RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 TTTY10Q9BZA0 68 aa0.39□□□□□ -2.35
COPS4-203ENST00000504274 SACSQ9NZJ4 4579 aa0.39□□□□□ -2.35
COPS4-203ENST00000504274 NSD1Q96L73 2696 aaPredicted RBP0.39□□□□□ -2.35
COPS4-203ENST00000504274 WNK1Q9H4A3 2382 aa0.38□□□□□ -2.35
COPS4-203ENST00000504274 DUOX1Q9NRD9 1551 aa0.38□□□□□ -2.35
COPS4-203ENST00000504274 H3BSH0 61 aa0.38□□□□□ -2.35
COPS4-203ENST00000504274 WFDC10BQ8IUB3 73 aa0.38□□□□□ -2.35
COPS4-203ENST00000504274 SMIM2Q9BVW6 85 aa0.38□□□□□ -2.35
COPS4-203ENST00000504274 A0A0C4DFX4 3053 aa0.38□□□□□ -2.35
COPS4-203ENST00000504274 MDN1Q9NU22 5596 aa0.38□□□□□ -2.35
COPS4-203ENST00000504274 MAP1BP46821 2468 aaKnown RBP0.37□□□□□ -2.35
COPS4-203ENST00000504274 PKD1L2Q7Z442 2459 aa0.37□□□□□ -2.35
COPS4-203ENST00000504274 ARHGAP5-AS1Q96IT6 56 aa0.37□□□□□ -2.35
COPS4-203ENST00000504274 HMCN2Q8NDA2 5059 aa0.37□□□□□ -2.35
COPS4-203ENST00000504274 NCOR2Q9Y618 2525 aa0.37□□□□□ -2.35
COPS4-203ENST00000504274 STAB1Q9NY15 2570 aa0.37□□□□□ -2.35
COPS4-203ENST00000504274 COL7A1Q02388 2944 aa0.37□□□□□ -2.35
COPS4-203ENST00000504274 GPR98Q8WXG9 6306 aa0.35□□□□□ -2.35
COPS4-203ENST00000504274 PTPN13Q12923 2485 aa0.35□□□□□ -2.35
COPS4-203ENST00000504274 IGLV5-48A0A075B6I7 105 aa0.35□□□□□ -2.35
COPS4-203ENST00000504274 MMP24-AS1A0A0U1RRL7 71 aa0.35□□□□□ -2.35
COPS4-203ENST00000504274 LINC01590Q5TEZ4 76 aa0.35□□□□□ -2.35
COPS4-203ENST00000504274 HSPG2P98160 4391 aa0.34□□□□□ -2.35
COPS4-203ENST00000504274 H3BUA1 57 aa0.34□□□□□ -2.36
COPS4-203ENST00000504274 STATHP02808 62 aa0.34□□□□□ -2.36
COPS4-203ENST00000504274 PRCDQ00LT1 54 aa0.34□□□□□ -2.36
COPS4-203ENST00000504274 LEAP2Q969E1 77 aa0.34□□□□□ -2.36
COPS4-203ENST00000504274 ZZEF1O43149 2961 aa0.34□□□□□ -2.36
COPS4-203ENST00000504274 CREBBPQ92793 2442 aa0.34□□□□□ -2.36
COPS4-203ENST00000504274 DNAH11Q96DT5 4516 aa0.34□□□□□ -2.36
COPS4-203ENST00000504274 HECTD4Q9Y4D8 3996 aa0.33□□□□□ -2.36
COPS4-203ENST00000504274 FLNCQ14315 2725 aa0.33□□□□□ -2.36
COPS4-203ENST00000504274 CUBNO60494 3623 aa0.33□□□□□ -2.36
COPS4-203ENST00000504274 DEFB108AA8MXU0 73 aa0.33□□□□□ -2.36
COPS4-203ENST00000504274 NDUFA1O15239 70 aa0.33□□□□□ -2.36
COPS4-203ENST00000504274 RPL39P62891 51 aaKnown RBP0.33□□□□□ -2.36
COPS4-203ENST00000504274 RPL39P5Q59GN2 51 aa0.33□□□□□ -2.36
COPS4-203ENST00000504274 RPL39LQ96EH5 51 aaKnown RBP0.33□□□□□ -2.36
COPS4-203ENST00000504274 TOMM7Q9P0U1 55 aa0.33□□□□□ -2.36
COPS4-203ENST00000504274 PKHD1L1Q86WI1 4243 aa0.33□□□□□ -2.36
COPS4-203ENST00000504274 APC2O95996 2303 aa0.32□□□□□ -2.36
COPS4-203ENST00000504274 SRRM2Q9UQ35 2752 aaKnown RBP0.32□□□□□ -2.36
COPS4-203ENST00000504274 MUC5ACP98088 5654 aa0.32□□□□□ -2.36
COPS4-203ENST00000504274 NF1P21359 2839 aa0.32□□□□□ -2.36
COPS4-203ENST00000504274 H0YGG7 62 aa0.32□□□□□ -2.36
COPS4-203ENST00000504274 APELAP0DMC3 54 aa0.32□□□□□ -2.36
COPS4-203ENST00000504274 SPRR2BP35325 72 aa0.32□□□□□ -2.36
COPS4-203ENST00000504274 POLR2KP53803 58 aaKnown RBP0.32□□□□□ -2.36
COPS4-203ENST00000504274 TMEM167AQ8TBQ9 72 aa0.32□□□□□ -2.36
COPS4-203ENST00000504274 DEFB104AQ8WTQ1 72 aa0.32□□□□□ -2.36
COPS4-203ENST00000504274 DNAH3Q8TD57 4116 aa0.32□□□□□ -2.36
COPS4-203ENST00000504274 K7EIM0 57 aa0.31□□□□□ -2.36
COPS4-203ENST00000504274 M0QY20 66 aa0.31□□□□□ -2.36
COPS4-203ENST00000504274 DEFB110Q30KQ9 67 aa0.31□□□□□ -2.36
COPS4-203ENST00000504274 DEFB108BQ8NET1 73 aa0.31□□□□□ -2.36
COPS4-203ENST00000504274 COX14Q96I36 57 aa0.31□□□□□ -2.36
COPS4-203ENST00000504274 GCN1Q92616 2671 aaKnown RBP0.31□□□□□ -2.36
COPS4-203ENST00000504274 A8MTW9 85 aa0.3□□□□□ -2.36
COPS4-203ENST00000504274 KMT2DO14686 5537 aa0.3□□□□□ -2.36
COPS4-203ENST00000504274 HTN1P15515 57 aa0.3□□□□□ -2.36
COPS4-203ENST00000504274 CD52P31358 61 aa0.3□□□□□ -2.36
COPS4-203ENST00000504274 KRTAP6-2Q3LI66 62 aa0.3□□□□□ -2.36
COPS4-203ENST00000504274 WDR87Q6ZQQ6 2873 aa0.3□□□□□ -2.36
COPS4-203ENST00000504274 FLNBO75369 2602 aaKnown RBP0.3□□□□□ -2.36
COPS4-203ENST00000504274 DMDP11532 3685 aa0.29□□□□□ -2.36
COPS4-203ENST00000504274 MAST4O15021 2626 aa0.29□□□□□ -2.36
COPS4-203ENST00000504274 PKHD1P08F94 4074 aa0.29□□□□□ -2.36
COPS4-203ENST00000504274 DMXL1Q9Y485 3027 aa0.29□□□□□ -2.36
COPS4-203ENST00000504274 DEFB131AP59861 70 aa0.29□□□□□ -2.36
COPS4-203ENST00000504274 DEFB1P60022 68 aa0.29□□□□□ -2.36
COPS4-203ENST00000504274 RHPN1-AS1Q9BWJ2 59 aa0.29□□□□□ -2.36
COPS4-203ENST00000504274 TACC2O95359 2948 aa0.29□□□□□ -2.36
COPS4-203ENST00000504274 IGSF10Q6WRI0 2623 aa0.29□□□□□ -2.36
COPS4-203ENST00000504274 LRP1BQ9NZR2 4599 aa0.28□□□□□ -2.36
COPS4-203ENST00000504274 DCHS2Q6V1P9 2916 aa0.28□□□□□ -2.36
COPS4-203ENST00000504274 ANK3Q12955 4377 aaKnown RBP0.28□□□□□ -2.36
COPS4-203ENST00000504274 ITPR3Q14573 2671 aa0.28□□□□□ -2.36
COPS4-203ENST00000504274 TENM2Q9NT68 2774 aa0.28□□□□□ -2.36
COPS4-203ENST00000504274 DEFB136Q30KP8 78 aa0.28□□□□□ -2.36
COPS4-203ENST00000504274 DEFB133Q30KQ1 61 aa0.28□□□□□ -2.36
COPS4-203ENST00000504274 CLPSL2Q6UWE3 100 aa0.28□□□□□ -2.36
COPS4-203ENST00000504274 NOP10Q9NPE3 64 aaKnown RBP0.28□□□□□ -2.36
COPS4-203ENST00000504274 Q9Y3F1 56 aa0.28□□□□□ -2.36
COPS4-203ENST00000504274 SPENQ96T58 3664 aaKnown RBP0.28□□□□□ -2.37
COPS4-203ENST00000504274 SPTBN5Q9NRC6 3674 aaKnown RBP0.28□□□□□ -2.37
COPS4-203ENST00000504274 SETD2Q9BYW2 2564 aaPredicted RBP0.28□□□□□ -2.37
COPS4-203ENST00000504274 SVEP1Q4LDE5 3571 aa0.27□□□□□ -2.37
COPS4-203ENST00000504274 KALRNO60229 2985 aa0.27□□□□□ -2.37
COPS4-203ENST00000504274 CHD7Q9P2D1 2997 aa0.27□□□□□ -2.37
COPS4-203ENST00000504274 SPTBN4Q9H254 2564 aa0.27□□□□□ -2.37
COPS4-203ENST00000504274 MAP1AP78559 2803 aaPredicted RBP0.27□□□□□ -2.37
COPS4-203ENST00000504274 NBEAQ8NFP9 2946 aa0.27□□□□□ -2.37
COPS4-203ENST00000504274 NBPF19A0A087WUL8 3843 aa0.27□□□□□ -2.37
COPS4-203ENST00000504274 A0A096LNI7 61 aa0.27□□□□□ -2.37
COPS4-203ENST00000504274 A0A096LPF7 62 aa0.27□□□□□ -2.37
COPS4-203ENST00000504274 H3BUX3 64 aa0.27□□□□□ -2.37
COPS4-203ENST00000504274 ZFHX4Q86UP3 3567 aa0.26□□□□□ -2.37
COPS4-203ENST00000504274 FLGP20930 4061 aaPredicted RBP0.26□□□□□ -2.37
COPS4-203ENST00000504274 DNAH2Q9P225 4427 aa0.26□□□□□ -2.37
COPS4-203ENST00000504274 NIPBLQ6KC79 2804 aaeCLIP0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms