RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 RBM12B-AS1Q9P1G2 102 aa4.93□□□□□ -1.62
HLA-DMB-262ENST00000498020 SPINT4Q6UDR6 99 aa4.93□□□□□ -1.62
HLA-DMB-262ENST00000498020 H7BZZ5 65 aa4.92□□□□□ -1.62
HLA-DMB-262ENST00000498020 CRIPTQ9P021 101 aa4.92□□□□□ -1.62
HLA-DMB-262ENST00000498020 MIR22HGQ0VDD5 57 aa4.92□□□□□ -1.62
HLA-DMB-262ENST00000498020 OCR1Q9BZK8 76 aa4.92□□□□□ -1.62
HLA-DMB-262ENST00000498020 Q6ZRN7 208 aaPredicted RBP4.91□□□□□ -1.62
HLA-DMB-262ENST00000498020 Q6ZSA8 131 aa4.91□□□□□ -1.62
HLA-DMB-262ENST00000498020 Q6ZR54 194 aa4.9□□□□□ -1.62
HLA-DMB-262ENST00000498020 PLAC8Q9NZF1 115 aa4.89□□□□□ -1.63
HLA-DMB-262ENST00000498020 CYSTM1Q9H1C7 97 aa4.89□□□□□ -1.63
HLA-DMB-262ENST00000498020 SPANXA2-OT1Q8N9U9 137 aa4.88□□□□□ -1.63
HLA-DMB-262ENST00000498020 PANO1I0J062 215 aa4.87□□□□□ -1.63
HLA-DMB-262ENST00000498020 COL7A1Q02388 2944 aa4.87□□□□□ -1.63
HLA-DMB-262ENST00000498020 Q8N1X5 172 aa4.87□□□□□ -1.63
HLA-DMB-262ENST00000498020 CD164Q04900 197 aa4.87□□□□□ -1.63
HLA-DMB-262ENST00000498020 KRTAP11-1Q8IUC1 163 aa4.86□□□□□ -1.63
HLA-DMB-262ENST00000498020 DNHD1Q96M86 4753 aa4.86□□□□□ -1.63
HLA-DMB-262ENST00000498020 LINC01554Q52M75 96 aa4.84□□□□□ -1.63
HLA-DMB-262ENST00000498020 LINC00472Q9H8W2 130 aa4.84□□□□□ -1.63
HLA-DMB-262ENST00000498020 FAM229BQ4G0N7 80 aa4.82□□□□□ -1.64
HLA-DMB-262ENST00000498020 LINC00483Q53H64 154 aa4.82□□□□□ -1.64
HLA-DMB-262ENST00000498020 KRTAP13-1Q8IUC0 172 aa4.82□□□□□ -1.64
HLA-DMB-262ENST00000498020 CDC42SE1Q9NRR8 79 aa4.81□□□□□ -1.64
HLA-DMB-262ENST00000498020 A0A0D9SG42 100 aa4.8□□□□□ -1.64
HLA-DMB-262ENST00000498020 SEC61BP60468 96 aaKnown RBP4.79□□□□□ -1.64
HLA-DMB-262ENST00000498020 MEGF8Q7Z7M0 2845 aa4.79□□□□□ -1.64
HLA-DMB-262ENST00000498020 OXTP01178 125 aa4.79□□□□□ -1.64
HLA-DMB-262ENST00000498020 ANK2Q01484 3957 aa4.78□□□□□ -1.64
HLA-DMB-262ENST00000498020 MMP24-AS1A0A0U1RRL7 71 aa4.78□□□□□ -1.64
HLA-DMB-262ENST00000498020 KRTAP29-1A8MX34 341 aaPredicted RBP4.76□□□□□ -1.65
HLA-DMB-262ENST00000498020 KTN1-AS1Q86SY8 53 aa4.75□□□□□ -1.65
HLA-DMB-262ENST00000498020 LCA10Q71F78 164 aa4.75□□□□□ -1.65
HLA-DMB-262ENST00000498020 H3BS24 57 aa4.75□□□□□ -1.65
HLA-DMB-262ENST00000498020 HRES1P13985 223 aa4.74□□□□□ -1.65
HLA-DMB-262ENST00000498020 CAMK2N1Q7Z7J9 78 aa4.74□□□□□ -1.65
HLA-DMB-262ENST00000498020 A0A1B0GU33 70 aa4.73□□□□□ -1.65
HLA-DMB-262ENST00000498020 ZCCHC13Q8WW36 166 aaKnown RBP4.72□□□□□ -1.65
HLA-DMB-262ENST00000498020 Q1T7F1 81 aa4.72□□□□□ -1.65
HLA-DMB-262ENST00000498020 LUZP6Q538Z0 58 aa4.72□□□□□ -1.65
HLA-DMB-262ENST00000498020 CSAG1Q6PB30 78 aa4.71□□□□□ -1.66
HLA-DMB-262ENST00000498020 Q5XG85 94 aa4.69□□□□□ -1.66
HLA-DMB-262ENST00000498020 Q8N9P0 234 aaPredicted RBP4.68□□□□□ -1.66
HLA-DMB-262ENST00000498020 FP248Q71RG6 208 aaPredicted RBP4.67□□□□□ -1.66
HLA-DMB-262ENST00000498020 SPINK7P58062 85 aa4.66□□□□□ -1.66
HLA-DMB-262ENST00000498020 HUWE1Q7Z6Z7 4374 aaKnown RBP4.65□□□□□ -1.66
HLA-DMB-262ENST00000498020 ASB16-AS1Q495Z4 193 aa4.65□□□□□ -1.66
HLA-DMB-262ENST00000498020 Q75L30 129 aa4.65□□□□□ -1.67
HLA-DMB-262ENST00000498020 LINC01558Q9Y6Z2 57 aa4.65□□□□□ -1.67
HLA-DMB-262ENST00000498020 Q5W150 140 aa4.65□□□□□ -1.67
HLA-DMB-262ENST00000498020 DMAC1Q96GE9 116 aa4.65□□□□□ -1.67
HLA-DMB-262ENST00000498020 A0A087X002 238 aa4.64□□□□□ -1.67
HLA-DMB-262ENST00000498020 S4R3F8 94 aa4.63□□□□□ -1.67
HLA-DMB-262ENST00000498020 CMYA5Q8N3K9 4069 aa4.62□□□□□ -1.67
HLA-DMB-262ENST00000498020 R4GN34 69 aa4.62□□□□□ -1.67
HLA-DMB-262ENST00000498020 DNAH9Q9NYC9 4486 aa4.61□□□□□ -1.67
HLA-DMB-262ENST00000498020 NOTCH2NLQ7Z3S9 236 aa4.61□□□□□ -1.67
HLA-DMB-262ENST00000498020 PRKDCP78527 4128 aaKnown RBP4.61□□□□□ -1.67
HLA-DMB-262ENST00000498020 KRTAP13-2Q52LG2 175 aa4.6□□□□□ -1.67
HLA-DMB-262ENST00000498020 DNAH3Q8TD57 4116 aa4.56□□□□□ -1.68
HLA-DMB-262ENST00000498020 KRTAP1-4P0C5Y4 121 aa4.54□□□□□ -1.68
HLA-DMB-262ENST00000498020 RPL37P61927 97 aaKnown RBP4.53□□□□□ -1.68
HLA-DMB-262ENST00000498020 RPS29P62273 56 aaKnown RBP4.53□□□□□ -1.68
HLA-DMB-262ENST00000498020 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
HLA-DMB-262ENST00000498020 Q5VV11 94 aa4.53□□□□□ -1.68
HLA-DMB-262ENST00000498020 M0QZ58 72 aa4.5□□□□□ -1.69
HLA-DMB-262ENST00000498020 PRAC1Q96KF2 57 aa4.49□□□□□ -1.69
HLA-DMB-262ENST00000498020 H1FX-AS1Q4G0G2 97 aa4.46□□□□□ -1.7
HLA-DMB-262ENST00000498020 ROMO1P60602 79 aa4.45□□□□□ -1.7
HLA-DMB-262ENST00000498020 A0A1B0GVY2 172 aa4.45□□□□□ -1.7
HLA-DMB-262ENST00000498020 PLAC4Q8WY50 150 aa4.45□□□□□ -1.7
HLA-DMB-262ENST00000498020 C20orf166-AS1Q96NR2 134 aa4.43□□□□□ -1.7
HLA-DMB-262ENST00000498020 PLECQ15149 4684 aaKnown RBP4.42□□□□□ -1.7
HLA-DMB-262ENST00000498020 STARD9Q9P2P6 4700 aa4.42□□□□□ -1.7
HLA-DMB-262ENST00000498020 KRTAP16-1A8MUX0 517 aa4.42□□□□□ -1.7
HLA-DMB-262ENST00000498020 KRTAP13-3Q3SY46 172 aa4.41□□□□□ -1.7
HLA-DMB-262ENST00000498020 ADM2Q7Z4H4 148 aa4.41□□□□□ -1.7
HLA-DMB-262ENST00000498020 VPS13DQ5THJ4 4388 aa4.39□□□□□ -1.71
HLA-DMB-262ENST00000498020 DNAH10Q8IVF4 4471 aa4.38□□□□□ -1.71
HLA-DMB-262ENST00000498020 SPATA8Q6RVD6 105 aa4.38□□□□□ -1.71
HLA-DMB-262ENST00000498020 A8MUU9 505 aa4.37□□□□□ -1.71
HLA-DMB-262ENST00000498020 DNAH1Q9P2D7 4330 aa4.37□□□□□ -1.71
HLA-DMB-262ENST00000498020 KRTAP4-5Q9BYR2 181 aa4.36□□□□□ -1.71
HLA-DMB-262ENST00000498020 ALMS1Q8TCU4 4167 aa4.36□□□□□ -1.71
HLA-DMB-262ENST00000498020 CSMD3Q7Z407 3707 aa4.35□□□□□ -1.71
HLA-DMB-262ENST00000498020 DNAH7Q8WXX0 4024 aa4.34□□□□□ -1.71
HLA-DMB-262ENST00000498020 DNAH17Q9UFH2 4485 aa4.32□□□□□ -1.72
HLA-DMB-262ENST00000498020 DYNC2H1Q8NCM8 4307 aaKnown RBP4.32□□□□□ -1.72
HLA-DMB-262ENST00000498020 KMT2CQ8NEZ4 4911 aaKnown RBP4.3□□□□□ -1.72
HLA-DMB-262ENST00000498020 SACSQ9NZJ4 4579 aa4.29□□□□□ -1.72
HLA-DMB-262ENST00000498020 KMT2AQ03164 3969 aa4.29□□□□□ -1.72
HLA-DMB-262ENST00000498020 KRTAP10-10P60014 251 aa4.28□□□□□ -1.72
HLA-DMB-262ENST00000498020 RYR2Q92736 4967 aa4.27□□□□□ -1.73
HLA-DMB-262ENST00000498020 A8MU10 97 aa4.26□□□□□ -1.73
HLA-DMB-262ENST00000498020 KRTAP10-8P60410 259 aa4.26□□□□□ -1.73
HLA-DMB-262ENST00000498020 TPRXLQ17RH7 258 aa4.25□□□□□ -1.73
HLA-DMB-262ENST00000498020 XP32Q5T750 250 aa4.25□□□□□ -1.73
HLA-DMB-262ENST00000498020 KRTAP10-4P60372 401 aaPredicted RBP4.24□□□□□ -1.73
HLA-DMB-262ENST00000498020 HYDINQ4G0P3 5121 aa4.24□□□□□ -1.73
HLA-DMB-262ENST00000498020 LYSTQ99698 3801 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms