RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 DSCR10P59022 87 aa13.35□□□□□ -0.27
PVT1-201ENST00000504719 A0A1B0GW54 56 aa13.3□□□□□ -0.28
PVT1-201ENST00000504719 ATP11AUNQ6ZP68 121 aa13.3□□□□□ -0.28
PVT1-201ENST00000504719 LINC00313P59037 77 aa13.29□□□□□ -0.28
PVT1-201ENST00000504719 LCE2DQ5TA82 110 aaPredicted RBP13.28□□□□□ -0.28
PVT1-201ENST00000504719 C20orf166-AS1Q96NR2 134 aa13.27□□□□□ -0.29
PVT1-201ENST00000504719 IGHV6-1A0A0B4J1U7 121 aa13.26□□□□□ -0.29
PVT1-201ENST00000504719 A8MUU9 505 aa13.24□□□□□ -0.29
PVT1-201ENST00000504719 NOTCH2NLQ7Z3S9 236 aa13.24□□□□□ -0.29
PVT1-201ENST00000504719 J3KT08 172 aa13.23□□□□□ -0.29
PVT1-201ENST00000504719 COX6B2Q6YFQ2 88 aa13.23□□□□□ -0.29
PVT1-201ENST00000504719 KRTAP9-6A0A140TA67 174 aa13.21□□□□□ -0.29
PVT1-201ENST00000504719 K7EP34 96 aa13.21□□□□□ -0.29
PVT1-201ENST00000504719 SMCPP49901 116 aaPredicted RBP13.21□□□□□ -0.29
PVT1-201ENST00000504719 FLGP20930 4061 aaPredicted RBP13.21□□□□□ -0.3
PVT1-201ENST00000504719 A0A1B0GVX0 72 aa13.2□□□□□ -0.3
PVT1-201ENST00000504719 KRTAP16-1A8MUX0 517 aa13.19□□□□□ -0.3
PVT1-201ENST00000504719 PRO0461Q9UI25 63 aa13.16□□□□□ -0.3
PVT1-201ENST00000504719 C8orf87E5RJ46 101 aa13.15□□□□□ -0.3
PVT1-201ENST00000504719 LORP23490 312 aaPredicted RBP13.15□□□□□ -0.3
PVT1-201ENST00000504719 KRTAP10-6P60371 365 aaPredicted RBP13.15□□□□□ -0.3
PVT1-201ENST00000504719 NREPQ16612 68 aa13.15□□□□□ -0.3
PVT1-201ENST00000504719 M0R2T5 61 aa13.12□□□□□ -0.31
PVT1-201ENST00000504719 NDUFB1O75438 58 aa13.12□□□□□ -0.31
PVT1-201ENST00000504719 A8MWP4 228 aa13.1□□□□□ -0.31
PVT1-201ENST00000504719 GTF2H5Q6ZYL4 71 aa13.09□□□□□ -0.31
PVT1-201ENST00000504719 IGKV3D-7A0A0C4DH55 119 aa13.06□□□□□ -0.32
PVT1-201ENST00000504719 C8orf17Q9NRJ1 99 aa13.01□□□□□ -0.33
PVT1-201ENST00000504719 PRR15Q8IV56 129 aa12.99□□□□□ -0.33
PVT1-201ENST00000504719 F8W1H4 67 aa12.97□□□□□ -0.33
PVT1-201ENST00000504719 Q6ZVQ6 151 aa12.95□□□□□ -0.34
PVT1-201ENST00000504719 BPY2O14599 106 aa12.94□□□□□ -0.34
PVT1-201ENST00000504719 K7EQZ3 153 aa12.92□□□□□ -0.34
PVT1-201ENST00000504719 CRCT1Q9UGL9 99 aa12.92□□□□□ -0.34
PVT1-201ENST00000504719 Q8N9P0 234 aaPredicted RBP12.91□□□□□ -0.34
PVT1-201ENST00000504719 ETDBQ3ZM63 59 aa12.89□□□□□ -0.35
PVT1-201ENST00000504719 MMP24-AS1A0A0U1RRL7 71 aa12.88□□□□□ -0.35
PVT1-201ENST00000504719 LINC00846Q9NV44 126 aa12.88□□□□□ -0.35
PVT1-201ENST00000504719 ZCCHC13Q8WW36 166 aaKnown RBP12.86□□□□□ -0.35
PVT1-201ENST00000504719 UBL5Q9BZL1 73 aa12.84□□□□□ -0.35
PVT1-201ENST00000504719 TMEM254Q8TBM7 123 aa12.82□□□□□ -0.36
PVT1-201ENST00000504719 FSIP2Q5CZC0 6907 aa12.82□□□□□ -0.36
PVT1-201ENST00000504719 Q8N9L7 120 aa12.81□□□□□ -0.36
PVT1-201ENST00000504719 MRPL34Q9BQ48 92 aaKnown RBP12.81□□□□□ -0.36
PVT1-201ENST00000504719 hDV103S1A0JD37 113 aa12.8□□□□□ -0.36
PVT1-201ENST00000504719 HRES1P13985 223 aa12.77□□□□□ -0.37
PVT1-201ENST00000504719 MPLKIPQ8TAP9 179 aa12.76□□□□□ -0.37
PVT1-201ENST00000504719 FAM236DA0A1B0GTK5 79 aa12.73□□□□□ -0.37
PVT1-201ENST00000504719 FAM236CP0DP71 79 aa12.73□□□□□ -0.37
PVT1-201ENST00000504719 RBM12B-AS1Q9P1G2 102 aa12.72□□□□□ -0.37
PVT1-201ENST00000504719 NDUFS5O43920 106 aa12.71□□□□□ -0.37
PVT1-201ENST00000504719 WFDC13Q8IUB5 93 aa12.7□□□□□ -0.38
PVT1-201ENST00000504719 SPINK7P58062 85 aa12.69□□□□□ -0.38
PVT1-201ENST00000504719 KRTAP9-8Q9BYQ0 159 aa12.69□□□□□ -0.38
PVT1-201ENST00000504719 CASC2Q6XLA1 102 aa12.68□□□□□ -0.38
PVT1-201ENST00000504719 A0A1B0GV90 55 aa12.63□□□□□ -0.39
PVT1-201ENST00000504719 CXCL6P80162 114 aa12.59□□□□□ -0.39
PVT1-201ENST00000504719 HCG22E2RYF7 251 aa12.58□□□□□ -0.4
PVT1-201ENST00000504719 ACYP1P07311 99 aa12.56□□□□□ -0.4
PVT1-201ENST00000504719 Q5W150 140 aa12.53□□□□□ -0.4
PVT1-201ENST00000504719 FAM240AA0A1B0GVK7 77 aa12.51□□□□□ -0.41
PVT1-201ENST00000504719 MT2AP02795 61 aa12.49□□□□□ -0.41
PVT1-201ENST00000504719 IGKV2D-30A0A075B6S6 120 aa12.44□□□□□ -0.42
PVT1-201ENST00000504719 IGKV2-30P06310 120 aa12.44□□□□□ -0.42
PVT1-201ENST00000504719 MT1FP04733 61 aa12.4□□□□□ -0.42
PVT1-201ENST00000504719 C7orf65Q6ZTY9 151 aa12.4□□□□□ -0.42
PVT1-201ENST00000504719 ATP5EP2Q5VTU8 51 aa12.37□□□□□ -0.43
PVT1-201ENST00000504719 USH2AO75445 5202 aa12.34□□□□□ -0.43
PVT1-201ENST00000504719 TP53AIP1Q9HCN2 124 aa12.33□□□□□ -0.44
PVT1-201ENST00000504719 KRTAP10-10P60014 251 aa12.32□□□□□ -0.44
PVT1-201ENST00000504719 HIST1H4AP62805 103 aaKnown RBP12.3□□□□□ -0.44
PVT1-201ENST00000504719 KRTAP9-3Q9BYQ3 159 aa12.29□□□□□ -0.44
PVT1-201ENST00000504719 LINC00643Q86TS7 51 aa12.27□□□□□ -0.45
PVT1-201ENST00000504719 SSPOA2VEC9 5147 aa12.24□□□□□ -0.45
PVT1-201ENST00000504719 LCE2BO14633 110 aa12.24□□□□□ -0.45
PVT1-201ENST00000504719 H1FX-AS1Q4G0G2 97 aa12.2□□□□□ -0.46
PVT1-201ENST00000504719 J3QR89 54 aa12.19□□□□□ -0.46
PVT1-201ENST00000504719 C4orf26Q17RF5 130 aa12.19□□□□□ -0.46
PVT1-201ENST00000504719 A0A087WVE0 104 aa12.16□□□□□ -0.46
PVT1-201ENST00000504719 TRAV22A0A0B4J277 110 aa12.1□□□□□ -0.47
PVT1-201ENST00000504719 UQCRQO14949 82 aa12.05□□□□□ -0.48
PVT1-201ENST00000504719 KRTAP19-1Q8IUB9 90 aa12.04□□□□□ -0.48
PVT1-201ENST00000504719 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.03□□□□□ -0.48
PVT1-201ENST00000504719 CYP4F30PQ9H0H9 118 aa12.03□□□□□ -0.48
PVT1-201ENST00000504719 KRTAP3-1Q9BYR8 98 aa12.01□□□□□ -0.49
PVT1-201ENST00000504719 LOC101927531A0A1B0GV80 90 aa12□□□□□ -0.49
PVT1-201ENST00000504719 C1orf64Q8NEQ6 169 aa12□□□□□ -0.49
PVT1-201ENST00000504719 H0Y9P7 68 aa11.98□□□□□ -0.49
PVT1-201ENST00000504719 FCGBPQ9Y6R7 5405 aaPredicted RBP11.96□□□□□ -0.5
PVT1-201ENST00000504719 ATOX1O00244 68 aa11.95□□□□□ -0.5
PVT1-201ENST00000504719 OCR1Q9BZK8 76 aa11.89□□□□□ -0.51
PVT1-201ENST00000504719 KRTAP9-7A8MTY7 169 aa11.88□□□□□ -0.51
PVT1-201ENST00000504719 K7ERU9 68 aa11.88□□□□□ -0.51
PVT1-201ENST00000504719 S4R3F8 94 aa11.87□□□□□ -0.51
PVT1-201ENST00000504719 C5orf47Q569G3 176 aa11.83□□□□□ -0.52
PVT1-201ENST00000504719 KRTAP19-6Q3LI70 58 aa11.82□□□□□ -0.52
PVT1-201ENST00000504719 LINC00208Q96KT6 92 aa11.82□□□□□ -0.52
PVT1-201ENST00000504719 LCA10Q71F78 164 aa11.8□□□□□ -0.52
PVT1-201ENST00000504719 SCGB1A1P11684 91 aa11.79□□□□□ -0.52
PVT1-201ENST00000504719 MP68P56378 58 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms