RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 CELSR2Q9HCU4 2923 aa3.17□□□□□ -1.9
CDH9-202ENST00000505020 PDZD2O15018 2839 aa3.17□□□□□ -1.9
CDH9-202ENST00000505020 SPENQ96T58 3664 aaKnown RBP3.17□□□□□ -1.9
CDH9-202ENST00000505020 K7EIL1 84 aa3.16□□□□□ -1.9
CDH9-202ENST00000505020 CRYBG3Q68DQ2 2970 aa3.16□□□□□ -1.9
CDH9-202ENST00000505020 WFDC13Q8IUB5 93 aa3.16□□□□□ -1.9
CDH9-202ENST00000505020 CCDC168Q8NDH2 2452 aa3.15□□□□□ -1.9
CDH9-202ENST00000505020 KRTAP10-12P60413 245 aa3.15□□□□□ -1.91
CDH9-202ENST00000505020 LINC01590Q5TEZ4 76 aa3.15□□□□□ -1.91
CDH9-202ENST00000505020 Q6ZSA8 131 aa3.15□□□□□ -1.91
CDH9-202ENST00000505020 CELSR1Q9NYQ6 3014 aa3.15□□□□□ -1.91
CDH9-202ENST00000505020 FLG2Q5D862 2391 aaPredicted RBP3.15□□□□□ -1.91
CDH9-202ENST00000505020 APCP25054 2843 aa3.15□□□□□ -1.91
CDH9-202ENST00000505020 POLR2KP53803 58 aaKnown RBP3.14□□□□□ -1.91
CDH9-202ENST00000505020 ADGRG4Q8IZF6 3080 aa3.14□□□□□ -1.91
CDH9-202ENST00000505020 RP1L1Q8IWN7 2480 aaPredicted RBP3.14□□□□□ -1.91
CDH9-202ENST00000505020 AKAP9Q99996 3911 aa3.14□□□□□ -1.91
CDH9-202ENST00000505020 U3KQA8 63 aa3.14□□□□□ -1.91
CDH9-202ENST00000505020 NBEAL1Q6ZS30 2694 aa3.14□□□□□ -1.91
CDH9-202ENST00000505020 JMJD1CQ15652 2540 aa3.14□□□□□ -1.91
CDH9-202ENST00000505020 BOD1L1Q8NFC6 3051 aa3.13□□□□□ -1.91
CDH9-202ENST00000505020 NIPBLQ6KC79 2804 aaeCLIP3.12□□□□□ -1.91
CDH9-202ENST00000505020 RPL39P62891 51 aaKnown RBP3.12□□□□□ -1.91
CDH9-202ENST00000505020 WFDC10BQ8IUB3 73 aa3.12□□□□□ -1.91
CDH9-202ENST00000505020 CSPG4Q6UVK1 2322 aa3.11□□□□□ -1.91
CDH9-202ENST00000505020 RPS27P42677 84 aaKnown RBP3.11□□□□□ -1.91
CDH9-202ENST00000505020 KRTAP12-1P59990 96 aa3.1□□□□□ -1.91
CDH9-202ENST00000505020 STAB1Q9NY15 2570 aa3.1□□□□□ -1.91
CDH9-202ENST00000505020 FBN1P35555 2871 aaKnown RBP3.1□□□□□ -1.91
CDH9-202ENST00000505020 ATRQ13535 2644 aa3.1□□□□□ -1.91
CDH9-202ENST00000505020 DEFB109BQ30KR1 87 aa3.09□□□□□ -1.91
CDH9-202ENST00000505020 H3BSH0 61 aa3.09□□□□□ -1.92
CDH9-202ENST00000505020 RPL39LQ96EH5 51 aaKnown RBP3.08□□□□□ -1.92
CDH9-202ENST00000505020 COL6A5A8TX70 2615 aa3.08□□□□□ -1.92
CDH9-202ENST00000505020 DEFB130BP0DP73 79 aa3.07□□□□□ -1.92
CDH9-202ENST00000505020 DEFB130AP0DP74 79 aa3.07□□□□□ -1.92
CDH9-202ENST00000505020 DEFB133Q30KQ1 61 aa3.07□□□□□ -1.92
CDH9-202ENST00000505020 H1FX-AS1Q4G0G2 97 aa3.07□□□□□ -1.92
CDH9-202ENST00000505020 ACANP16112 2415 aa3.06□□□□□ -1.92
CDH9-202ENST00000505020 IGLV5-48A0A075B6I7 105 aa3.06□□□□□ -1.92
CDH9-202ENST00000505020 PKDREJQ9NTG1 2253 aa3.06□□□□□ -1.92
CDH9-202ENST00000505020 KRTAP13-3Q3SY46 172 aa3.05□□□□□ -1.92
CDH9-202ENST00000505020 CSMD2Q7Z408 3487 aa3.05□□□□□ -1.92
CDH9-202ENST00000505020 PRO0255Q9UI72 69 aa3.05□□□□□ -1.92
CDH9-202ENST00000505020 APLNQ9ULZ1 77 aa3.05□□□□□ -1.92
CDH9-202ENST00000505020 KAAG1Q9UBP8 84 aa3.04□□□□□ -1.92
CDH9-202ENST00000505020 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
CDH9-202ENST00000505020 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.92
CDH9-202ENST00000505020 SPRR1AP35321 89 aa3.03□□□□□ -1.93
CDH9-202ENST00000505020 NSD1Q96L73 2696 aaPredicted RBP3.02□□□□□ -1.93
CDH9-202ENST00000505020 CNTRLQ7Z7A1 2325 aa3.02□□□□□ -1.93
CDH9-202ENST00000505020 SMR3AQ99954 134 aa3.02□□□□□ -1.93
CDH9-202ENST00000505020 ZNF469Q96JG9 3925 aaPredicted RBP3.01□□□□□ -1.93
CDH9-202ENST00000505020 TACC2O95359 2948 aa3□□□□□ -1.93
CDH9-202ENST00000505020 SPINK9Q5DT21 86 aa2.98□□□□□ -1.93
CDH9-202ENST00000505020 LEAP2Q969E1 77 aa2.98□□□□□ -1.93
CDH9-202ENST00000505020 FLNAP21333 2647 aaKnown RBP2.98□□□□□ -1.93
CDH9-202ENST00000505020 PLCE1Q9P212 2302 aa2.98□□□□□ -1.93
CDH9-202ENST00000505020 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
CDH9-202ENST00000505020 DCHS2Q6V1P9 2916 aa2.98□□□□□ -1.93
CDH9-202ENST00000505020 NOTCH1P46531 2555 aa2.97□□□□□ -1.93
CDH9-202ENST00000505020 KRTAP10-10P60014 251 aa2.97□□□□□ -1.93
CDH9-202ENST00000505020 DEFB105AQ8NG35 78 aa2.97□□□□□ -1.93
CDH9-202ENST00000505020 HIVEP2P31629 2446 aa2.97□□□□□ -1.93
CDH9-202ENST00000505020 PRRC2CQ9Y520 2896 aaKnown RBP2.97□□□□□ -1.93
CDH9-202ENST00000505020 WNK2Q9Y3S1 2297 aa2.96□□□□□ -1.93
CDH9-202ENST00000505020 MXRA5Q9NR99 2828 aa2.96□□□□□ -1.93
CDH9-202ENST00000505020 ANK2Q01484 3957 aa2.95□□□□□ -1.94
CDH9-202ENST00000505020 TLN2Q9Y4G6 2542 aa2.95□□□□□ -1.94
CDH9-202ENST00000505020 PKD1L1Q8TDX9 2849 aa2.95□□□□□ -1.94
CDH9-202ENST00000505020 WT1-ASQ06250 92 aa2.94□□□□□ -1.94
CDH9-202ENST00000505020 MMP24-AS1A0A0U1RRL7 71 aa2.93□□□□□ -1.94
CDH9-202ENST00000505020 MAP1AP78559 2803 aaPredicted RBP2.93□□□□□ -1.94
CDH9-202ENST00000505020 AKAP6Q13023 2319 aa2.92□□□□□ -1.94
CDH9-202ENST00000505020 Q5VSD8 79 aa2.92□□□□□ -1.94
CDH9-202ENST00000505020 MEGF8Q7Z7M0 2845 aa2.92□□□□□ -1.94
CDH9-202ENST00000505020 SONP18583 2426 aaKnown RBP2.92□□□□□ -1.94
CDH9-202ENST00000505020 TGP01266 2768 aa2.91□□□□□ -1.94
CDH9-202ENST00000505020 KRTAP6-3Q3LI67 103 aa2.91□□□□□ -1.94
CDH9-202ENST00000505020 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
CDH9-202ENST00000505020 DEFB131AP59861 70 aa2.91□□□□□ -1.94
CDH9-202ENST00000505020 CUBNO60494 3623 aa2.9□□□□□ -1.94
CDH9-202ENST00000505020 NOTCH3Q9UM47 2321 aa2.9□□□□□ -1.95
CDH9-202ENST00000505020 NBEAL2Q6ZNJ1 2754 aa2.9□□□□□ -1.95
CDH9-202ENST00000505020 BIRC6Q9NR09 4857 aa2.9□□□□□ -1.95
CDH9-202ENST00000505020 USF3Q68DE3 2245 aa2.89□□□□□ -1.95
CDH9-202ENST00000505020 SPRR1BP22528 89 aa2.89□□□□□ -1.95
CDH9-202ENST00000505020 PRCDQ00LT1 54 aa2.89□□□□□ -1.95
CDH9-202ENST00000505020 VPS13CQ709C8 3753 aa2.89□□□□□ -1.95
CDH9-202ENST00000505020 MGAM2Q2M2H8 2515 aa2.89□□□□□ -1.95
CDH9-202ENST00000505020 RYR3Q15413 4870 aa2.88□□□□□ -1.95
CDH9-202ENST00000505020 ANK3Q12955 4377 aaKnown RBP2.88□□□□□ -1.95
CDH9-202ENST00000505020 KMT2CQ8NEZ4 4911 aaKnown RBP2.87□□□□□ -1.95
CDH9-202ENST00000505020 ROS1P08922 2347 aa2.86□□□□□ -1.95
CDH9-202ENST00000505020 KLK9Q2XQG4 91 aa2.86□□□□□ -1.95
CDH9-202ENST00000505020 WNK1Q9H4A3 2382 aa2.85□□□□□ -1.95
CDH9-202ENST00000505020 ZANQ9Y493 2812 aa2.84□□□□□ -1.96
CDH9-202ENST00000505020 H3BUA1 57 aa2.84□□□□□ -1.96
CDH9-202ENST00000505020 M0QY20 66 aa2.84□□□□□ -1.96
CDH9-202ENST00000505020 COX14Q96I36 57 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms