RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 PPP1R1CQ8WVI7 109 aa0.78□□□□□ -2.28
UBR4-217ENST00000497018 PROK2Q9HC23 129 aa0.78□□□□□ -2.28
UBR4-217ENST00000497018 SMCO4Q9NRQ5 59 aa0.78□□□□□ -2.28
UBR4-217ENST00000497018 R4GMQ9 66 aa0.78□□□□□ -2.28
UBR4-217ENST00000497018 ARL2-SNX15V9GYD0 113 aa0.78□□□□□ -2.28
UBR4-217ENST00000497018 DNAH17Q9UFH2 4485 aa0.78□□□□□ -2.28
UBR4-217ENST00000497018 MUC12Q9UKN1 5478 aa0.77□□□□□ -2.29
UBR4-217ENST00000497018 TRGV1A0A0A0MS02 117 aa0.77□□□□□ -2.29
UBR4-217ENST00000497018 F8WEM9 126 aa0.77□□□□□ -2.29
UBR4-217ENST00000497018 H3BUT2 72 aa0.77□□□□□ -2.29
UBR4-217ENST00000497018 PDCD5O14737 125 aa0.77□□□□□ -2.29
UBR4-217ENST00000497018 CFDP00746 253 aaPredicted RBP0.77□□□□□ -2.29
UBR4-217ENST00000497018 SPRR2EP22531 72 aa0.77□□□□□ -2.29
UBR4-217ENST00000497018 SPRR2BP35325 72 aa0.77□□□□□ -2.29
UBR4-217ENST00000497018 SPRR2AP35326 72 aa0.77□□□□□ -2.29
UBR4-217ENST00000497018 Q6ZQY7 126 aa0.77□□□□□ -2.29
UBR4-217ENST00000497018 LINC00643Q86TS7 51 aa0.77□□□□□ -2.29
UBR4-217ENST00000497018 BAGE3Q86Y29 109 aa0.77□□□□□ -2.29
UBR4-217ENST00000497018 BAGE2Q86Y30 109 aa0.77□□□□□ -2.29
UBR4-217ENST00000497018 KANTRA0A1W2PQU2 76 aa0.76□□□□□ -2.29
UBR4-217ENST00000497018 C7orf77A4D0Y5 90 aa0.76□□□□□ -2.29
UBR4-217ENST00000497018 ZNF815PA8K554 130 aa0.76□□□□□ -2.29
UBR4-217ENST00000497018 IQCF6A8MYZ5 107 aa0.76□□□□□ -2.29
UBR4-217ENST00000497018 FXYD1O00168 92 aa0.76□□□□□ -2.29
UBR4-217ENST00000497018 UQCR11O14957 56 aa0.76□□□□□ -2.29
UBR4-217ENST00000497018 HMGN2P05204 90 aaKnown RBP0.76□□□□□ -2.29
UBR4-217ENST00000497018 ACYP1P07311 99 aa0.76□□□□□ -2.29
UBR4-217ENST00000497018 HMGN3Q15651 99 aa0.76□□□□□ -2.29
UBR4-217ENST00000497018 DEFB135Q30KP9 77 aa0.76□□□□□ -2.29
UBR4-217ENST00000497018 DEFB106AQ8N104 65 aa0.76□□□□□ -2.29
UBR4-217ENST00000497018 LPAP08519 4548 aa0.76□□□□□ -2.29
UBR4-217ENST00000497018 DEFB131BA0A096LNP1 70 aa0.75□□□□□ -2.29
UBR4-217ENST00000497018 GVQW2A0A096LPI5 108 aaPredicted RBP0.75□□□□□ -2.29
UBR4-217ENST00000497018 MYMXA0A1B0GTQ4 84 aa0.75□□□□□ -2.29
UBR4-217ENST00000497018 M0R3E3 92 aa0.75□□□□□ -2.29
UBR4-217ENST00000497018 ARMS2P0C7Q2 107 aa0.75□□□□□ -2.29
UBR4-217ENST00000497018 SPRR2DP22532 72 aa0.75□□□□□ -2.29
UBR4-217ENST00000497018 SMIM11AP58511 58 aa0.75□□□□□ -2.29
UBR4-217ENST00000497018 MT1HP80294 61 aa0.75□□□□□ -2.29
UBR4-217ENST00000497018 KRTAP19-6Q3LI70 58 aa0.75□□□□□ -2.29
UBR4-217ENST00000497018 PSMG4Q5JS54 123 aa0.75□□□□□ -2.29
UBR4-217ENST00000497018 KRTAP13-1Q8IUC0 172 aa0.75□□□□□ -2.29
UBR4-217ENST00000497018 PLAC4Q8WY50 150 aa0.75□□□□□ -2.29
UBR4-217ENST00000497018 PRR15LQ9BU68 103 aa0.75□□□□□ -2.29
UBR4-217ENST00000497018 TRBV30A0A0K0K1B3 111 aa0.74□□□□□ -2.29
UBR4-217ENST00000497018 CTXND1A0A1B0GTU2 59 aa0.74□□□□□ -2.29
UBR4-217ENST00000497018 G3V318 75 aa0.74□□□□□ -2.29
UBR4-217ENST00000497018 KRTAP12-4P60329 112 aa0.74□□□□□ -2.29
UBR4-217ENST00000497018 DEFA5Q01523 94 aa0.74□□□□□ -2.29
UBR4-217ENST00000497018 SPATA8Q6RVD6 105 aa0.74□□□□□ -2.29
UBR4-217ENST00000497018 HEPN1Q6WQI6 88 aa0.74□□□□□ -2.29
UBR4-217ENST00000497018 TRAV1-2A0A0B4J238 106 aa0.73□□□□□ -2.29
UBR4-217ENST00000497018 A0A1B0GWA3 101 aa0.73□□□□□ -2.29
UBR4-217ENST00000497018 DEFB4AO15263 64 aa0.73□□□□□ -2.29
UBR4-217ENST00000497018 MRPL33O75394 65 aaKnown RBP0.73□□□□□ -2.29
UBR4-217ENST00000497018 MGPP08493 103 aa0.73□□□□□ -2.29
UBR4-217ENST00000497018 ACYP2P14621 99 aa0.73□□□□□ -2.29
UBR4-217ENST00000497018 KRTAP5-9P26371 169 aa0.73□□□□□ -2.29
UBR4-217ENST00000497018 SPINK7P58062 85 aa0.73□□□□□ -2.29
UBR4-217ENST00000497018 PRB3Q04118 309 aaPredicted RBP0.73□□□□□ -2.29
UBR4-217ENST00000497018 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.73□□□□□ -2.29
UBR4-217ENST00000497018 LINC00575Q6W349 94 aa0.73□□□□□ -2.29
UBR4-217ENST00000497018 Q6ZRX8 168 aa0.73□□□□□ -2.29
UBR4-217ENST00000497018 AHNAKQ09666 5890 aaKnown RBP0.73□□□□□ -2.29
UBR4-217ENST00000497018 A0A087WVE0 104 aa0.72□□□□□ -2.29
UBR4-217ENST00000497018 NCR3O14931 201 aa0.72□□□□□ -2.29
UBR4-217ENST00000497018 RPL37P61927 97 aaKnown RBP0.72□□□□□ -2.29
UBR4-217ENST00000497018 KRTAP5-11Q6L8G4 156 aa0.72□□□□□ -2.29
UBR4-217ENST00000497018 TMEM263Q8WUH6 116 aaKnown RBP0.72□□□□□ -2.29
UBR4-217ENST00000497018 SMIM4Q8WVI0 70 aa0.72□□□□□ -2.29
UBR4-217ENST00000497018 UBE2D4Q9Y2X8 147 aa0.72□□□□□ -2.29
UBR4-217ENST00000497018 MUC5BQ9HC84 5762 aaPredicted RBP0.72□□□□□ -2.29
UBR4-217ENST00000497018 CEBPZOSA8MTT3 80 aa0.71□□□□□ -2.3
UBR4-217ENST00000497018 D6R8Y8 96 aa0.71□□□□□ -2.3
UBR4-217ENST00000497018 LEPROTL1O95214 131 aa0.71□□□□□ -2.3
UBR4-217ENST00000497018 SMIM13P0DJ93 91 aa0.71□□□□□ -2.3
UBR4-217ENST00000497018 COX17Q14061 63 aa0.71□□□□□ -2.3
UBR4-217ENST00000497018 PLGLAQ15195 96 aa0.71□□□□□ -2.3
UBR4-217ENST00000497018 SPINK13Q1W4C9 94 aa0.71□□□□□ -2.3
UBR4-217ENST00000497018 Q6JHZ5 121 aa0.71□□□□□ -2.3
UBR4-217ENST00000497018 Q6ZSA8 131 aa0.71□□□□□ -2.3
UBR4-217ENST00000497018 MUSTN1Q8IVN3 82 aa0.71□□□□□ -2.3
UBR4-217ENST00000497018 SMIM11BQ8TCY0 68 aa0.71□□□□□ -2.3
UBR4-217ENST00000497018 HTN3P15516 51 aa0.7□□□□□ -2.3
UBR4-217ENST00000497018 KRTAP12-3P60328 96 aa0.7□□□□□ -2.3
UBR4-217ENST00000497018 LCE3AQ5TA76 89 aa0.7□□□□□ -2.3
UBR4-217ENST00000497018 C10orf113Q5VZT2 155 aa0.7□□□□□ -2.3
UBR4-217ENST00000497018 COX6B2Q6YFQ2 88 aa0.7□□□□□ -2.3
UBR4-217ENST00000497018 DEFB107AQ8IZN7 70 aa0.7□□□□□ -2.3
UBR4-217ENST00000497018 TRBV7-4A0A0J9YYF1 115 aa0.69□□□□□ -2.3
UBR4-217ENST00000497018 UMAD1C9J7I0 102 aa0.69□□□□□ -2.3
UBR4-217ENST00000497018 M0R1W7 72 aa0.69□□□□□ -2.3
UBR4-217ENST00000497018 ANGP03950 147 aaKnown RBP0.69□□□□□ -2.3
UBR4-217ENST00000497018 ARL14EPLP0DKL9 152 aa0.69□□□□□ -2.3
UBR4-217ENST00000497018 C6orf201Q7Z4U5 140 aa0.69□□□□□ -2.3
UBR4-217ENST00000497018 SPRR2FQ96RM1 72 aa0.69□□□□□ -2.3
UBR4-217ENST00000497018 LINC00959A0A1B0GUT2 108 aa0.68□□□□□ -2.3
UBR4-217ENST00000497018 H0Y9P7 68 aa0.68□□□□□ -2.3
UBR4-217ENST00000497018 HILPDAQ9Y5L2 63 aa0.68□□□□□ -2.3
UBR4-217ENST00000497018 MDN1Q9NU22 5596 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms