa8.04□□□□□ -1.12
SYNE4-207ENST00000505054 MACF1Q9UPN3 7388 aaKnown RBP8.04□□□□□ -1.12
SYNE4-207ENST00000505054 MP68P56378 58 aa8.02□□□□□ -1.13
SYNE4-207ENST00000505054 C5orf47Q569G3 176 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms