RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 ADM2Q7Z4H4 148 aa5.26□□□□□ -1.57
CCDC149-204ENST00000504487 ANAPC11Q9NYG5 84 aa5.26□□□□□ -1.57
CCDC149-204ENST00000504487 ANK3Q12955 4377 aaKnown RBP5.25□□□□□ -1.57
CCDC149-204ENST00000504487 SMR3BP02814 79 aaPredicted RBP5.24□□□□□ -1.57
CCDC149-204ENST00000504487 SPRR1BP22528 89 aa5.24□□□□□ -1.57
CCDC149-204ENST00000504487 IGKV2D-30A0A075B6S6 120 aa5.24□□□□□ -1.57
CCDC149-204ENST00000504487 IGKV2-30P06310 120 aa5.24□□□□□ -1.57
CCDC149-204ENST00000504487 A0A087WTM6 91 aa5.23□□□□□ -1.57
CCDC149-204ENST00000504487 FLG2Q5D862 2391 aaPredicted RBP5.23□□□□□ -1.57
CCDC149-204ENST00000504487 Q6ZR54 194 aa5.23□□□□□ -1.57
CCDC149-204ENST00000504487 KRTAP11-1Q8IUC1 163 aa5.21□□□□□ -1.58
CCDC149-204ENST00000504487 CSAG1Q6PB30 78 aa5.2□□□□□ -1.58
CCDC149-204ENST00000504487 A0A087X002 238 aa5.19□□□□□ -1.58
CCDC149-204ENST00000504487 NOTCH2NLQ7Z3S9 236 aa5.19□□□□□ -1.58
CCDC149-204ENST00000504487 FAM229AH3BQW9 127 aa5.19□□□□□ -1.58
CCDC149-204ENST00000504487 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.18□□□□□ -1.58
CCDC149-204ENST00000504487 PLA2G1BP04054 148 aaKnown RBP5.18□□□□□ -1.58
CCDC149-204ENST00000504487 Q5W150 140 aa5.16□□□□□ -1.58
CCDC149-204ENST00000504487 PLAC8Q9NZF1 115 aa5.16□□□□□ -1.58
CCDC149-204ENST00000504487 SPACA4Q8TDM5 124 aa5.15□□□□□ -1.59
CCDC149-204ENST00000504487 Q96NJ1 140 aa5.14□□□□□ -1.59
CCDC149-204ENST00000504487 PSORS1C2Q9UIG4 136 aa5.14□□□□□ -1.59
CCDC149-204ENST00000504487 K7ERS5 55 aa5.14□□□□□ -1.59
CCDC149-204ENST00000504487 SPATA8Q6RVD6 105 aa5.13□□□□□ -1.59
CCDC149-204ENST00000504487 PANO1I0J062 215 aa5.12□□□□□ -1.59
CCDC149-204ENST00000504487 COL7A1Q02388 2944 aa5.12□□□□□ -1.59
CCDC149-204ENST00000504487 ZNF861PO60384 105 aa5.12□□□□□ -1.59
CCDC149-204ENST00000504487 DMAC1Q96GE9 116 aa5.12□□□□□ -1.59
CCDC149-204ENST00000504487 ASB16-AS1Q495Z4 193 aa5.1□□□□□ -1.59
CCDC149-204ENST00000504487 CSMD3Q7Z407 3707 aa5.09□□□□□ -1.6
CCDC149-204ENST00000504487 KRTAP10-2P60368 255 aa5.08□□□□□ -1.6
CCDC149-204ENST00000504487 FBN3Q75N90 2809 aa5.08□□□□□ -1.6
CCDC149-204ENST00000504487 Q8N1X5 172 aa5.06□□□□□ -1.6
CCDC149-204ENST00000504487 TYMSOSQ8TAI1 123 aa5.05□□□□□ -1.6
CCDC149-204ENST00000504487 SSBP3-AS1Q7Z2R9 100 aa5.04□□□□□ -1.6
CCDC149-204ENST00000504487 LINC00483Q53H64 154 aa5.04□□□□□ -1.6
CCDC149-204ENST00000504487 KRTAP13-1Q8IUC0 172 aa5.03□□□□□ -1.6
CCDC149-204ENST00000504487 IGLV7-43P04211 117 aa5.03□□□□□ -1.6
CCDC149-204ENST00000504487 CRIPTQ9P021 101 aa5.01□□□□□ -1.61
CCDC149-204ENST00000504487 KRTAP10-1P60331 282 aa5□□□□□ -1.61
CCDC149-204ENST00000504487 SPINT4Q6UDR6 99 aa4.98□□□□□ -1.61
CCDC149-204ENST00000504487 A0A1B0GU33 70 aa4.97□□□□□ -1.61
CCDC149-204ENST00000504487 MEGF8Q7Z7M0 2845 aa4.96□□□□□ -1.61
CCDC149-204ENST00000504487 C9orf92A6NGG3 77 aa4.96□□□□□ -1.62
CCDC149-204ENST00000504487 Q6ZRN7 208 aaPredicted RBP4.96□□□□□ -1.62
CCDC149-204ENST00000504487 KRTAP25-1Q3LHN0 102 aa4.93□□□□□ -1.62
CCDC149-204ENST00000504487 KRTAP13-3Q3SY46 172 aa4.92□□□□□ -1.62
CCDC149-204ENST00000504487 ROMO1P60602 79 aa4.91□□□□□ -1.62
CCDC149-204ENST00000504487 LINC00304Q8N9R0 145 aa4.91□□□□□ -1.62
CCDC149-204ENST00000504487 ANK2Q01484 3957 aa4.89□□□□□ -1.63
CCDC149-204ENST00000504487 DNHD1Q96M86 4753 aa4.88□□□□□ -1.63
CCDC149-204ENST00000504487 A0A0D9SG42 100 aa4.86□□□□□ -1.63
CCDC149-204ENST00000504487 Q6ZSA8 131 aa4.85□□□□□ -1.63
CCDC149-204ENST00000504487 J3QL48 77 aa4.85□□□□□ -1.63
CCDC149-204ENST00000504487 H1FX-AS1Q4G0G2 97 aa4.84□□□□□ -1.63
CCDC149-204ENST00000504487 A8MUU9 505 aa4.84□□□□□ -1.63
CCDC149-204ENST00000504487 H0YAA0 97 aa4.82□□□□□ -1.64
CCDC149-204ENST00000504487 CMYA5Q8N3K9 4069 aa4.82□□□□□ -1.64
CCDC149-204ENST00000504487 KRTAP13-2Q52LG2 175 aa4.8□□□□□ -1.64
CCDC149-204ENST00000504487 Q5VSD8 79 aa4.8□□□□□ -1.64
CCDC149-204ENST00000504487 KRTAP21-3Q3LHN1 58 aa4.78□□□□□ -1.64
CCDC149-204ENST00000504487 HUWE1Q7Z6Z7 4374 aaKnown RBP4.77□□□□□ -1.65
CCDC149-204ENST00000504487 KRTAP16-1A8MUX0 517 aa4.76□□□□□ -1.65
CCDC149-204ENST00000504487 RPL37P61927 97 aaKnown RBP4.75□□□□□ -1.65
CCDC149-204ENST00000504487 NDUFAF8A1L188 74 aa4.73□□□□□ -1.65
CCDC149-204ENST00000504487 COX6B2Q6YFQ2 88 aa4.72□□□□□ -1.65
CCDC149-204ENST00000504487 LYSTQ99698 3801 aa4.71□□□□□ -1.66
CCDC149-204ENST00000504487 LCE2DQ5TA82 110 aaPredicted RBP4.69□□□□□ -1.66
CCDC149-204ENST00000504487 DNAH3Q8TD57 4116 aa4.68□□□□□ -1.66
CCDC149-204ENST00000504487 DNAH10Q8IVF4 4471 aa4.67□□□□□ -1.66
CCDC149-204ENST00000504487 DNAH9Q9NYC9 4486 aa4.67□□□□□ -1.66
CCDC149-204ENST00000504487 PRKDCP78527 4128 aaKnown RBP4.66□□□□□ -1.66
CCDC149-204ENST00000504487 PLECQ15149 4684 aaKnown RBP4.66□□□□□ -1.66
CCDC149-204ENST00000504487 C10orf95Q9H7T3 257 aa4.65□□□□□ -1.66
CCDC149-204ENST00000504487 P0C880 135 aa4.65□□□□□ -1.67
CCDC149-204ENST00000504487 KRTAP1-4P0C5Y4 121 aa4.62□□□□□ -1.67
CCDC149-204ENST00000504487 C20orf166-AS1Q96NR2 134 aa4.62□□□□□ -1.67
CCDC149-204ENST00000504487 KRTAP3-3Q9BYR6 98 aa4.6□□□□□ -1.67
CCDC149-204ENST00000504487 KRTAP3-2Q9BYR7 98 aa4.6□□□□□ -1.67
CCDC149-204ENST00000504487 DNAH7Q8WXX0 4024 aa4.59□□□□□ -1.67
CCDC149-204ENST00000504487 STARD9Q9P2P6 4700 aa4.58□□□□□ -1.68
CCDC149-204ENST00000504487 S4R3F8 94 aa4.56□□□□□ -1.68
CCDC149-204ENST00000504487 KRTAP3-1Q9BYR8 98 aa4.56□□□□□ -1.68
CCDC149-204ENST00000504487 DNAH1Q9P2D7 4330 aa4.55□□□□□ -1.68
CCDC149-204ENST00000504487 TPRXLQ17RH7 258 aa4.55□□□□□ -1.68
CCDC149-204ENST00000504487 DNAH11Q96DT5 4516 aa4.54□□□□□ -1.68
CCDC149-204ENST00000504487 ALMS1Q8TCU4 4167 aa4.53□□□□□ -1.68
CCDC149-204ENST00000504487 RPS29P62273 56 aaKnown RBP4.52□□□□□ -1.69
CCDC149-204ENST00000504487 KMT2AQ03164 3969 aa4.51□□□□□ -1.69
CCDC149-204ENST00000504487 A0A1B0GVY2 172 aa4.49□□□□□ -1.69
CCDC149-204ENST00000504487 A0A0A0MQY5 61 aa4.47□□□□□ -1.69
CCDC149-204ENST00000504487 LUZP6Q538Z0 58 aa4.46□□□□□ -1.69
CCDC149-204ENST00000504487 FAT1Q14517 4588 aa4.46□□□□□ -1.7
CCDC149-204ENST00000504487 DNAH5Q8TE73 4624 aa4.46□□□□□ -1.7
CCDC149-204ENST00000504487 KRTAP13-4Q3LI77 160 aa4.46□□□□□ -1.7
CCDC149-204ENST00000504487 DNAH8Q96JB1 4490 aa4.45□□□□□ -1.7
CCDC149-204ENST00000504487 M0R2T5 61 aa4.42□□□□□ -1.7
CCDC149-204ENST00000504487 KRTAP10-6P60371 365 aaPredicted RBP4.42□□□□□ -1.7
CCDC149-204ENST00000504487 DYNC2H1Q8NCM8 4307 aaKnown RBP4.41□□□□□ -1.7
CCDC149-204ENST00000504487 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 184.5 ms