RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 LINC01558Q9Y6Z2 57 aa4.51□□□□□ -1.69
PDGFC-203ENST00000502773 MRPL34Q9BQ48 92 aaKnown RBP4.5□□□□□ -1.69
PDGFC-203ENST00000502773 KRTAP16-1A8MUX0 517 aa4.49□□□□□ -1.69
PDGFC-203ENST00000502773 CIRBP-AS1Q8TBR5 109 aa4.49□□□□□ -1.69
PDGFC-203ENST00000502773 A0A0G2JQZ4 141 aa4.49□□□□□ -1.69
PDGFC-203ENST00000502773 KRTAP29-1A8MX34 341 aaPredicted RBP4.49□□□□□ -1.69
PDGFC-203ENST00000502773 TENM1Q9UKZ4 2725 aa4.48□□□□□ -1.69
PDGFC-203ENST00000502773 MGAM2Q2M2H8 2515 aa4.48□□□□□ -1.69
PDGFC-203ENST00000502773 CRIPTQ9P021 101 aa4.48□□□□□ -1.69
PDGFC-203ENST00000502773 BAHCC1Q9P281 2608 aa4.48□□□□□ -1.69
PDGFC-203ENST00000502773 ZCCHC13Q8WW36 166 aaKnown RBP4.47□□□□□ -1.69
PDGFC-203ENST00000502773 MMP24-AS1A0A0U1RRL7 71 aa4.46□□□□□ -1.7
PDGFC-203ENST00000502773 ZNF469Q96JG9 3925 aaPredicted RBP4.46□□□□□ -1.7
PDGFC-203ENST00000502773 FAM229AH3BQW9 127 aa4.46□□□□□ -1.7
PDGFC-203ENST00000502773 PLA2G1BP04054 148 aaKnown RBP4.46□□□□□ -1.7
PDGFC-203ENST00000502773 VWFP04275 2813 aa4.45□□□□□ -1.7
PDGFC-203ENST00000502773 NOTCH1P46531 2555 aa4.45□□□□□ -1.7
PDGFC-203ENST00000502773 IGLV7-46A0A075B6I9 117 aa4.44□□□□□ -1.7
PDGFC-203ENST00000502773 KRTAP11-1Q8IUC1 163 aa4.44□□□□□ -1.7
PDGFC-203ENST00000502773 PANO1I0J062 215 aa4.44□□□□□ -1.7
PDGFC-203ENST00000502773 NBPF19A0A087WUL8 3843 aa4.43□□□□□ -1.7
PDGFC-203ENST00000502773 RPS29P62273 56 aaKnown RBP4.43□□□□□ -1.7
PDGFC-203ENST00000502773 Q6ZSA8 131 aa4.41□□□□□ -1.7
PDGFC-203ENST00000502773 TYMSOSQ8TAI1 123 aa4.41□□□□□ -1.7
PDGFC-203ENST00000502773 LUZP6Q538Z0 58 aa4.41□□□□□ -1.7
PDGFC-203ENST00000502773 ROMO1P60602 79 aa4.41□□□□□ -1.7
PDGFC-203ENST00000502773 IGKV2D-30A0A075B6S6 120 aa4.4□□□□□ -1.71
PDGFC-203ENST00000502773 IGKV2-30P06310 120 aa4.4□□□□□ -1.71
PDGFC-203ENST00000502773 NDUFAF8A1L188 74 aa4.39□□□□□ -1.71
PDGFC-203ENST00000502773 J3QL48 77 aa4.39□□□□□ -1.71
PDGFC-203ENST00000502773 HRES1P13985 223 aa4.39□□□□□ -1.71
PDGFC-203ENST00000502773 TENM3Q9P273 2699 aa4.39□□□□□ -1.71
PDGFC-203ENST00000502773 Q96NJ1 140 aa4.39□□□□□ -1.71
PDGFC-203ENST00000502773 NBEAL1Q6ZS30 2694 aa4.38□□□□□ -1.71
PDGFC-203ENST00000502773 FBN1P35555 2871 aaKnown RBP4.36□□□□□ -1.71
PDGFC-203ENST00000502773 LINC00304Q8N9R0 145 aa4.36□□□□□ -1.71
PDGFC-203ENST00000502773 KRTAP10-2P60368 255 aa4.35□□□□□ -1.71
PDGFC-203ENST00000502773 KRTAP10-1P60331 282 aa4.35□□□□□ -1.71
PDGFC-203ENST00000502773 ANAPC11Q9NYG5 84 aa4.34□□□□□ -1.71
PDGFC-203ENST00000502773 STAB2Q8WWQ8 2551 aa4.34□□□□□ -1.71
PDGFC-203ENST00000502773 DNAH3Q8TD57 4116 aa4.33□□□□□ -1.72
PDGFC-203ENST00000502773 DMAC1Q96GE9 116 aa4.32□□□□□ -1.72
PDGFC-203ENST00000502773 HUWE1Q7Z6Z7 4374 aaKnown RBP4.31□□□□□ -1.72
PDGFC-203ENST00000502773 KRTAP25-1Q3LHN0 102 aa4.3□□□□□ -1.72
PDGFC-203ENST00000502773 TRRAPQ9Y4A5 3859 aa4.3□□□□□ -1.72
PDGFC-203ENST00000502773 SPATA8Q6RVD6 105 aa4.28□□□□□ -1.72
PDGFC-203ENST00000502773 KRTAP13-2Q52LG2 175 aa4.27□□□□□ -1.73
PDGFC-203ENST00000502773 A0A087X002 238 aa4.26□□□□□ -1.73
PDGFC-203ENST00000502773 Q5W150 140 aa4.25□□□□□ -1.73
PDGFC-203ENST00000502773 PKD1L1Q8TDX9 2849 aa4.25□□□□□ -1.73
PDGFC-203ENST00000502773 KRTAP1-4P0C5Y4 121 aa4.24□□□□□ -1.73
PDGFC-203ENST00000502773 C20orf166-AS1Q96NR2 134 aa4.23□□□□□ -1.73
PDGFC-203ENST00000502773 DNAH9Q9NYC9 4486 aa4.23□□□□□ -1.73
PDGFC-203ENST00000502773 LCE2BO14633 110 aa4.23□□□□□ -1.73
PDGFC-203ENST00000502773 A0A0D9SG42 100 aa4.22□□□□□ -1.73
PDGFC-203ENST00000502773 A8MUU9 505 aa4.22□□□□□ -1.73
PDGFC-203ENST00000502773 ANK2Q01484 3957 aa4.22□□□□□ -1.73
PDGFC-203ENST00000502773 DYNC2H1Q8NCM8 4307 aaKnown RBP4.21□□□□□ -1.74
PDGFC-203ENST00000502773 CMYA5Q8N3K9 4069 aa4.21□□□□□ -1.74
PDGFC-203ENST00000502773 A0A1B0GU33 70 aa4.21□□□□□ -1.74
PDGFC-203ENST00000502773 NOTCH2NLQ7Z3S9 236 aa4.2□□□□□ -1.74
PDGFC-203ENST00000502773 Q8N1X5 172 aa4.19□□□□□ -1.74
PDGFC-203ENST00000502773 KRTAP13-3Q3SY46 172 aa4.18□□□□□ -1.74
PDGFC-203ENST00000502773 SEC61BP60468 96 aaKnown RBP4.17□□□□□ -1.74
PDGFC-203ENST00000502773 SMR3BP02814 79 aaPredicted RBP4.17□□□□□ -1.74
PDGFC-203ENST00000502773 A0A1B0GVY2 172 aa4.16□□□□□ -1.74
PDGFC-203ENST00000502773 DNAH1Q9P2D7 4330 aa4.15□□□□□ -1.74
PDGFC-203ENST00000502773 VPS13DQ5THJ4 4388 aa4.15□□□□□ -1.74
PDGFC-203ENST00000502773 ALMS1Q8TCU4 4167 aa4.13□□□□□ -1.75
PDGFC-203ENST00000502773 SRRM2Q9UQ35 2752 aaKnown RBP4.12□□□□□ -1.75
PDGFC-203ENST00000502773 DNAH6Q9C0G6 4158 aa4.11□□□□□ -1.75
PDGFC-203ENST00000502773 LCE2AQ5TA79 106 aaPredicted RBP4.08□□□□□ -1.76
PDGFC-203ENST00000502773 LCE2CQ5TA81 110 aa4.08□□□□□ -1.76
PDGFC-203ENST00000502773 Q5VSD8 79 aa4.08□□□□□ -1.76
PDGFC-203ENST00000502773 C9orf92A6NGG3 77 aa4.08□□□□□ -1.76
PDGFC-203ENST00000502773 DNAH17Q9UFH2 4485 aa4.07□□□□□ -1.76
PDGFC-203ENST00000502773 DNAH10Q8IVF4 4471 aa4.06□□□□□ -1.76
PDGFC-203ENST00000502773 PLECQ15149 4684 aaKnown RBP4.05□□□□□ -1.76
PDGFC-203ENST00000502773 COX6B2Q6YFQ2 88 aa4.05□□□□□ -1.76
PDGFC-203ENST00000502773 P0C880 135 aa4.05□□□□□ -1.76
PDGFC-203ENST00000502773 TENM2Q9NT68 2774 aa4.05□□□□□ -1.76
PDGFC-203ENST00000502773 RPL37P61927 97 aaKnown RBP4.03□□□□□ -1.76
PDGFC-203ENST00000502773 KRTAP10-8P60410 259 aa4.03□□□□□ -1.76
PDGFC-203ENST00000502773 COL7A1Q02388 2944 aa4.02□□□□□ -1.77
PDGFC-203ENST00000502773 CSMD3Q7Z407 3707 aa4.01□□□□□ -1.77
PDGFC-203ENST00000502773 TGP01266 2768 aa4.01□□□□□ -1.77
PDGFC-203ENST00000502773 H1FX-AS1Q4G0G2 97 aa4.01□□□□□ -1.77
PDGFC-203ENST00000502773 C10orf95Q9H7T3 257 aa4.01□□□□□ -1.77
PDGFC-203ENST00000502773 KRTAP10-4P60372 401 aaPredicted RBP4□□□□□ -1.77
PDGFC-203ENST00000502773 DNAH7Q8WXX0 4024 aa4□□□□□ -1.77
PDGFC-203ENST00000502773 MEGF8Q7Z7M0 2845 aa4□□□□□ -1.77
PDGFC-203ENST00000502773 LORP23490 312 aaPredicted RBP3.99□□□□□ -1.77
PDGFC-203ENST00000502773 FBN3Q75N90 2809 aa3.98□□□□□ -1.77
PDGFC-203ENST00000502773 DNAH2Q9P225 4427 aa3.98□□□□□ -1.77
PDGFC-203ENST00000502773 DNAH8Q96JB1 4490 aa3.97□□□□□ -1.77
PDGFC-203ENST00000502773 STARD9Q9P2P6 4700 aa3.96□□□□□ -1.77
PDGFC-203ENST00000502773 PRKDCP78527 4128 aaKnown RBP3.95□□□□□ -1.78
PDGFC-203ENST00000502773 CAMK2N1Q7Z7J9 78 aa3.95□□□□□ -1.78
PDGFC-203ENST00000502773 S4R3F8 94 aa3.94□□□□□ -1.78
PDGFC-203ENST00000502773 TPRXLQ17RH7 258 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms