RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 R4GMQ9 66 aa1.75□□□□□ -2.13
CCDC39-207ENST00000495817 V9GYV3 84 aa1.75□□□□□ -2.13
CCDC39-207ENST00000495817 DNAH10Q8IVF4 4471 aa1.74□□□□□ -2.13
CCDC39-207ENST00000495817 LINC00322Q6ZN03 302 aaPredicted RBP1.74□□□□□ -2.13
CCDC39-207ENST00000495817 DEFB107AQ8IZN7 70 aa1.74□□□□□ -2.13
CCDC39-207ENST00000495817 GNG13Q9P2W3 67 aa1.74□□□□□ -2.13
CCDC39-207ENST00000495817 TRAV1-2A0A0B4J238 106 aa1.73□□□□□ -2.13
CCDC39-207ENST00000495817 CTXND1A0A1B0GTU2 59 aa1.73□□□□□ -2.13
CCDC39-207ENST00000495817 IFI6P09912 130 aa1.73□□□□□ -2.13
CCDC39-207ENST00000495817 RPL38P63173 70 aaKnown RBP1.73□□□□□ -2.13
CCDC39-207ENST00000495817 BAGE2Q86Y30 109 aa1.73□□□□□ -2.13
CCDC39-207ENST00000495817 LINC00208Q96KT6 92 aa1.73□□□□□ -2.13
CCDC39-207ENST00000495817 Q96NJ1 140 aa1.73□□□□□ -2.13
CCDC39-207ENST00000495817 WFDC6Q9BQY6 131 aa1.73□□□□□ -2.13
CCDC39-207ENST00000495817 FAM103A1Q9BTL3 118 aaKnown RBP1.73□□□□□ -2.13
CCDC39-207ENST00000495817 PLAC8Q9NZF1 115 aa1.73□□□□□ -2.13
CCDC39-207ENST00000495817 STAB2Q8WWQ8 2551 aa1.73□□□□□ -2.13
CCDC39-207ENST00000495817 FAT2Q9NYQ8 4349 aa1.73□□□□□ -2.13
CCDC39-207ENST00000495817 DYNC1H1Q14204 4646 aaKnown RBP1.72□□□□□ -2.13
CCDC39-207ENST00000495817 VPS13DQ5THJ4 4388 aa1.72□□□□□ -2.13
CCDC39-207ENST00000495817 DNAH2Q9P225 4427 aa1.72□□□□□ -2.13
CCDC39-207ENST00000495817 LCE6AA0A183 80 aa1.72□□□□□ -2.13
CCDC39-207ENST00000495817 UQCR11O14957 56 aa1.72□□□□□ -2.13
CCDC39-207ENST00000495817 INE1O15225 51 aa1.72□□□□□ -2.13
CCDC39-207ENST00000495817 ZNF137PP52743 207 aa1.72□□□□□ -2.13
CCDC39-207ENST00000495817 KRTAP10-4P60372 401 aaPredicted RBP1.72□□□□□ -2.13
CCDC39-207ENST00000495817 TMEM14CQ9P0S9 112 aa1.72□□□□□ -2.13
CCDC39-207ENST00000495817 PKHD1P08F94 4074 aa1.71□□□□□ -2.13
CCDC39-207ENST00000495817 TRGV1A0A0A0MS02 117 aa1.71□□□□□ -2.14
CCDC39-207ENST00000495817 SPINK7P58062 85 aa1.71□□□□□ -2.14
CCDC39-207ENST00000495817 C10orf99Q6UWK7 81 aa1.71□□□□□ -2.14
CCDC39-207ENST00000495817 BAGE3Q86Y29 109 aa1.71□□□□□ -2.14
CCDC39-207ENST00000495817 SPRR4Q96PI1 79 aa1.71□□□□□ -2.14
CCDC39-207ENST00000495817 FXYD6Q9H0Q3 95 aa1.71□□□□□ -2.14
CCDC39-207ENST00000495817 KMT2AQ03164 3969 aa1.71□□□□□ -2.14
CCDC39-207ENST00000495817 HERC1Q15751 4861 aa1.71□□□□□ -2.14
CCDC39-207ENST00000495817 HSPG2P98160 4391 aa1.7□□□□□ -2.14
CCDC39-207ENST00000495817 UBR4Q5T4S7 5183 aa1.7□□□□□ -2.14
CCDC39-207ENST00000495817 MGPP08493 103 aa1.7□□□□□ -2.14
CCDC39-207ENST00000495817 FXYD4P59646 89 aa1.7□□□□□ -2.14
CCDC39-207ENST00000495817 ATXN8Q156A1 80 aa1.7□□□□□ -2.14
CCDC39-207ENST00000495817 GDF5OSQ5U4N7 250 aa1.7□□□□□ -2.14
CCDC39-207ENST00000495817 DNAH11Q96DT5 4516 aa1.69□□□□□ -2.14
CCDC39-207ENST00000495817 FCGBPQ9Y6R7 5405 aaPredicted RBP1.69□□□□□ -2.14
CCDC39-207ENST00000495817 A0A1B0GUT8 65 aa1.69□□□□□ -2.14
CCDC39-207ENST00000495817 H0Y9P7 68 aa1.69□□□□□ -2.14
CCDC39-207ENST00000495817 H3BUX3 64 aa1.69□□□□□ -2.14
CCDC39-207ENST00000495817 LINC00472Q9H8W2 130 aa1.69□□□□□ -2.14
CCDC39-207ENST00000495817 ACYP2P14621 99 aa1.68□□□□□ -2.14
CCDC39-207ENST00000495817 WFDC9Q8NEX5 89 aa1.68□□□□□ -2.14
CCDC39-207ENST00000495817 OBSCN-AS1Q96MR7 158 aa1.68□□□□□ -2.14
CCDC39-207ENST00000495817 DNAH6Q9C0G6 4158 aa1.68□□□□□ -2.14
CCDC39-207ENST00000495817 WNK2Q9Y3S1 2297 aa1.67□□□□□ -2.14
CCDC39-207ENST00000495817 CPSF4LA6NMK7 179 aaKnown RBP1.67□□□□□ -2.14
CCDC39-207ENST00000495817 LINC00846Q9NV44 126 aa1.67□□□□□ -2.14
CCDC39-207ENST00000495817 FLG2Q5D862 2391 aaPredicted RBP1.67□□□□□ -2.14
CCDC39-207ENST00000495817 PKD1P98161 4303 aa1.67□□□□□ -2.14
CCDC39-207ENST00000495817 LINC01549A6NIU2 74 aa1.66□□□□□ -2.14
CCDC39-207ENST00000495817 NREPQ16612 68 aa1.66□□□□□ -2.14
CCDC39-207ENST00000495817 DEFB136Q30KP8 78 aa1.66□□□□□ -2.14
CCDC39-207ENST00000495817 TMEM263Q8WUH6 116 aaKnown RBP1.66□□□□□ -2.14
CCDC39-207ENST00000495817 APOBP04114 4563 aaKnown RBP1.66□□□□□ -2.14
CCDC39-207ENST00000495817 DNAH17Q9UFH2 4485 aa1.66□□□□□ -2.14
CCDC39-207ENST00000495817 SNRPGP15A8MWD9 76 aa1.65□□□□□ -2.15
CCDC39-207ENST00000495817 RPS27P42677 84 aaKnown RBP1.65□□□□□ -2.15
CCDC39-207ENST00000495817 FXYD6P3P58550 94 aa1.65□□□□□ -2.15
CCDC39-207ENST00000495817 COX17Q14061 63 aa1.65□□□□□ -2.15
CCDC39-207ENST00000495817 C10orf113Q5VZT2 155 aa1.65□□□□□ -2.15
CCDC39-207ENST00000495817 Q6ZQY7 126 aa1.65□□□□□ -2.15
CCDC39-207ENST00000495817 GAFA1Q96PS6 74 aa1.65□□□□□ -2.15
CCDC39-207ENST00000495817 LRP1BQ9NZR2 4599 aa1.65□□□□□ -2.15
CCDC39-207ENST00000495817 TRAV21A0A0B4J279 112 aa1.64□□□□□ -2.15
CCDC39-207ENST00000495817 CAV3P56539 151 aa1.64□□□□□ -2.15
CCDC39-207ENST00000495817 SPATA8Q6RVD6 105 aa1.64□□□□□ -2.15
CCDC39-207ENST00000495817 KAAG1Q9UBP8 84 aa1.64□□□□□ -2.15
CCDC39-207ENST00000495817 M0R1W7 72 aa1.63□□□□□ -2.15
CCDC39-207ENST00000495817 SMIM4Q8WVI0 70 aa1.63□□□□□ -2.15
CCDC39-207ENST00000495817 MYCBP2O75592 4640 aa1.63□□□□□ -2.15
CCDC39-207ENST00000495817 HMCN2Q8NDA2 5059 aa1.62□□□□□ -2.15
CCDC39-207ENST00000495817 LY6G6CO95867 125 aa1.62□□□□□ -2.15
CCDC39-207ENST00000495817 FAT1Q14517 4588 aa1.62□□□□□ -2.15
CCDC39-207ENST00000495817 G3V318 75 aa1.61□□□□□ -2.15
CCDC39-207ENST00000495817 H3BSH0 61 aa1.61□□□□□ -2.15
CCDC39-207ENST00000495817 LEAP2Q969E1 77 aa1.61□□□□□ -2.15
CCDC39-207ENST00000495817 DNAH5Q8TE73 4624 aa1.61□□□□□ -2.15
CCDC39-207ENST00000495817 LINC00959A0A1B0GUT2 108 aa1.6□□□□□ -2.15
CCDC39-207ENST00000495817 K7EMI3 77 aa1.6□□□□□ -2.15
CCDC39-207ENST00000495817 NDUFB1O75438 58 aa1.6□□□□□ -2.15
CCDC39-207ENST00000495817 TTTY10Q9BZA0 68 aa1.6□□□□□ -2.15
CCDC39-207ENST00000495817 TRBV6-1A0A0K0K1D8 114 aa1.59□□□□□ -2.15
CCDC39-207ENST00000495817 A0A1B0GU69 56 aa1.59□□□□□ -2.15
CCDC39-207ENST00000495817 LINC01590Q5TEZ4 76 aa1.59□□□□□ -2.15
CCDC39-207ENST00000495817 MINOS1Q5TGZ0 78 aa1.59□□□□□ -2.15
CCDC39-207ENST00000495817 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.59□□□□□ -2.15
CCDC39-207ENST00000495817 GVQW2A0A096LPI5 108 aaPredicted RBP1.58□□□□□ -2.16
CCDC39-207ENST00000495817 TRBV30A0A0K0K1B3 111 aa1.58□□□□□ -2.16
CCDC39-207ENST00000495817 ENHOQ6UWT2 76 aa1.58□□□□□ -2.16
CCDC39-207ENST00000495817 SMIM11BQ8TCY0 68 aa1.58□□□□□ -2.16
CCDC39-207ENST00000495817 RNF213Q63HN8 5207 aa1.58□□□□□ -2.16
CCDC39-207ENST00000495817 HAMPP81172 84 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms