RNA–Protein interactions for RNA: ENST00000502479.1

LINC00939-201, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best) BASIC

Gene LINC00939, Length 4,972 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-201ENST00000502479 COX6B2Q6YFQ2 88 aa3.93□□□□□ -1.78
LINC00939-201ENST00000502479 NSD1Q96L73 2696 aaPredicted RBP3.93□□□□□ -1.78
LINC00939-201ENST00000502479 IGLV7-46A0A075B6I9 117 aa3.93□□□□□ -1.78
LINC00939-201ENST00000502479 TYMSOSQ8TAI1 123 aa3.93□□□□□ -1.78
LINC00939-201ENST00000502479 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.92□□□□□ -1.78
LINC00939-201ENST00000502479 HELZ2Q9BYK8 2649 aaKnown RBP3.92□□□□□ -1.78
LINC00939-201ENST00000502479 OXTP01178 125 aa3.91□□□□□ -1.78
LINC00939-201ENST00000502479 A0A0D9SG42 100 aa3.9□□□□□ -1.79
LINC00939-201ENST00000502479 VPS13DQ5THJ4 4388 aa3.9□□□□□ -1.79
LINC00939-201ENST00000502479 HECTD4Q9Y4D8 3996 aa3.9□□□□□ -1.79
LINC00939-201ENST00000502479 HECTD1Q9ULT8 2610 aa3.89□□□□□ -1.79
LINC00939-201ENST00000502479 FP248Q71RG6 208 aaPredicted RBP3.89□□□□□ -1.79
LINC00939-201ENST00000502479 RBM12B-AS1Q9P1G2 102 aa3.89□□□□□ -1.79
LINC00939-201ENST00000502479 HIVEP1P15822 2718 aa3.88□□□□□ -1.79
LINC00939-201ENST00000502479 KRTAP21-3Q3LHN1 58 aa3.88□□□□□ -1.79
LINC00939-201ENST00000502479 FLNAP21333 2647 aaKnown RBP3.88□□□□□ -1.79
LINC00939-201ENST00000502479 RPS29P62273 56 aaKnown RBP3.87□□□□□ -1.79
LINC00939-201ENST00000502479 DNAH2Q9P225 4427 aa3.87□□□□□ -1.79
LINC00939-201ENST00000502479 COL7A1Q02388 2944 aa3.87□□□□□ -1.79
LINC00939-201ENST00000502479 KRTAP11-1Q8IUC1 163 aa3.86□□□□□ -1.79
LINC00939-201ENST00000502479 A0A0G2JQZ4 141 aa3.86□□□□□ -1.79
LINC00939-201ENST00000502479 DNHD1Q96M86 4753 aa3.86□□□□□ -1.79
LINC00939-201ENST00000502479 PKD1L1Q8TDX9 2849 aa3.86□□□□□ -1.79
LINC00939-201ENST00000502479 FLNBO75369 2602 aaKnown RBP3.86□□□□□ -1.79
LINC00939-201ENST00000502479 PLECQ15149 4684 aaKnown RBP3.85□□□□□ -1.79
LINC00939-201ENST00000502479 ALMS1Q8TCU4 4167 aa3.85□□□□□ -1.79
LINC00939-201ENST00000502479 DNAH10Q8IVF4 4471 aa3.85□□□□□ -1.79
LINC00939-201ENST00000502479 STARD9Q9P2P6 4700 aa3.85□□□□□ -1.79
LINC00939-201ENST00000502479 Q75L30 129 aa3.85□□□□□ -1.79
LINC00939-201ENST00000502479 CAMK2N1Q7Z7J9 78 aa3.85□□□□□ -1.79
LINC00939-201ENST00000502479 DMAC1Q96GE9 116 aa3.85□□□□□ -1.79
LINC00939-201ENST00000502479 BAHCC1Q9P281 2608 aa3.84□□□□□ -1.79
LINC00939-201ENST00000502479 DNAH17Q9UFH2 4485 aa3.84□□□□□ -1.8
LINC00939-201ENST00000502479 PANO1I0J062 215 aa3.83□□□□□ -1.8
LINC00939-201ENST00000502479 PKD1P98161 4303 aa3.83□□□□□ -1.8
LINC00939-201ENST00000502479 LINC01558Q9Y6Z2 57 aa3.83□□□□□ -1.8
LINC00939-201ENST00000502479 DNAH8Q96JB1 4490 aa3.81□□□□□ -1.8
LINC00939-201ENST00000502479 TEP1Q99973 2627 aaKnown RBP3.81□□□□□ -1.8
LINC00939-201ENST00000502479 J3QL48 77 aa3.81□□□□□ -1.8
LINC00939-201ENST00000502479 DNAH11Q96DT5 4516 aa3.81□□□□□ -1.8
LINC00939-201ENST00000502479 FAT2Q9NYQ8 4349 aa3.8□□□□□ -1.8
LINC00939-201ENST00000502479 A0A1B0GU33 70 aa3.8□□□□□ -1.8
LINC00939-201ENST00000502479 PRR26Q8N8Z3 221 aa3.8□□□□□ -1.8
LINC00939-201ENST00000502479 Q8N9P0 234 aaPredicted RBP3.79□□□□□ -1.8
LINC00939-201ENST00000502479 FBN3Q75N90 2809 aa3.79□□□□□ -1.8
LINC00939-201ENST00000502479 MAST4O15021 2626 aa3.79□□□□□ -1.8
LINC00939-201ENST00000502479 SPINK7P58062 85 aa3.79□□□□□ -1.8
LINC00939-201ENST00000502479 Q6ZSA8 131 aa3.79□□□□□ -1.8
LINC00939-201ENST00000502479 LINC00304Q8N9R0 145 aa3.79□□□□□ -1.8
LINC00939-201ENST00000502479 Q8N1X5 172 aa3.79□□□□□ -1.8
LINC00939-201ENST00000502479 KMT2AQ03164 3969 aa3.78□□□□□ -1.8
LINC00939-201ENST00000502479 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
LINC00939-201ENST00000502479 C9orf92A6NGG3 77 aa3.77□□□□□ -1.81
LINC00939-201ENST00000502479 Q5VV11 94 aa3.76□□□□□ -1.81
LINC00939-201ENST00000502479 KRTAP16-1A8MUX0 517 aa3.76□□□□□ -1.81
LINC00939-201ENST00000502479 Q5W150 140 aa3.76□□□□□ -1.81
LINC00939-201ENST00000502479 ANAPC11Q9NYG5 84 aa3.76□□□□□ -1.81
LINC00939-201ENST00000502479 HRES1P13985 223 aa3.75□□□□□ -1.81
LINC00939-201ENST00000502479 CSAG1Q6PB30 78 aa3.75□□□□□ -1.81
LINC00939-201ENST00000502479 DMBT1Q9UGM3 2413 aaPredicted RBP3.74□□□□□ -1.81
LINC00939-201ENST00000502479 KRTAP10-1P60331 282 aa3.73□□□□□ -1.81
LINC00939-201ENST00000502479 PKHD1P08F94 4074 aa3.73□□□□□ -1.81
LINC00939-201ENST00000502479 KRTAP10-2P60368 255 aa3.73□□□□□ -1.81
LINC00939-201ENST00000502479 PKHD1L1Q86WI1 4243 aa3.73□□□□□ -1.81
LINC00939-201ENST00000502479 DNAH5Q8TE73 4624 aa3.73□□□□□ -1.81
LINC00939-201ENST00000502479 A0A087X002 238 aa3.72□□□□□ -1.81
LINC00939-201ENST00000502479 HYDINQ4G0P3 5121 aa3.71□□□□□ -1.82
LINC00939-201ENST00000502479 KRTAP13-2Q52LG2 175 aa3.7□□□□□ -1.82
LINC00939-201ENST00000502479 KRTAP13-3Q3SY46 172 aa3.69□□□□□ -1.82
LINC00939-201ENST00000502479 MEGF8Q7Z7M0 2845 aa3.68□□□□□ -1.82
LINC00939-201ENST00000502479 ATRQ13535 2644 aa3.68□□□□□ -1.82
LINC00939-201ENST00000502479 TENM3Q9P273 2699 aa3.68□□□□□ -1.82
LINC00939-201ENST00000502479 H1FX-AS1Q4G0G2 97 aa3.67□□□□□ -1.82
LINC00939-201ENST00000502479 MGAM2Q2M2H8 2515 aa3.67□□□□□ -1.82
LINC00939-201ENST00000502479 KRTAP1-4P0C5Y4 121 aa3.67□□□□□ -1.82
LINC00939-201ENST00000502479 NOTCH2NLQ7Z3S9 236 aa3.66□□□□□ -1.82
LINC00939-201ENST00000502479 ROMO1P60602 79 aa3.66□□□□□ -1.82
LINC00939-201ENST00000502479 SACSQ9NZJ4 4579 aa3.66□□□□□ -1.82
LINC00939-201ENST00000502479 R4GN34 69 aa3.65□□□□□ -1.82
LINC00939-201ENST00000502479 RPL37P61927 97 aaKnown RBP3.65□□□□□ -1.82
LINC00939-201ENST00000502479 M0R2T5 61 aa3.65□□□□□ -1.83
LINC00939-201ENST00000502479 PLAC4Q8WY50 150 aa3.65□□□□□ -1.83
LINC00939-201ENST00000502479 STAB1Q9NY15 2570 aa3.63□□□□□ -1.83
LINC00939-201ENST00000502479 C20orf166-AS1Q96NR2 134 aa3.62□□□□□ -1.83
LINC00939-201ENST00000502479 STAB2Q8WWQ8 2551 aa3.62□□□□□ -1.83
LINC00939-201ENST00000502479 A8MUU9 505 aa3.62□□□□□ -1.83
LINC00939-201ENST00000502479 SMR3BP02814 79 aaPredicted RBP3.61□□□□□ -1.83
LINC00939-201ENST00000502479 VPS13BQ7Z7G8 4022 aa3.61□□□□□ -1.83
LINC00939-201ENST00000502479 SPATA8Q6RVD6 105 aa3.61□□□□□ -1.83
LINC00939-201ENST00000502479 S4R3F8 94 aa3.6□□□□□ -1.83
LINC00939-201ENST00000502479 LCE2DQ5TA82 110 aaPredicted RBP3.6□□□□□ -1.83
LINC00939-201ENST00000502479 NBEAL1Q6ZS30 2694 aa3.59□□□□□ -1.83
LINC00939-201ENST00000502479 A0A1B0GVY2 172 aa3.59□□□□□ -1.83
LINC00939-201ENST00000502479 A6NN06 94 aa3.59□□□□□ -1.83
LINC00939-201ENST00000502479 NBEAL2Q6ZNJ1 2754 aa3.57□□□□□ -1.84
LINC00939-201ENST00000502479 KRTAP3-3Q9BYR6 98 aa3.57□□□□□ -1.84
LINC00939-201ENST00000502479 KRTAP3-2Q9BYR7 98 aa3.57□□□□□ -1.84
LINC00939-201ENST00000502479 COL6A5A8TX70 2615 aa3.56□□□□□ -1.84
LINC00939-201ENST00000502479 RYR2Q92736 4967 aa3.56□□□□□ -1.84
LINC00939-201ENST00000502479 FAT3Q8TDW7 4589 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms