RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393		A0A0G2JQZ4	141 aa		4.1	□□□□□ -1.75
NVL-223	ENST00000496393	C1orf195	Q5TG92	126 aa		4.1	□□□□□ -1.75
NVL-223	ENST00000496393	LAMTOR3	Q9UHA4	124 aa		4.1	□□□□□ -1.75
NVL-223	ENST00000496393	MT-ATP8	P03928	68 aa		4.09	□□□□□ -1.75
NVL-223	ENST00000496393	SPRR1B	P22528	89 aa		4.09	□□□□□ -1.75
NVL-223	ENST00000496393	SOSTDC1	Q6X4U4	206 aa		4.09	□□□□□ -1.75
NVL-223	ENST00000496393	DEFB105A	Q8NG35	78 aa		4.09	□□□□□ -1.75
NVL-223	ENST00000496393		A0A1B0GX51	115 aa		4.08	□□□□□ -1.76
NVL-223	ENST00000496393	CLEC2B	Q92478	149 aa		4.08	□□□□□ -1.76
NVL-223	ENST00000496393	IMUP	Q9GZP8	106 aa		4.08	□□□□□ -1.76
NVL-223	ENST00000496393	TEX49	A0A1B0GTD5	131 aa		4.07	□□□□□ -1.76
NVL-223	ENST00000496393	NDUFC2	O95298	119 aa		4.07	□□□□□ -1.76
NVL-223	ENST00000496393	BAALC-AS2	P0C853	105 aa		4.07	□□□□□ -1.76
NVL-223	ENST00000496393	CD164	Q04900	197 aa		4.07	□□□□□ -1.76
NVL-223	ENST00000496393	DNAL4	O96015	105 aa		4.06	□□□□□ -1.76
NVL-223	ENST00000496393	SMIM29	Q86T20	159 aa		4.06	□□□□□ -1.76
NVL-223	ENST00000496393	OR13C6P	Q8NH95	151 aa		4.06	□□□□□ -1.76
NVL-223	ENST00000496393	ANAPC13	Q9BS18	74 aa		4.05	□□□□□ -1.76
NVL-223	ENST00000496393	DHRS4-AS1	Q9P1J3	65 aa		4.05	□□□□□ -1.76
NVL-223	ENST00000496393	TRBV7-7	A0A0K0K1E9	115 aa		4.04	□□□□□ -1.76
NVL-223	ENST00000496393		H3BQ85	93 aa		4.04	□□□□□ -1.76
NVL-223	ENST00000496393	LCE1A	Q5T7P2	110 aa		4.04	□□□□□ -1.76
NVL-223	ENST00000496393		Q5XG85	94 aa		4.04	□□□□□ -1.76
NVL-223	ENST00000496393	LINC00643	Q86TS7	51 aa		4.04	□□□□□ -1.76
NVL-223	ENST00000496393	COX7B	P24311	80 aa		4.03	□□□□□ -1.76
NVL-223	ENST00000496393	NDUFV3	P56181	108 aa	Known RBP	4.03	□□□□□ -1.76
NVL-223	ENST00000496393	C6orf99	Q4VX62	202 aa		4.03	□□□□□ -1.76
NVL-223	ENST00000496393	SMIM11B	Q8TCY0	68 aa		4.03	□□□□□ -1.76
NVL-223	ENST00000496393	MACF1	Q9UPN3	7388 aa	Known RBP	4.03	□□□□□ -1.76
NVL-223	ENST00000496393	SYNE2	Q8WXH0	6885 aa	Known RBP	4.02	□□□□□ -1.77
NVL-223	ENST00000496393	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.02	□□□□□ -1.77
NVL-223	ENST00000496393	MT2A	P02795	61 aa		4.02	□□□□□ -1.77
NVL-223	ENST00000496393	ELOF1	P60002	83 aa	Known RBP	4.02	□□□□□ -1.77
NVL-223	ENST00000496393	ATP11AUN	Q6ZP68	121 aa		4.02	□□□□□ -1.77
NVL-223	ENST00000496393	OBSCN-AS1	Q96MR7	158 aa		4.02	□□□□□ -1.77
NVL-223	ENST00000496393	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.01	□□□□□ -1.77
NVL-223	ENST00000496393	ORMDL1	Q9P0S3	153 aa		4.01	□□□□□ -1.77
NVL-223	ENST00000496393	TMEM256-PLSCR3	K7ERE1	68 aa		4	□□□□□ -1.77
NVL-223	ENST00000496393	MT1F	P04733	61 aa		4	□□□□□ -1.77
NVL-223	ENST00000496393	FAM218A	Q96MZ4	157 aa		4	□□□□□ -1.77
NVL-223	ENST00000496393		Q6JHZ5	121 aa		3.98	□□□□□ -1.77
NVL-223	ENST00000496393		Q75L30	129 aa		3.98	□□□□□ -1.77
NVL-223	ENST00000496393	IGLV5-48	A0A075B6I7	105 aa		3.97	□□□□□ -1.77
NVL-223	ENST00000496393	PDE6G	P18545	87 aa		3.97	□□□□□ -1.77
NVL-223	ENST00000496393	KRTAP10-7	P60409	375 aa	Predicted RBP	3.97	□□□□□ -1.77
NVL-223	ENST00000496393	KRTAP5-11	Q6L8G4	156 aa		3.97	□□□□□ -1.77
NVL-223	ENST00000496393	ATOX1	O00244	68 aa		3.96	□□□□□ -1.78
NVL-223	ENST00000496393	CCK	P06307	115 aa		3.96	□□□□□ -1.78
NVL-223	ENST00000496393	ATP5EP2	Q5VTU8	51 aa		3.96	□□□□□ -1.78
NVL-223	ENST00000496393	TRBV7-6	A0A0J9YX20	115 aa		3.95	□□□□□ -1.78
NVL-223	ENST00000496393	FAM236A	A0A1B0GUQ0	79 aa		3.95	□□□□□ -1.78
NVL-223	ENST00000496393	FAM236B	A0A1B0GV22	79 aa		3.95	□□□□□ -1.78
NVL-223	ENST00000496393	UQCRQ	O14949	82 aa		3.95	□□□□□ -1.78
NVL-223	ENST00000496393	KRTAP10-10	P60014	251 aa		3.95	□□□□□ -1.78
NVL-223	ENST00000496393	LINC00575	Q6W349	94 aa		3.95	□□□□□ -1.78
NVL-223	ENST00000496393		Q96NJ1	140 aa		3.95	□□□□□ -1.78
NVL-223	ENST00000496393	FAM236D	A0A1B0GTK5	79 aa		3.94	□□□□□ -1.78
NVL-223	ENST00000496393	hADV29S1	A0JD25	119 aa		3.94	□□□□□ -1.78
NVL-223	ENST00000496393		F8WEM9	126 aa		3.94	□□□□□ -1.78
NVL-223	ENST00000496393	FAM236C	P0DP71	79 aa		3.94	□□□□□ -1.78
NVL-223	ENST00000496393	C14orf132	Q9NPU4	83 aa		3.94	□□□□□ -1.78
NVL-223	ENST00000496393	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	3.93	□□□□□ -1.78
NVL-223	ENST00000496393	UBL5	Q9BZL1	73 aa		3.93	□□□□□ -1.78
NVL-223	ENST00000496393	LOC110117498	A0A087WWA1	95 aa		3.92	□□□□□ -1.78
NVL-223	ENST00000496393	CCDC179	H3BU77	68 aa		3.92	□□□□□ -1.78
NVL-223	ENST00000496393	COX7C	P15954	63 aa		3.92	□□□□□ -1.78
NVL-223	ENST00000496393	HIST1H4A	P62805	103 aa	Known RBP	3.92	□□□□□ -1.78
NVL-223	ENST00000496393	RBM3	P98179	157 aa	Known RBP	3.92	□□□□□ -1.78
NVL-223	ENST00000496393	IGFL1	Q6UW32	110 aa		3.92	□□□□□ -1.78
NVL-223	ENST00000496393	C20orf166-AS1	Q96NR2	134 aa		3.91	□□□□□ -1.78
NVL-223	ENST00000496393	LINC00846	Q9NV44	126 aa		3.91	□□□□□ -1.78
NVL-223	ENST00000496393	DSCR8	Q96T75	97 aa		3.9	□□□□□ -1.79
NVL-223	ENST00000496393		A8MUU9	505 aa		3.89	□□□□□ -1.79
NVL-223	ENST00000496393	KRTAP19-6	Q3LI70	58 aa		3.89	□□□□□ -1.79
NVL-223	ENST00000496393		Q6ZQT0	140 aa		3.89	□□□□□ -1.79
NVL-223	ENST00000496393	SMIM20	Q8N5G0	67 aa		3.89	□□□□□ -1.79
NVL-223	ENST00000496393	SERP2	Q8N6R1	65 aa		3.89	□□□□□ -1.79
NVL-223	ENST00000496393	SS18L2	Q9UHA2	77 aa		3.89	□□□□□ -1.79
NVL-223	ENST00000496393	IGKV3D-7	A0A0C4DH55	119 aa		3.87	□□□□□ -1.79
NVL-223	ENST00000496393		A0A1B0GW54	56 aa		3.87	□□□□□ -1.79
NVL-223	ENST00000496393	DSCR10	P59022	87 aa		3.87	□□□□□ -1.79
NVL-223	ENST00000496393	CXCL6	P80162	114 aa		3.87	□□□□□ -1.79
NVL-223	ENST00000496393	KRTAP6-3	Q3LI67	103 aa		3.87	□□□□□ -1.79
NVL-223	ENST00000496393		Q6ZQY7	126 aa		3.87	□□□□□ -1.79
NVL-223	ENST00000496393	KRTAP16-1	A8MUX0	517 aa		3.86	□□□□□ -1.79
NVL-223	ENST00000496393		Q8N9P0	234 aa	Predicted RBP	3.86	□□□□□ -1.79
NVL-223	ENST00000496393	TRBV7-4	A0A0J9YYF1	115 aa		3.85	□□□□□ -1.79
NVL-223	ENST00000496393	TMEM258	P61165	79 aa		3.85	□□□□□ -1.79
NVL-223	ENST00000496393	HRES1	P13985	223 aa		3.84	□□□□□ -1.79
NVL-223	ENST00000496393	RPS28	P62857	69 aa	Known RBP	3.84	□□□□□ -1.79
NVL-223	ENST00000496393	RBM12B-AS1	Q9P1G2	102 aa		3.84	□□□□□ -1.79
NVL-223	ENST00000496393	TRAV7	A0A075B6U4	112 aa		3.83	□□□□□ -1.8
NVL-223	ENST00000496393		Q6ZVQ6	151 aa		3.83	□□□□□ -1.8
NVL-223	ENST00000496393		J3KT08	172 aa		3.82	□□□□□ -1.8
NVL-223	ENST00000496393	MPLKIP	Q8TAP9	179 aa		3.82	□□□□□ -1.8
NVL-223	ENST00000496393	NEB	P20929	6669 aa		3.81	□□□□□ -1.8
NVL-223	ENST00000496393		A0A087WVE0	104 aa		3.81	□□□□□ -1.8
NVL-223	ENST00000496393	KRTAP2-2	Q9BYT5	123 aa		3.81	□□□□□ -1.8
NVL-223	ENST00000496393		A0A087WSZ3	146 aa		3.8	□□□□□ -1.8
NVL-223	ENST00000496393	NREP	Q16612	68 aa		3.8	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms