RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 HSBP1L1C9JCN9 74 aa1.25□□□□□ -2.21
RFC1-209ENST00000504974 S100A6P06703 90 aa1.25□□□□□ -2.21
RFC1-209ENST00000504974 IFITM1P13164 125 aa1.25□□□□□ -2.21
RFC1-209ENST00000504974 HINT1P49773 126 aaPredicted RBP1.25□□□□□ -2.21
RFC1-209ENST00000504974 NPC2P61916 151 aa1.25□□□□□ -2.21
RFC1-209ENST00000504974 JOSD1Q15040 202 aaPredicted RBP1.25□□□□□ -2.21
RFC1-209ENST00000504974 ATOH7Q8N100 152 aa1.25□□□□□ -2.21
RFC1-209ENST00000504974 HIST3H2BBQ8N257 126 aa1.25□□□□□ -2.21
RFC1-209ENST00000504974 LINC00308Q8TCZ7 52 aa1.25□□□□□ -2.21
RFC1-209ENST00000504974 SMCR5Q8TEV8 140 aa1.25□□□□□ -2.21
RFC1-209ENST00000504974 HIST1H2BLQ99880 126 aa1.25□□□□□ -2.21
RFC1-209ENST00000504974 TTTY13Q9BZ97 58 aa1.25□□□□□ -2.21
RFC1-209ENST00000504974 ELOF1P60002 83 aaKnown RBP1.24□□□□□ -2.21
RFC1-209ENST00000504974 RPS29P62273 56 aaKnown RBP1.24□□□□□ -2.21
RFC1-209ENST00000504974 C9orf153Q5TBE3 101 aa1.24□□□□□ -2.21
RFC1-209ENST00000504974 SPAG11AQ6PDA7 123 aa1.24□□□□□ -2.21
RFC1-209ENST00000504974 OR13C6PQ8NH95 151 aa1.24□□□□□ -2.21
RFC1-209ENST00000504974 Q9BRP9 147 aa1.24□□□□□ -2.21
RFC1-209ENST00000504974 TRAV13-2A0A0B4J235 113 aa1.23□□□□□ -2.21
RFC1-209ENST00000504974 TRBV7-6A0A0J9YX20 115 aa1.23□□□□□ -2.21
RFC1-209ENST00000504974 ERC2-IT1O76042 136 aa1.23□□□□□ -2.21
RFC1-209ENST00000504974 SPINK1P00995 79 aa1.23□□□□□ -2.21
RFC1-209ENST00000504974 SPRR1BP22528 89 aa1.23□□□□□ -2.21
RFC1-209ENST00000504974 COX7BP24311 80 aa1.23□□□□□ -2.21
RFC1-209ENST00000504974 TPRXLQ17RH7 258 aa1.23□□□□□ -2.21
RFC1-209ENST00000504974 FP248Q71RG6 208 aaPredicted RBP1.23□□□□□ -2.21
RFC1-209ENST00000504974 SSBP3-AS1Q7Z2R9 100 aa1.23□□□□□ -2.21
RFC1-209ENST00000504974 MUSTN1Q8IVN3 82 aa1.23□□□□□ -2.21
RFC1-209ENST00000504974 RETNLBQ9BQ08 111 aa1.23□□□□□ -2.21
RFC1-209ENST00000504974 TEX49A0A1B0GTD5 131 aa1.22□□□□□ -2.21
RFC1-209ENST00000504974 DLEU1O43261 78 aa1.22□□□□□ -2.21
RFC1-209ENST00000504974 COX8AP10176 69 aa1.22□□□□□ -2.21
RFC1-209ENST00000504974 LINC00313P59037 77 aa1.22□□□□□ -2.21
RFC1-209ENST00000504974 PCOTHQ58A44 107 aa1.22□□□□□ -2.21
RFC1-209ENST00000504974 SMIM11BQ8TCY0 68 aa1.22□□□□□ -2.21
RFC1-209ENST00000504974 NHP2Q9NX24 153 aaKnown RBP1.22□□□□□ -2.21
RFC1-209ENST00000504974 LAMTOR3Q9UHA4 124 aa1.22□□□□□ -2.21
RFC1-209ENST00000504974 IGLV5-48A0A075B6I7 105 aa1.21□□□□□ -2.22
RFC1-209ENST00000504974 F8WEM9 126 aa1.21□□□□□ -2.22
RFC1-209ENST00000504974 H3BPC8 53 aa1.21□□□□□ -2.22
RFC1-209ENST00000504974 SPATA45Q537H7 98 aa1.21□□□□□ -2.22
RFC1-209ENST00000504974 BVES-AS1Q5T3Y7 98 aa1.21□□□□□ -2.22
RFC1-209ENST00000504974 LIMD2Q9BT23 127 aa1.21□□□□□ -2.22
RFC1-209ENST00000504974 VAMP8Q9BV40 100 aa1.21□□□□□ -2.22
RFC1-209ENST00000504974 HIGD1BQ9P298 99 aa1.21□□□□□ -2.22
RFC1-209ENST00000504974 SYNE2Q8WXH0 6885 aaKnown RBP1.21□□□□□ -2.22
RFC1-209ENST00000504974 A0A0G2JQZ4 141 aa1.2□□□□□ -2.22
RFC1-209ENST00000504974 hADV29S1A0JD25 119 aa1.2□□□□□ -2.22
RFC1-209ENST00000504974 H7C2G1 150 aa1.2□□□□□ -2.22
RFC1-209ENST00000504974 M0R2T5 61 aa1.2□□□□□ -2.22
RFC1-209ENST00000504974 C4orf26Q17RF5 130 aa1.2□□□□□ -2.22
RFC1-209ENST00000504974 Q5XG85 94 aa1.2□□□□□ -2.22
RFC1-209ENST00000504974 HRCT1Q6UXD1 115 aa1.2□□□□□ -2.22
RFC1-209ENST00000504974 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.2□□□□□ -2.22
RFC1-209ENST00000504974 LINC00575Q6W349 94 aa1.2□□□□□ -2.22
RFC1-209ENST00000504974 Q6ZQY7 126 aa1.2□□□□□ -2.22
RFC1-209ENST00000504974 C2orf91Q6ZV80 131 aa1.2□□□□□ -2.22
RFC1-209ENST00000504974 DEFB105AQ8NG35 78 aa1.2□□□□□ -2.22
RFC1-209ENST00000504974 PPDPFLQ8WWR9 84 aa1.2□□□□□ -2.22
RFC1-209ENST00000504974 RAB37Q96AX2 223 aa1.2□□□□□ -2.22
RFC1-209ENST00000504974 C14orf144Q96I85 54 aa1.2□□□□□ -2.22
RFC1-209ENST00000504974 C12orf57Q99622 126 aa1.2□□□□□ -2.22
RFC1-209ENST00000504974 PRO1933Q9H354 126 aa1.2□□□□□ -2.22
RFC1-209ENST00000504974 A0A1B0GX51 115 aa1.19□□□□□ -2.22
RFC1-209ENST00000504974 SNCGO76070 127 aa1.19□□□□□ -2.22
RFC1-209ENST00000504974 FXYD2P54710 66 aa1.19□□□□□ -2.22
RFC1-209ENST00000504974 HSD52Q0P140 79 aa1.19□□□□□ -2.22
RFC1-209ENST00000504974 KRTAP13-4Q3LI77 160 aa1.19□□□□□ -2.22
RFC1-209ENST00000504974 OCIAD2Q56VL3 154 aa1.19□□□□□ -2.22
RFC1-209ENST00000504974 PYY3Q5JQD4 70 aa1.19□□□□□ -2.22
RFC1-209ENST00000504974 Q6JHZ5 121 aa1.19□□□□□ -2.22
RFC1-209ENST00000504974 CLEC2BQ92478 149 aa1.19□□□□□ -2.22
RFC1-209ENST00000504974 UQCR10Q9UDW1 63 aa1.19□□□□□ -2.22
RFC1-209ENST00000504974 FCGBPQ9Y6R7 5405 aaPredicted RBP1.18□□□□□ -2.22
RFC1-209ENST00000504974 TRBV7-7A0A0K0K1E9 115 aa1.18□□□□□ -2.22
RFC1-209ENST00000504974 H0YGX0 51 aa1.18□□□□□ -2.22
RFC1-209ENST00000504974 TCL1BO95988 128 aa1.18□□□□□ -2.22
RFC1-209ENST00000504974 KRTAP20-1Q3LI63 56 aa1.18□□□□□ -2.22
RFC1-209ENST00000504974 ASB16-AS1Q495Z4 193 aa1.18□□□□□ -2.22
RFC1-209ENST00000504974 SNHG12Q9BXW3 62 aa1.18□□□□□ -2.22
RFC1-209ENST00000504974 PRO1854Q9UHT4 67 aa1.18□□□□□ -2.22
RFC1-209ENST00000504974 SSPOA2VEC9 5147 aa1.18□□□□□ -2.22
RFC1-209ENST00000504974 C9orf92A6NGG3 77 aa1.17□□□□□ -2.22
RFC1-209ENST00000504974 H3BUT2 72 aa1.17□□□□□ -2.22
RFC1-209ENST00000504974 K7ERJ3 54 aa1.17□□□□□ -2.22
RFC1-209ENST00000504974 DNAL4O96015 105 aa1.17□□□□□ -2.22
RFC1-209ENST00000504974 COX6CP09669 75 aa1.17□□□□□ -2.22
RFC1-209ENST00000504974 C1orf195Q5TG92 126 aa1.17□□□□□ -2.22
RFC1-209ENST00000504974 Q6Q795 121 aa1.17□□□□□ -2.22
RFC1-209ENST00000504974 LINC00846Q9NV44 126 aa1.17□□□□□ -2.22
RFC1-209ENST00000504974 SS18L2Q9UHA2 77 aa1.17□□□□□ -2.22
RFC1-209ENST00000504974 MUC17Q685J3 4493 aa1.17□□□□□ -2.22
RFC1-209ENST00000504974 H3BMG7 143 aa1.16□□□□□ -2.22
RFC1-209ENST00000504974 TMEM256-PLSCR3K7ERE1 68 aa1.16□□□□□ -2.22
RFC1-209ENST00000504974 M0R143 59 aa1.16□□□□□ -2.22
RFC1-209ENST00000504974 LST1O00453 97 aa1.16□□□□□ -2.22
RFC1-209ENST00000504974 SMIM6P0DI80 62 aa1.16□□□□□ -2.22
RFC1-209ENST00000504974 FABP2P12104 132 aa1.16□□□□□ -2.22
RFC1-209ENST00000504974 RPL37P61927 97 aaKnown RBP1.16□□□□□ -2.22
RFC1-209ENST00000504974 MT1HP80294 61 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms