RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 TRBV10-3A0A0K0K1G6 114 aa1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 H3BNG1 76 aa1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 H7BZZ5 65 aa1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 IGKV2D-40P01614 121 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 NDUFA12Q9UI09 145 aa1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 FAT3Q8TDW7 4589 aa1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 PKHD1L1Q86WI1 4243 aa1.93□□□□□ -2.1
HMGB1P3-201ENST00000502802 FXYD6-FXYD2A0A087WZ82 144 aa1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 M0R3E3 92 aa1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 ERC2-IT1O76042 136 aa1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 COX6CP09669 75 aa1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 CNBPP62633 177 aaKnown RBP1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 C9orf116Q5BN46 136 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 C10orf113Q5VZT2 155 aa1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 C2orf82Q6UX34 121 aa1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 Q8N814 137 aa1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 MANBALQ9NQG1 85 aa1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 PRO1854Q9UHT4 67 aa1.92□□□□□ -2.1
HMGB1P3-201ENST00000502802 TRGV1A0A0A0MS02 117 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 SPINK4O60575 86 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 C3orf79P0CE67 100 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 UBE2D3P61077 147 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 UBE2D2P62837 147 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 ATP5EP2Q5VTU8 51 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 LYPD5Q6UWN5 251 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 CASC2Q6XLA1 102 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 IFI27L1Q96BM0 104 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 LIMD2Q9BT23 127 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 CDC42SE1Q9NRR8 79 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 TMEM14CQ9P0S9 112 aa1.91□□□□□ -2.1
HMGB1P3-201ENST00000502802 TRBV25-1A0A075B6N4 114 aa1.9□□□□□ -2.11
HMGB1P3-201ENST00000502802 ZNF56Q15929 161 aa1.9□□□□□ -2.11
HMGB1P3-201ENST00000502802 BAGE3Q86Y29 109 aa1.9□□□□□ -2.11
HMGB1P3-201ENST00000502802 BAGE2Q86Y30 109 aa1.9□□□□□ -2.11
HMGB1P3-201ENST00000502802 WFDC10BQ8IUB3 73 aa1.9□□□□□ -2.11
HMGB1P3-201ENST00000502802 Q8TAT8 98 aa1.9□□□□□ -2.11
HMGB1P3-201ENST00000502802 PRO0255Q9UI72 69 aa1.9□□□□□ -2.11
HMGB1P3-201ENST00000502802 TRAV23DV6A0A075B6W5 121 aa1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 A0A087WTM6 91 aa1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 LOC107984156A0A0G2JMH3 177 aa1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 HCG22E2RYF7 251 aa1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 SMR3BP02814 79 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 GCHFRP30047 84 aa1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 Q5VSD8 79 aa1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 ARL17AQ8IVW1 177 aa1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 FAM19A2Q8N3H0 131 aa1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 LINC00474Q9P2X8 69 aa1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 C22orf24Q9Y442 160 aa1.89□□□□□ -2.11
HMGB1P3-201ENST00000502802 LOC110117498A0A087WWA1 95 aa1.88□□□□□ -2.11
HMGB1P3-201ENST00000502802 MYMXA0A1B0GTQ4 84 aa1.88□□□□□ -2.11
HMGB1P3-201ENST00000502802 HAMPP81172 84 aa1.88□□□□□ -2.11
HMGB1P3-201ENST00000502802 S100A7L2Q5SY68 101 aa1.88□□□□□ -2.11
HMGB1P3-201ENST00000502802 Q6JHZ5 121 aa1.88□□□□□ -2.11
HMGB1P3-201ENST00000502802 NMES1Q9C002 83 aa1.88□□□□□ -2.11
HMGB1P3-201ENST00000502802 LENEPQ9Y5L5 61 aa1.88□□□□□ -2.11
HMGB1P3-201ENST00000502802 IFI27P40305 119 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P3-201ENST00000502802 LINC01556Q5JQF7 62 aa1.87□□□□□ -2.11
HMGB1P3-201ENST00000502802 PPP1R1CQ8WVI7 109 aa1.87□□□□□ -2.11
HMGB1P3-201ENST00000502802 TRAV22A0A0B4J277 110 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 TRAV21A0A0B4J279 112 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 LOC101927531A0A1B0GV80 90 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 TRBV6-4A0A1B0GX49 114 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 IGHV3-30P01768 117 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 IGHV3-33P01772 117 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 ARL14EPLP0DKL9 152 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 IGHV3-30-5P0DP03 117 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 LELP1Q5T871 98 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 Q6ZSA8 131 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 ARL2-SNX15V9GYD0 113 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 HMCN2Q8NDA2 5059 aa1.86□□□□□ -2.11
HMGB1P3-201ENST00000502802 UBR4Q5T4S7 5183 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 ZNF815PA8K554 130 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 INE1O15225 51 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 ELOF1P60002 83 aaKnown RBP1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 KRTAP10-4P60372 401 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 ATXN8Q156A1 80 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 KRTAP26-1Q6PEX3 210 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 Q86TA4 180 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 SPTSSBQ8NFR3 76 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 AMELXQ99217 191 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 ORMDL1Q9P0S3 153 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 TNXBP22105 4242 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 LRP2P98164 4655 aa1.85□□□□□ -2.11
HMGB1P3-201ENST00000502802 HIGD1CA8MV81 97 aa1.84□□□□□ -2.11
HMGB1P3-201ENST00000502802 CRIP1P50238 77 aa1.84□□□□□ -2.11
HMGB1P3-201ENST00000502802 C20orf197Q8N268 126 aa1.84□□□□□ -2.11
HMGB1P3-201ENST00000502802 CDC42SE2Q9NRR3 84 aa1.84□□□□□ -2.11
HMGB1P3-201ENST00000502802 GNG13Q9P2W3 67 aa1.84□□□□□ -2.11
HMGB1P3-201ENST00000502802 TRBV10-1A0A0K0K1A3 114 aa1.83□□□□□ -2.12
HMGB1P3-201ENST00000502802 CHKB-CPT1BH3BT56 60 aa1.83□□□□□ -2.12
HMGB1P3-201ENST00000502802 H3BVH4 76 aa1.83□□□□□ -2.12
HMGB1P3-201ENST00000502802 ARMS2P0C7Q2 107 aa1.83□□□□□ -2.12
HMGB1P3-201ENST00000502802 SERF2P84101 59 aa1.83□□□□□ -2.12
HMGB1P3-201ENST00000502802 MIR22HGQ0VDD5 57 aa1.83□□□□□ -2.12
HMGB1P3-201ENST00000502802 Q5VV11 94 aa1.83□□□□□ -2.12
HMGB1P3-201ENST00000502802 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
HMGB1P3-201ENST00000502802 DEFB104AQ8WTQ1 72 aa1.83□□□□□ -2.12
HMGB1P3-201ENST00000502802 TMEM167BQ9NRX6 74 aa1.83□□□□□ -2.12
HMGB1P3-201ENST00000502802 UBE2D4Q9Y2X8 147 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms