RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 KMT2CQ8NEZ4 4911 aaKnown RBP5.52□□□□□ -1.53
HPS4-217ENST00000496385 DNAH10OSP0CZ25 163 aa5.52□□□□□ -1.53
HPS4-217ENST00000496385 A0A0A0MQY5 61 aa5.51□□□□□ -1.53
HPS4-217ENST00000496385 A0A1B0GU69 56 aa5.51□□□□□ -1.53
HPS4-217ENST00000496385 NUPR2A6NF83 97 aa5.51□□□□□ -1.53
HPS4-217ENST00000496385 UQCR11O14957 56 aa5.51□□□□□ -1.53
HPS4-217ENST00000496385 MRPL34Q9BQ48 92 aaKnown RBP5.5□□□□□ -1.53
HPS4-217ENST00000496385 PRLHP81277 87 aa5.5□□□□□ -1.53
HPS4-217ENST00000496385 MIR22HGQ0VDD5 57 aa5.5□□□□□ -1.53
HPS4-217ENST00000496385 LY6G6CO95867 125 aa5.49□□□□□ -1.53
HPS4-217ENST00000496385 Q96NJ1 140 aa5.49□□□□□ -1.53
HPS4-217ENST00000496385 A0A1B0GVX0 72 aa5.48□□□□□ -1.53
HPS4-217ENST00000496385 APLNQ9ULZ1 77 aa5.48□□□□□ -1.53
HPS4-217ENST00000496385 CSAG1Q6PB30 78 aa5.47□□□□□ -1.53
HPS4-217ENST00000496385 DYNC2H1Q8NCM8 4307 aaKnown RBP5.47□□□□□ -1.53
HPS4-217ENST00000496385 DMAC1Q96GE9 116 aa5.47□□□□□ -1.53
HPS4-217ENST00000496385 KMT2AQ03164 3969 aa5.45□□□□□ -1.54
HPS4-217ENST00000496385 HYDINQ4G0P3 5121 aa5.45□□□□□ -1.54
HPS4-217ENST00000496385 CDK2AP2O75956 126 aa5.45□□□□□ -1.54
HPS4-217ENST00000496385 UBE2DNLQ8IWF7 75 aa5.44□□□□□ -1.54
HPS4-217ENST00000496385 RYR3Q15413 4870 aa5.43□□□□□ -1.54
HPS4-217ENST00000496385 KRTAP13-3Q3SY46 172 aa5.43□□□□□ -1.54
HPS4-217ENST00000496385 DNAH1Q9P2D7 4330 aa5.42□□□□□ -1.54
HPS4-217ENST00000496385 IGHV6-1A0A0B4J1U7 121 aa5.42□□□□□ -1.54
HPS4-217ENST00000496385 SACSQ9NZJ4 4579 aa5.42□□□□□ -1.54
HPS4-217ENST00000496385 ALMS1Q8TCU4 4167 aa5.41□□□□□ -1.54
HPS4-217ENST00000496385 ZNF861PO60384 105 aa5.4□□□□□ -1.54
HPS4-217ENST00000496385 A0A096LNI7 61 aa5.39□□□□□ -1.55
HPS4-217ENST00000496385 RYR2Q92736 4967 aa5.39□□□□□ -1.55
HPS4-217ENST00000496385 C1orf134Q5TEV5 83 aa5.38□□□□□ -1.55
HPS4-217ENST00000496385 VPS13DQ5THJ4 4388 aa5.38□□□□□ -1.55
HPS4-217ENST00000496385 KRTAP1-5Q9BYS1 174 aa5.37□□□□□ -1.55
HPS4-217ENST00000496385 ROMO1P60602 79 aa5.36□□□□□ -1.55
HPS4-217ENST00000496385 Q5W150 140 aa5.36□□□□□ -1.55
HPS4-217ENST00000496385 FRAS1Q86XX4 4008 aa5.36□□□□□ -1.55
HPS4-217ENST00000496385 KRTAP13-1Q8IUC0 172 aa5.35□□□□□ -1.55
HPS4-217ENST00000496385 LINC00483Q53H64 154 aa5.34□□□□□ -1.55
HPS4-217ENST00000496385 ZNF706Q9Y5V0 76 aaPredicted RBP5.34□□□□□ -1.55
HPS4-217ENST00000496385 DNAH10Q8IVF4 4471 aa5.33□□□□□ -1.56
HPS4-217ENST00000496385 NBDYA0A0U1RRE5 68 aa5.33□□□□□ -1.56
HPS4-217ENST00000496385 KRTAP25-1Q3LHN0 102 aa5.33□□□□□ -1.56
HPS4-217ENST00000496385 IGLV7-43P04211 117 aa5.33□□□□□ -1.56
HPS4-217ENST00000496385 KRTAP11-1Q8IUC1 163 aa5.32□□□□□ -1.56
HPS4-217ENST00000496385 DNAH2Q9P225 4427 aa5.32□□□□□ -1.56
HPS4-217ENST00000496385 FAM229AH3BQW9 127 aa5.32□□□□□ -1.56
HPS4-217ENST00000496385 C14orf177Q52M58 125 aa5.31□□□□□ -1.56
HPS4-217ENST00000496385 NOTCH2NLQ7Z3S9 236 aa5.31□□□□□ -1.56
HPS4-217ENST00000496385 CHTF8P0CG12 524 aa5.31□□□□□ -1.56
HPS4-217ENST00000496385 IGLV9-49A0A0B4J1Y8 123 aa5.3□□□□□ -1.56
HPS4-217ENST00000496385 IGKV2-30P06310 120 aa5.29□□□□□ -1.56
HPS4-217ENST00000496385 A8MUU9 505 aa5.27□□□□□ -1.57
HPS4-217ENST00000496385 DNAH6Q9C0G6 4158 aa5.26□□□□□ -1.57
HPS4-217ENST00000496385 EPPK1P58107 5090 aaKnown RBP5.25□□□□□ -1.57
HPS4-217ENST00000496385 Q6ZRN7 208 aaPredicted RBP5.24□□□□□ -1.57
HPS4-217ENST00000496385 FAT2Q9NYQ8 4349 aa5.24□□□□□ -1.57
HPS4-217ENST00000496385 IGLV5-52A0A0A0MRZ9 124 aa5.23□□□□□ -1.57
HPS4-217ENST00000496385 PKHD1P08F94 4074 aa5.22□□□□□ -1.57
HPS4-217ENST00000496385 PKD1P98161 4303 aa5.21□□□□□ -1.58
HPS4-217ENST00000496385 LINC00304Q8N9R0 145 aa5.21□□□□□ -1.58
HPS4-217ENST00000496385 DNAH17Q9UFH2 4485 aa5.21□□□□□ -1.58
HPS4-217ENST00000496385 HECTD4Q9Y4D8 3996 aa5.2□□□□□ -1.58
HPS4-217ENST00000496385 IGKV2D-30A0A075B6S6 120 aa5.2□□□□□ -1.58
HPS4-217ENST00000496385 KRTAP10-2P60368 255 aa5.2□□□□□ -1.58
HPS4-217ENST00000496385 SRRM2Q9UQ35 2752 aaKnown RBP5.2□□□□□ -1.58
HPS4-217ENST00000496385 A0A087WTM6 91 aa5.19□□□□□ -1.58
HPS4-217ENST00000496385 SPINK6Q6UWN8 80 aa5.18□□□□□ -1.58
HPS4-217ENST00000496385 A0A1B0GVY2 172 aa5.17□□□□□ -1.58
HPS4-217ENST00000496385 DNAH11Q96DT5 4516 aa5.17□□□□□ -1.58
HPS4-217ENST00000496385 H0YAA0 97 aa5.15□□□□□ -1.59
HPS4-217ENST00000496385 PANO1I0J062 215 aa5.15□□□□□ -1.59
HPS4-217ENST00000496385 P0C880 135 aa5.15□□□□□ -1.59
HPS4-217ENST00000496385 Q6ZSA8 131 aa5.15□□□□□ -1.59
HPS4-217ENST00000496385 SSBP3-AS1Q7Z2R9 100 aa5.14□□□□□ -1.59
HPS4-217ENST00000496385 SPACA4Q8TDM5 124 aa5.13□□□□□ -1.59
HPS4-217ENST00000496385 DNAH5Q8TE73 4624 aa5.12□□□□□ -1.59
HPS4-217ENST00000496385 K7ERS5 55 aa5.12□□□□□ -1.59
HPS4-217ENST00000496385 KRTAP10-1P60331 282 aa5.11□□□□□ -1.59
HPS4-217ENST00000496385 DYNC1H1Q14204 4646 aaKnown RBP5.11□□□□□ -1.59
HPS4-217ENST00000496385 A0A1B0GU33 70 aa5.1□□□□□ -1.59
HPS4-217ENST00000496385 ANAPC11Q9NYG5 84 aa5.1□□□□□ -1.59
HPS4-217ENST00000496385 KRTAP16-1A8MUX0 517 aa5.1□□□□□ -1.59
HPS4-217ENST00000496385 LRP1BQ9NZR2 4599 aa5.09□□□□□ -1.59
HPS4-217ENST00000496385 KIAA1109Q2LD37 5005 aa5.09□□□□□ -1.59
HPS4-217ENST00000496385 PSORS1C2Q9UIG4 136 aa5.08□□□□□ -1.6
HPS4-217ENST00000496385 BIRC6Q9NR09 4857 aa5.07□□□□□ -1.6
HPS4-217ENST00000496385 CIRBP-AS1Q8TBR5 109 aa5.07□□□□□ -1.6
HPS4-217ENST00000496385 H1FX-AS1Q4G0G2 97 aa5.06□□□□□ -1.6
HPS4-217ENST00000496385 LCE2DQ5TA82 110 aaPredicted RBP5.06□□□□□ -1.6
HPS4-217ENST00000496385 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.05□□□□□ -1.6
HPS4-217ENST00000496385 SPINK1P00995 79 aa5.04□□□□□ -1.6
HPS4-217ENST00000496385 SMR3BP02814 79 aaPredicted RBP5.04□□□□□ -1.6
HPS4-217ENST00000496385 KRTAP3-3Q9BYR6 98 aa5.04□□□□□ -1.6
HPS4-217ENST00000496385 KRTAP3-2Q9BYR7 98 aa5.04□□□□□ -1.6
HPS4-217ENST00000496385 KRTAP17-1Q9BYP8 105 aa5.03□□□□□ -1.6
HPS4-217ENST00000496385 APOBP04114 4563 aaKnown RBP5.02□□□□□ -1.61
HPS4-217ENST00000496385 RYR1P21817 5038 aa5□□□□□ -1.61
HPS4-217ENST00000496385 SPINT4Q6UDR6 99 aa5□□□□□ -1.61
HPS4-217ENST00000496385 C20orf166-AS1Q96NR2 134 aa5□□□□□ -1.61
HPS4-217ENST00000496385 HSPG2P98160 4391 aa5□□□□□ -1.61
HPS4-217ENST00000496385 TYMSOSQ8TAI1 123 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms