RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 SOSTDC1Q6X4U4 206 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 SPTSSBQ8NFR3 76 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 LINC00308Q8TCZ7 52 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 CCL19Q99731 98 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 RETNLBQ9BQ08 111 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 BPESC1Q9GZL8 116 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 PROK2Q9HC23 129 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 C14orf132Q9NPU4 83 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 SNURFQ9Y675 71 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 DSCAMO60469 2012 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 LECT2O14960 151 aa1.15□□□□□ -2.23
CBX3-208ENST00000497498 PSCAO43653 123 aa1.15□□□□□ -2.23
CBX3-208ENST00000497498 MRPL33O75394 65 aaKnown RBP1.15□□□□□ -2.23
CBX3-208ENST00000497498 STATHP02808 62 aa1.15□□□□□ -2.23
CBX3-208ENST00000497498 MGPP08493 103 aa1.15□□□□□ -2.23
CBX3-208ENST00000497498 CRIP1P50238 77 aa1.15□□□□□ -2.23
CBX3-208ENST00000497498 TSPEAR-AS2P59090 65 aa1.15□□□□□ -2.23
CBX3-208ENST00000497498 HAMPP81172 84 aa1.15□□□□□ -2.23
CBX3-208ENST00000497498 BSPH1Q075Z2 132 aa1.15□□□□□ -2.23
CBX3-208ENST00000497498 GPHB5Q86YW7 130 aa1.15□□□□□ -2.23
CBX3-208ENST00000497498 Q8NAQ8 132 aa1.15□□□□□ -2.23
CBX3-208ENST00000497498 CDC42SE2Q9NRR3 84 aa1.15□□□□□ -2.23
CBX3-208ENST00000497498 A0A096LNT2 108 aa1.14□□□□□ -2.23
CBX3-208ENST00000497498 TRBV10-1A0A0K0K1A3 114 aa1.14□□□□□ -2.23
CBX3-208ENST00000497498 ETDCA0A1B0GVM5 59 aa1.14□□□□□ -2.23
CBX3-208ENST00000497498 SNRNP200O75643 2136 aaKnown RBP1.14□□□□□ -2.23
CBX3-208ENST00000497498 MSMBP08118 114 aa1.14□□□□□ -2.23
CBX3-208ENST00000497498 LINC00313P59037 77 aa1.14□□□□□ -2.23
CBX3-208ENST00000497498 Q5VV11 94 aa1.14□□□□□ -2.23
CBX3-208ENST00000497498 Q6ZQT0 140 aa1.14□□□□□ -2.23
CBX3-208ENST00000497498 WFDC9Q8NEX5 89 aa1.14□□□□□ -2.23
CBX3-208ENST00000497498 LINC00208Q96KT6 92 aa1.14□□□□□ -2.23
CBX3-208ENST00000497498 PRR15LQ9BU68 103 aa1.14□□□□□ -2.23
CBX3-208ENST00000497498 KLK9Q9UKQ9 250 aa1.14□□□□□ -2.23
CBX3-208ENST00000497498 IGKV2-40A0A087WW87 121 aaPredicted RBP1.13□□□□□ -2.23
CBX3-208ENST00000497498 IGHV3-73A0A0B4J1V6 119 aa1.13□□□□□ -2.23
CBX3-208ENST00000497498 A0A1B0GU33 70 aa1.13□□□□□ -2.23
CBX3-208ENST00000497498 I3L2K1 104 aa1.13□□□□□ -2.23
CBX3-208ENST00000497498 NCR3O14931 201 aa1.13□□□□□ -2.23
CBX3-208ENST00000497498 IGKV2D-40P01614 121 aaPredicted RBP1.13□□□□□ -2.23
CBX3-208ENST00000497498 COX7BP24311 80 aa1.13□□□□□ -2.23
CBX3-208ENST00000497498 WT1-ASQ06250 92 aa1.13□□□□□ -2.23
CBX3-208ENST00000497498 FAM229BQ4G0N7 80 aa1.13□□□□□ -2.23
CBX3-208ENST00000497498 RPL39P5Q59GN2 51 aa1.13□□□□□ -2.23
CBX3-208ENST00000497498 Q8N814 137 aa1.13□□□□□ -2.23
CBX3-208ENST00000497498 SMIM11BQ8TCY0 68 aa1.13□□□□□ -2.23
CBX3-208ENST00000497498 ZNF625Q96I27 306 aaPredicted RBP1.13□□□□□ -2.23
CBX3-208ENST00000497498 WFDC10AQ9H1F0 79 aa1.13□□□□□ -2.23
CBX3-208ENST00000497498 C22orf24Q9Y442 160 aa1.13□□□□□ -2.23
CBX3-208ENST00000497498 LINC01558Q9Y6Z2 57 aa1.13□□□□□ -2.23
CBX3-208ENST00000497498 MINOS1-NBL1R4GNA1 71 aa1.13□□□□□ -2.23
CBX3-208ENST00000497498 TNXBP22105 4242 aa1.12□□□□□ -2.23
CBX3-208ENST00000497498 USH2AO75445 5202 aa1.12□□□□□ -2.23
CBX3-208ENST00000497498 TRGV2A0A075B6R0 118 aa1.12□□□□□ -2.23
CBX3-208ENST00000497498 TRBV6-4A0A1B0GX49 114 aa1.12□□□□□ -2.23
CBX3-208ENST00000497498 DEFB108AA8MXU0 73 aa1.12□□□□□ -2.23
CBX3-208ENST00000497498 K7EIL1 84 aa1.12□□□□□ -2.23
CBX3-208ENST00000497498 K7EIM0 57 aa1.12□□□□□ -2.23
CBX3-208ENST00000497498 NDUFA4O00483 81 aa1.12□□□□□ -2.23
CBX3-208ENST00000497498 IGKV1-16P04430 117 aa1.12□□□□□ -2.23
CBX3-208ENST00000497498 RPL39P62891 51 aaKnown RBP1.12□□□□□ -2.23
CBX3-208ENST00000497498 SPAG11BQ08648 103 aa1.12□□□□□ -2.23
CBX3-208ENST00000497498 COX17Q14061 63 aa1.12□□□□□ -2.23
CBX3-208ENST00000497498 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.12□□□□□ -2.23
CBX3-208ENST00000497498 Q8TAT8 98 aa1.12□□□□□ -2.23
CBX3-208ENST00000497498 COX7B2Q8TF08 81 aa1.12□□□□□ -2.23
CBX3-208ENST00000497498 RPL39LQ96EH5 51 aaKnown RBP1.12□□□□□ -2.23
CBX3-208ENST00000497498 C20orf166-AS1Q96NR2 134 aa1.12□□□□□ -2.23
CBX3-208ENST00000497498 GAFA1Q96PS6 74 aa1.12□□□□□ -2.23
CBX3-208ENST00000497498 KCNQ1DNQ9H478 68 aa1.12□□□□□ -2.23
CBX3-208ENST00000497498 IGLV3-9A0A075B6K5 115 aa1.11□□□□□ -2.23
CBX3-208ENST00000497498 IGHV3-64A0A075B6Q5 118 aa1.11□□□□□ -2.23
CBX3-208ENST00000497498 TRAV10A0A0B4J240 114 aa1.11□□□□□ -2.23
CBX3-208ENST00000497498 IGKV2-29A2NJV5 120 aaPredicted RBP1.11□□□□□ -2.23
CBX3-208ENST00000497498 H0Y9P7 68 aa1.11□□□□□ -2.23
CBX3-208ENST00000497498 M0QY20 66 aa1.11□□□□□ -2.23
CBX3-208ENST00000497498 LINC00158P58513 81 aa1.11□□□□□ -2.23
CBX3-208ENST00000497498 CNBPP62633 177 aaKnown RBP1.11□□□□□ -2.23
CBX3-208ENST00000497498 KLK9Q2XQG4 91 aa1.11□□□□□ -2.23
CBX3-208ENST00000497498 DEFB110Q30KQ9 67 aa1.11□□□□□ -2.23
CBX3-208ENST00000497498 LELP1Q5T871 98 aa1.11□□□□□ -2.23
CBX3-208ENST00000497498 SPAG11AQ6PDA7 123 aa1.11□□□□□ -2.23
CBX3-208ENST00000497498 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.11□□□□□ -2.23
CBX3-208ENST00000497498 ARFGEF3Q5TH69 2177 aa1.11□□□□□ -2.23
CBX3-208ENST00000497498 IGHV3-15A0A0B4J1V0 119 aa1.1□□□□□ -2.23
CBX3-208ENST00000497498 TRGV4A0A0C4DH28 118 aa1.1□□□□□ -2.23
CBX3-208ENST00000497498 UQCR11O14957 56 aa1.1□□□□□ -2.23
CBX3-208ENST00000497498 RNASE3P12724 160 aaKnown RBP1.1□□□□□ -2.23
CBX3-208ENST00000497498 C10orf55Q5SWW7 151 aa1.1□□□□□ -2.23
CBX3-208ENST00000497498 LINC00575Q6W349 94 aa1.1□□□□□ -2.23
CBX3-208ENST00000497498 Q8IZM0 81 aa1.1□□□□□ -2.23
CBX3-208ENST00000497498 ZFAND2AQ8N6M9 145 aa1.1□□□□□ -2.23
CBX3-208ENST00000497498 CNEP1R1Q8N9A8 125 aa1.1□□□□□ -2.23
CBX3-208ENST00000497498 CDKN2A-AS1Q9UH64 79 aa1.1□□□□□ -2.23
CBX3-208ENST00000497498 ARHGAP32A7KAX9 2087 aa1.09□□□□□ -2.23
CBX3-208ENST00000497498 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.09□□□□□ -2.23
CBX3-208ENST00000497498 A0A087WSZ3 146 aa1.09□□□□□ -2.23
CBX3-208ENST00000497498 DEFB131BA0A096LNP1 70 aa1.09□□□□□ -2.23
CBX3-208ENST00000497498 H3BUA1 57 aa1.09□□□□□ -2.23
CBX3-208ENST00000497498 CCL3P10147 92 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms