RNA–Protein interactions for RNA: ENST00000496108.5

LYSMD4-209, Transcript of LysM domain containing 4, humanhuman

TSL 2

Gene LYSMD4, Length 2,222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-209ENST00000496108 TGP01266 2768 aa12.25□□□□□ -0.45
LYSMD4-209ENST00000496108 SPACA4Q8TDM5 124 aa12.24□□□□□ -0.45
LYSMD4-209ENST00000496108 A0A087X002 238 aa12.21□□□□□ -0.46
LYSMD4-209ENST00000496108 NOTCH2NLQ7Z3S9 236 aa12.21□□□□□ -0.46
LYSMD4-209ENST00000496108 KRTAP13-3Q3SY46 172 aa12.19□□□□□ -0.46
LYSMD4-209ENST00000496108 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.19□□□□□ -0.46
LYSMD4-209ENST00000496108 Q6ZRN7 208 aaPredicted RBP12.18□□□□□ -0.46
LYSMD4-209ENST00000496108 NBDYA0A0U1RRE5 68 aa12.17□□□□□ -0.46
LYSMD4-209ENST00000496108 PRR26Q8N8Z3 221 aa12.14□□□□□ -0.47
LYSMD4-209ENST00000496108 Q5W150 140 aa12.14□□□□□ -0.47
LYSMD4-209ENST00000496108 COL7A1Q02388 2944 aa12.13□□□□□ -0.47
LYSMD4-209ENST00000496108 ACYP2P14621 99 aa12.13□□□□□ -0.47
LYSMD4-209ENST00000496108 IGLV5-52A0A0A0MRZ9 124 aa12.11□□□□□ -0.47
LYSMD4-209ENST00000496108 PSORS1C2Q9UIG4 136 aa12.1□□□□□ -0.47
LYSMD4-209ENST00000496108 ZNF861PO60384 105 aa12.09□□□□□ -0.47
LYSMD4-209ENST00000496108 DYNC2H1Q8NCM8 4307 aaKnown RBP12.07□□□□□ -0.48
LYSMD4-209ENST00000496108 DMAC1Q96GE9 116 aa12.06□□□□□ -0.48
LYSMD4-209ENST00000496108 ANAPC11Q9NYG5 84 aa12.06□□□□□ -0.48
LYSMD4-209ENST00000496108 C8orf87E5RJ46 101 aa12.04□□□□□ -0.48
LYSMD4-209ENST00000496108 SPINK6Q6UWN8 80 aa12.02□□□□□ -0.48
LYSMD4-209ENST00000496108 STAB2Q8WWQ8 2551 aa12.02□□□□□ -0.48
LYSMD4-209ENST00000496108 CSMD3Q7Z407 3707 aa12.01□□□□□ -0.49
LYSMD4-209ENST00000496108 A0A087WTM6 91 aa11.98□□□□□ -0.49
LYSMD4-209ENST00000496108 ALMS1Q8TCU4 4167 aa11.98□□□□□ -0.49
LYSMD4-209ENST00000496108 LINC00313P59037 77 aa11.95□□□□□ -0.5
LYSMD4-209ENST00000496108 DNAH7Q8WXX0 4024 aa11.95□□□□□ -0.5
LYSMD4-209ENST00000496108 FAM229AH3BQW9 127 aa11.94□□□□□ -0.5
LYSMD4-209ENST00000496108 NUPR2A6NF83 97 aa11.94□□□□□ -0.5
LYSMD4-209ENST00000496108 RTL8CO15255 209 aa11.94□□□□□ -0.5
LYSMD4-209ENST00000496108 A0A1B0GU69 56 aa11.92□□□□□ -0.5
LYSMD4-209ENST00000496108 DNAH8Q96JB1 4490 aa11.92□□□□□ -0.5
LYSMD4-209ENST00000496108 SPATA8Q6RVD6 105 aa11.91□□□□□ -0.5
LYSMD4-209ENST00000496108 CIRBP-AS1Q8TBR5 109 aa11.91□□□□□ -0.5
LYSMD4-209ENST00000496108 PLA2G1BP04054 148 aaKnown RBP11.9□□□□□ -0.5
LYSMD4-209ENST00000496108 SSBP3-AS1Q7Z2R9 100 aa11.89□□□□□ -0.51
LYSMD4-209ENST00000496108 IGKV2-30P06310 120 aa11.88□□□□□ -0.51
LYSMD4-209ENST00000496108 IGLV7-43P04211 117 aa11.87□□□□□ -0.51
LYSMD4-209ENST00000496108 PLECQ15149 4684 aaKnown RBP11.87□□□□□ -0.51
LYSMD4-209ENST00000496108 PRAC1Q96KF2 57 aa11.82□□□□□ -0.52
LYSMD4-209ENST00000496108 FRAS1Q86XX4 4008 aa11.8□□□□□ -0.52
LYSMD4-209ENST00000496108 HECTD4Q9Y4D8 3996 aa11.8□□□□□ -0.52
LYSMD4-209ENST00000496108 UQCR11O14957 56 aa11.79□□□□□ -0.52
LYSMD4-209ENST00000496108 MIR22HGQ0VDD5 57 aa11.78□□□□□ -0.52
LYSMD4-209ENST00000496108 ADM2Q7Z4H4 148 aa11.75□□□□□ -0.53
LYSMD4-209ENST00000496108 VPS13DQ5THJ4 4388 aa11.74□□□□□ -0.53
LYSMD4-209ENST00000496108 RETNLBQ9BQ08 111 aa11.74□□□□□ -0.53
LYSMD4-209ENST00000496108 KRTAP16-1A8MUX0 517 aa11.72□□□□□ -0.53
LYSMD4-209ENST00000496108 DNAH17Q9UFH2 4485 aa11.71□□□□□ -0.53
LYSMD4-209ENST00000496108 LINC01554Q52M75 96 aa11.68□□□□□ -0.54
LYSMD4-209ENST00000496108 STARD9Q9P2P6 4700 aa11.63□□□□□ -0.55
LYSMD4-209ENST00000496108 IGKV2D-30A0A075B6S6 120 aa11.63□□□□□ -0.55
LYSMD4-209ENST00000496108 KRTAP13-2Q52LG2 175 aa11.61□□□□□ -0.55
LYSMD4-209ENST00000496108 DNAH2Q9P225 4427 aa11.57□□□□□ -0.56
LYSMD4-209ENST00000496108 C1orf134Q5TEV5 83 aa11.56□□□□□ -0.56
LYSMD4-209ENST00000496108 KMT2CQ8NEZ4 4911 aaKnown RBP11.56□□□□□ -0.56
LYSMD4-209ENST00000496108 CSAG1Q6PB30 78 aa11.45□□□□□ -0.58
LYSMD4-209ENST00000496108 KMT2AQ03164 3969 aa11.45□□□□□ -0.58
LYSMD4-209ENST00000496108 DNAH11Q96DT5 4516 aa11.42□□□□□ -0.58
LYSMD4-209ENST00000496108 SACSQ9NZJ4 4579 aa11.42□□□□□ -0.58
LYSMD4-209ENST00000496108 KRTAP1-4P0C5Y4 121 aa11.41□□□□□ -0.58
LYSMD4-209ENST00000496108 LY6G6CO95867 125 aa11.4□□□□□ -0.58
LYSMD4-209ENST00000496108 RYR3Q15413 4870 aa11.4□□□□□ -0.58
LYSMD4-209ENST00000496108 RYR2Q92736 4967 aa11.38□□□□□ -0.59
LYSMD4-209ENST00000496108 SPINK1P00995 79 aa11.37□□□□□ -0.59
LYSMD4-209ENST00000496108 C4orf48Q5BLP8 95 aa11.37□□□□□ -0.59
LYSMD4-209ENST00000496108 KRTAP10-2P60368 255 aa11.36□□□□□ -0.59
LYSMD4-209ENST00000496108 Q6ZSA8 131 aa11.36□□□□□ -0.59
LYSMD4-209ENST00000496108 HYDINQ4G0P3 5121 aa11.35□□□□□ -0.59
LYSMD4-209ENST00000496108 Q8N1X5 172 aa11.35□□□□□ -0.59
LYSMD4-209ENST00000496108 DNAH5Q8TE73 4624 aa11.33□□□□□ -0.6
LYSMD4-209ENST00000496108 DNAH6Q9C0G6 4158 aa11.3□□□□□ -0.6
LYSMD4-209ENST00000496108 A8MUU9 505 aa11.28□□□□□ -0.6
LYSMD4-209ENST00000496108 H0YAA0 97 aa11.28□□□□□ -0.6
LYSMD4-209ENST00000496108 TYMSOSQ8TAI1 123 aa11.27□□□□□ -0.61
LYSMD4-209ENST00000496108 KRTAP10-1P60331 282 aa11.24□□□□□ -0.61
LYSMD4-209ENST00000496108 LRP1BQ9NZR2 4599 aa11.21□□□□□ -0.61
LYSMD4-209ENST00000496108 RPS29P62273 56 aaKnown RBP11.21□□□□□ -0.62
LYSMD4-209ENST00000496108 A0A1B0GU33 70 aa11.17□□□□□ -0.62
LYSMD4-209ENST00000496108 LINC00304Q8N9R0 145 aa11.16□□□□□ -0.62
LYSMD4-209ENST00000496108 KRTAP25-1Q3LHN0 102 aa11.16□□□□□ -0.62
LYSMD4-209ENST00000496108 H1FX-AS1Q4G0G2 97 aa11.13□□□□□ -0.63
LYSMD4-209ENST00000496108 H3BS24 57 aa11.11□□□□□ -0.63
LYSMD4-209ENST00000496108 C20orf166-AS1Q96NR2 134 aa11.09□□□□□ -0.63
LYSMD4-209ENST00000496108 KRTAP3-1Q9BYR8 98 aa11.09□□□□□ -0.63
LYSMD4-209ENST00000496108 PKD1P98161 4303 aa11.06□□□□□ -0.64
LYSMD4-209ENST00000496108 VPS13BQ7Z7G8 4022 aa11.05□□□□□ -0.64
LYSMD4-209ENST00000496108 EPPK1P58107 5090 aaKnown RBP11.01□□□□□ -0.65
LYSMD4-209ENST00000496108 K7ERS5 55 aa10.96□□□□□ -0.66
LYSMD4-209ENST00000496108 FAT2Q9NYQ8 4349 aa10.95□□□□□ -0.66
LYSMD4-209ENST00000496108 ROMO1P60602 79 aa10.95□□□□□ -0.66
LYSMD4-209ENST00000496108 C9orf92A6NGG3 77 aa10.93□□□□□ -0.66
LYSMD4-209ENST00000496108 COX6B2Q6YFQ2 88 aa10.89□□□□□ -0.67
LYSMD4-209ENST00000496108 A0A1B0GVY2 172 aa10.86□□□□□ -0.67
LYSMD4-209ENST00000496108 PKHD1P08F94 4074 aa10.85□□□□□ -0.67
LYSMD4-209ENST00000496108 BIRC6Q9NR09 4857 aa10.84□□□□□ -0.67
LYSMD4-209ENST00000496108 PKHD1L1Q86WI1 4243 aa10.74□□□□□ -0.69
LYSMD4-209ENST00000496108 CRIPTQ9P021 101 aa10.72□□□□□ -0.69
LYSMD4-209ENST00000496108 DYNC1H1Q14204 4646 aaKnown RBP10.71□□□□□ -0.7
LYSMD4-209ENST00000496108 RPL37P61927 97 aaKnown RBP10.7□□□□□ -0.7
LYSMD4-209ENST00000496108 KRTAP10-6P60371 365 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms