RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 RPS28P62857 69 aaKnown RBP2.74□□□□□ -1.97
CDH9-203ENST00000505045 LINC00483Q53H64 154 aa2.74□□□□□ -1.97
CDH9-203ENST00000505045 Q6ZRX8 168 aa2.74□□□□□ -1.97
CDH9-203ENST00000505045 IGLV9-49A0A0B4J1Y8 123 aa2.73□□□□□ -1.97
CDH9-203ENST00000505045 J3KT08 172 aa2.73□□□□□ -1.97
CDH9-203ENST00000505045 IGLV6-57P01721 117 aa2.73□□□□□ -1.97
CDH9-203ENST00000505045 COX7CP15954 63 aa2.73□□□□□ -1.97
CDH9-203ENST00000505045 MOBPQ13875 183 aa2.73□□□□□ -1.97
CDH9-203ENST00000505045 GAGE2AQ6NT46 116 aa2.73□□□□□ -1.97
CDH9-203ENST00000505045 TRAV23DV6A0A075B6W5 121 aa2.72□□□□□ -1.97
CDH9-203ENST00000505045 TRACP01848 142 aa2.72□□□□□ -1.97
CDH9-203ENST00000505045 ST20-AS1Q8NBB2 130 aa2.72□□□□□ -1.97
CDH9-203ENST00000505045 OR13C6PQ8NH95 151 aa2.72□□□□□ -1.97
CDH9-203ENST00000505045 COPS9Q8WXC6 57 aa2.72□□□□□ -1.97
CDH9-203ENST00000505045 ZNF706Q9Y5V0 76 aaPredicted RBP2.72□□□□□ -1.97
CDH9-203ENST00000505045 ATOX1O00244 68 aa2.72□□□□□ -1.97
CDH9-203ENST00000505045 NDUFC2O95298 119 aa2.72□□□□□ -1.97
CDH9-203ENST00000505045 BAALC-AS2P0C853 105 aa2.72□□□□□ -1.97
CDH9-203ENST00000505045 KRTAP13-3Q3SY46 172 aa2.72□□□□□ -1.97
CDH9-203ENST00000505045 KRTAP4-1Q9BYQ7 146 aa2.72□□□□□ -1.97
CDH9-203ENST00000505045 ZNF73O43830 326 aaPredicted RBP2.71□□□□□ -1.98
CDH9-203ENST00000505045 HIST1H4AP62805 103 aaKnown RBP2.71□□□□□ -1.98
CDH9-203ENST00000505045 Q8N377 158 aa2.71□□□□□ -1.98
CDH9-203ENST00000505045 S100A7L2Q5SY68 101 aa2.7□□□□□ -1.98
CDH9-203ENST00000505045 Q6JHZ5 121 aa2.7□□□□□ -1.98
CDH9-203ENST00000505045 SPAG11AQ6PDA7 123 aa2.7□□□□□ -1.98
CDH9-203ENST00000505045 LINC00308Q8TCZ7 52 aa2.7□□□□□ -1.98
CDH9-203ENST00000505045 TMEM258P61165 79 aa2.7□□□□□ -1.98
CDH9-203ENST00000505045 SPINK1P00995 79 aa2.69□□□□□ -1.98
CDH9-203ENST00000505045 FP248Q71RG6 208 aaPredicted RBP2.69□□□□□ -1.98
CDH9-203ENST00000505045 TRAV13-2A0A0B4J235 113 aa2.68□□□□□ -1.98
CDH9-203ENST00000505045 hADV29S1A0JD25 119 aa2.68□□□□□ -1.98
CDH9-203ENST00000505045 SERP2Q8N6R1 65 aa2.68□□□□□ -1.98
CDH9-203ENST00000505045 A0A0G2JQZ4 141 aa2.68□□□□□ -1.98
CDH9-203ENST00000505045 ELOF1P60002 83 aaKnown RBP2.68□□□□□ -1.98
CDH9-203ENST00000505045 C6orf99Q4VX62 202 aa2.68□□□□□ -1.98
CDH9-203ENST00000505045 A0A0U1RQV1 116 aa2.67□□□□□ -1.98
CDH9-203ENST00000505045 H0YGX0 51 aa2.67□□□□□ -1.98
CDH9-203ENST00000505045 RPS29P62273 56 aaKnown RBP2.67□□□□□ -1.98
CDH9-203ENST00000505045 ASB16-AS1Q495Z4 193 aa2.67□□□□□ -1.98
CDH9-203ENST00000505045 HRCT1Q6UXD1 115 aa2.67□□□□□ -1.98
CDH9-203ENST00000505045 SSBP3-AS1Q7Z2R9 100 aa2.67□□□□□ -1.98
CDH9-203ENST00000505045 OBSCN-AS1Q96MR7 158 aa2.67□□□□□ -1.98
CDH9-203ENST00000505045 FAM218AQ96MZ4 157 aa2.67□□□□□ -1.98
CDH9-203ENST00000505045 DNAL4O96015 105 aa2.66□□□□□ -1.98
CDH9-203ENST00000505045 SPRR1BP22528 89 aa2.66□□□□□ -1.98
CDH9-203ENST00000505045 LINC01547P58512 204 aaPredicted RBP2.66□□□□□ -1.98
CDH9-203ENST00000505045 FSIP2Q5CZC0 6907 aa2.66□□□□□ -1.98
CDH9-203ENST00000505045 IGKV3D-7A0A0C4DH55 119 aa2.65□□□□□ -1.98
CDH9-203ENST00000505045 COX7BP24311 80 aa2.65□□□□□ -1.98
CDH9-203ENST00000505045 CCKP06307 115 aa2.65□□□□□ -1.99
CDH9-203ENST00000505045 KRTAP19-2Q3LHN2 52 aa2.65□□□□□ -1.99
CDH9-203ENST00000505045 ATP5EP2Q5VTU8 51 aa2.65□□□□□ -1.99
CDH9-203ENST00000505045 Q5XG85 94 aa2.65□□□□□ -1.99
CDH9-203ENST00000505045 DEFB105AQ8NG35 78 aa2.65□□□□□ -1.99
CDH9-203ENST00000505045 CYSTM1Q9H1C7 97 aa2.65□□□□□ -1.99
CDH9-203ENST00000505045 C14orf132Q9NPU4 83 aa2.65□□□□□ -1.99
CDH9-203ENST00000505045 LINC00846Q9NV44 126 aa2.65□□□□□ -1.99
CDH9-203ENST00000505045 DHRS4-AS1Q9P1J3 65 aa2.65□□□□□ -1.99
CDH9-203ENST00000505045 C9orf92A6NGG3 77 aa2.64□□□□□ -1.99
CDH9-203ENST00000505045 SMIM11BQ8TCY0 68 aa2.64□□□□□ -1.99
CDH9-203ENST00000505045 IGLV5-48A0A075B6I7 105 aa2.63□□□□□ -1.99
CDH9-203ENST00000505045 C4orf26Q17RF5 130 aa2.63□□□□□ -1.99
CDH9-203ENST00000505045 DSCR8Q96T75 97 aa2.63□□□□□ -1.99
CDH9-203ENST00000505045 ORMDL1Q9P0S3 153 aa2.63□□□□□ -1.99
CDH9-203ENST00000505045 A0A087WVE0 104 aa2.63□□□□□ -1.99
CDH9-203ENST00000505045 JMJD7-PLA2G4BH0Y9G9 81 aa2.63□□□□□ -1.99
CDH9-203ENST00000505045 SERP1Q9Y6X1 66 aa2.63□□□□□ -1.99
CDH9-203ENST00000505045 FLGP20930 4061 aaPredicted RBP2.62□□□□□ -1.99
CDH9-203ENST00000505045 FAM236DA0A1B0GTK5 79 aa2.62□□□□□ -1.99
CDH9-203ENST00000505045 FAM236CP0DP71 79 aa2.62□□□□□ -1.99
CDH9-203ENST00000505045 SEC61BP60468 96 aaKnown RBP2.62□□□□□ -1.99
CDH9-203ENST00000505045 LAMTOR3Q9UHA4 124 aa2.62□□□□□ -1.99
CDH9-203ENST00000505045 TRAV7A0A075B6U4 112 aa2.61□□□□□ -1.99
CDH9-203ENST00000505045 TRBV7-6A0A0J9YX20 115 aa2.61□□□□□ -1.99
CDH9-203ENST00000505045 PCOTHQ58A44 107 aa2.61□□□□□ -1.99
CDH9-203ENST00000505045 LIMD2Q9BT23 127 aa2.61□□□□□ -1.99
CDH9-203ENST00000505045 TMEM256-PLSCR3K7ERE1 68 aa2.61□□□□□ -1.99
CDH9-203ENST00000505045 C1orf195Q5TG92 126 aa2.61□□□□□ -1.99
CDH9-203ENST00000505045 SMIM26A0A096LP01 95 aa2.6□□□□□ -1.99
CDH9-203ENST00000505045 MT1HP80294 61 aa2.6□□□□□ -1.99
CDH9-203ENST00000505045 CD164Q04900 197 aa2.6□□□□□ -1.99
CDH9-203ENST00000505045 Q6ZQY7 126 aa2.6□□□□□ -1.99
CDH9-203ENST00000505045 C20orf197Q8N268 126 aa2.6□□□□□ -1.99
CDH9-203ENST00000505045 UBL5Q9BZL1 73 aa2.6□□□□□ -1.99
CDH9-203ENST00000505045 PRO0628Q9UI54 55 aa2.6□□□□□ -1.99
CDH9-203ENST00000505045 IGLV8-61A0A075B6I0 122 aa2.59□□□□□ -1.99
CDH9-203ENST00000505045 LINC00575Q6W349 94 aa2.59□□□□□ -1.99
CDH9-203ENST00000505045 LOC110117498A0A087WWA1 95 aa2.58□□□□□ -2
CDH9-203ENST00000505045 H3BQ85 93 aa2.58□□□□□ -2
CDH9-203ENST00000505045 H7BZZ5 65 aa2.58□□□□□ -2
CDH9-203ENST00000505045 ATP5EP56381 51 aaPredicted RBP2.58□□□□□ -2
CDH9-203ENST00000505045 KLKP1Q107X0 134 aa2.58□□□□□ -2
CDH9-203ENST00000505045 NDUFC1O43677 76 aa2.58□□□□□ -2
CDH9-203ENST00000505045 PDE6GP18545 87 aa2.58□□□□□ -2
CDH9-203ENST00000505045 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
CDH9-203ENST00000505045 IGFL1Q6UW32 110 aa2.58□□□□□ -2
CDH9-203ENST00000505045 Q6ZQT0 140 aa2.58□□□□□ -2
CDH9-203ENST00000505045 RPL37P61927 97 aaKnown RBP2.57□□□□□ -2
CDH9-203ENST00000505045 RBM3P98179 157 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms