RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 HIST1H2BDP58876 126 aa3.51□□□□□ -1.85
GARNL3-219ENST00000495172 HIST1H2BCP62807 126 aa3.51□□□□□ -1.85
GARNL3-219ENST00000495172 HIST2H2BEQ16778 126 aa3.51□□□□□ -1.85
GARNL3-219ENST00000495172 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.51□□□□□ -1.85
GARNL3-219ENST00000495172 LCA10Q71F78 164 aa3.51□□□□□ -1.85
GARNL3-219ENST00000495172 HIST1H2BHQ93079 126 aa3.51□□□□□ -1.85
GARNL3-219ENST00000495172 HIST1H2BNQ99877 126 aa3.51□□□□□ -1.85
GARNL3-219ENST00000495172 HIST1H2BMQ99879 126 aa3.51□□□□□ -1.85
GARNL3-219ENST00000495172 LITAFQ99732 161 aa3.5□□□□□ -1.85
GARNL3-219ENST00000495172 H0Y8G0 127 aa3.49□□□□□ -1.85
GARNL3-219ENST00000495172 HSBP1O75506 76 aa3.49□□□□□ -1.85
GARNL3-219ENST00000495172 SERF1AO75920 110 aa3.49□□□□□ -1.85
GARNL3-219ENST00000495172 CHCHD1Q96BP2 118 aaKnown RBP3.49□□□□□ -1.85
GARNL3-219ENST00000495172 TRAV12-1A0A0B4J245 112 aa3.48□□□□□ -1.85
GARNL3-219ENST00000495172 ZNF815PA8K554 130 aa3.48□□□□□ -1.85
GARNL3-219ENST00000495172 PAM16Q9Y3D7 125 aa3.48□□□□□ -1.85
GARNL3-219ENST00000495172 NMUP48645 174 aa3.47□□□□□ -1.85
GARNL3-219ENST00000495172 COA6Q5JTJ3 125 aaKnown RBP3.47□□□□□ -1.85
GARNL3-219ENST00000495172 S100A6P06703 90 aa3.46□□□□□ -1.86
GARNL3-219ENST00000495172 KRTAP5-4Q6L8H1 288 aa3.46□□□□□ -1.86
GARNL3-219ENST00000495172 A6NDN8 102 aa3.45□□□□□ -1.86
GARNL3-219ENST00000495172 LEPROTL1O95214 131 aa3.45□□□□□ -1.86
GARNL3-219ENST00000495172 FABP4P15090 132 aa3.45□□□□□ -1.86
GARNL3-219ENST00000495172 MT3P25713 68 aa3.45□□□□□ -1.86
GARNL3-219ENST00000495172 SNRPEP62304 92 aaKnown RBP3.45□□□□□ -1.86
GARNL3-219ENST00000495172 TEN1Q86WV5 123 aa3.45□□□□□ -1.86
GARNL3-219ENST00000495172 IFI27L1Q96BM0 104 aa3.45□□□□□ -1.86
GARNL3-219ENST00000495172 KRTAP10-12P60413 245 aa3.44□□□□□ -1.86
GARNL3-219ENST00000495172 HIST3H2BBQ8N257 126 aa3.44□□□□□ -1.86
GARNL3-219ENST00000495172 SMIM11BQ8TCY0 68 aa3.44□□□□□ -1.86
GARNL3-219ENST00000495172 PMCHL2Q9BQD1 86 aa3.44□□□□□ -1.86
GARNL3-219ENST00000495172 HSPB8Q9UJY1 196 aa3.44□□□□□ -1.86
GARNL3-219ENST00000495172 S100A2P29034 98 aa3.43□□□□□ -1.86
GARNL3-219ENST00000495172 LINC00575Q6W349 94 aa3.43□□□□□ -1.86
GARNL3-219ENST00000495172 LYRM7Q5U5X0 104 aa3.42□□□□□ -1.86
GARNL3-219ENST00000495172 HIST1H2BLQ99880 126 aa3.42□□□□□ -1.86
GARNL3-219ENST00000495172 SNHG12Q9BXW3 62 aa3.42□□□□□ -1.86
GARNL3-219ENST00000495172 A4D1N5 150 aa3.41□□□□□ -1.86
GARNL3-219ENST00000495172 SYS1-DBNDD2H3BUS1 97 aa3.41□□□□□ -1.86
GARNL3-219ENST00000495172 C3orf79P0CE67 100 aa3.41□□□□□ -1.86
GARNL3-219ENST00000495172 KRTDAPP60985 99 aa3.41□□□□□ -1.86
GARNL3-219ENST00000495172 CYSTM1Q9H1C7 97 aa3.41□□□□□ -1.86
GARNL3-219ENST00000495172 hADV29S1A0JD25 119 aa3.4□□□□□ -1.87
GARNL3-219ENST00000495172 LINC01545Q5VT33 79 aa3.4□□□□□ -1.87
GARNL3-219ENST00000495172 PET117Q6UWS5 81 aa3.4□□□□□ -1.87
GARNL3-219ENST00000495172 KRTAP19-3Q7Z4W3 81 aa3.4□□□□□ -1.87
GARNL3-219ENST00000495172 PRR15Q8IV56 129 aa3.4□□□□□ -1.87
GARNL3-219ENST00000495172 IGKV3D-7A0A0C4DH55 119 aa3.39□□□□□ -1.87
GARNL3-219ENST00000495172 DPM2O94777 84 aa3.39□□□□□ -1.87
GARNL3-219ENST00000495172 IGKCP01834 107 aa3.39□□□□□ -1.87
GARNL3-219ENST00000495172 A0A1B0GVX0 72 aa3.38□□□□□ -1.87
GARNL3-219ENST00000495172 PLNP26678 52 aa3.38□□□□□ -1.87
GARNL3-219ENST00000495172 C4orf26Q17RF5 130 aa3.38□□□□□ -1.87
GARNL3-219ENST00000495172 CSAG1Q6PB30 78 aa3.38□□□□□ -1.87
GARNL3-219ENST00000495172 TTTY13Q9BZ97 58 aa3.38□□□□□ -1.87
GARNL3-219ENST00000495172 LINC00472Q9H8W2 130 aa3.38□□□□□ -1.87
GARNL3-219ENST00000495172 ATOH7Q8N100 152 aa3.37□□□□□ -1.87
GARNL3-219ENST00000495172 SCGB1D1O95968 90 aa3.36□□□□□ -1.87
GARNL3-219ENST00000495172 HERVK_113P61574 105 aa3.36□□□□□ -1.87
GARNL3-219ENST00000495172 KRTAP20-2Q3LI61 65 aa3.36□□□□□ -1.87
GARNL3-219ENST00000495172 S4R3F8 94 aa3.36□□□□□ -1.87
GARNL3-219ENST00000495172 C8orf87E5RJ46 101 aa3.35□□□□□ -1.87
GARNL3-219ENST00000495172 LOC105371267A0A1B0GV96 52 aa3.34□□□□□ -1.87
GARNL3-219ENST00000495172 E9PLD3 99 aa3.34□□□□□ -1.87
GARNL3-219ENST00000495172 PYY3Q5JQD4 70 aa3.34□□□□□ -1.87
GARNL3-219ENST00000495172 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
GARNL3-219ENST00000495172 PLAC4Q8WY50 150 aa3.34□□□□□ -1.87
GARNL3-219ENST00000495172 HSBP1L1C9JCN9 74 aa3.33□□□□□ -1.88
GARNL3-219ENST00000495172 CRIPTQ9P021 101 aa3.33□□□□□ -1.88
GARNL3-219ENST00000495172 A0A1B0GV72 72 aa3.32□□□□□ -1.88
GARNL3-219ENST00000495172 TIMM17BO60830 172 aa3.32□□□□□ -1.88
GARNL3-219ENST00000495172 KRTAP19-7Q3SYF9 63 aa3.32□□□□□ -1.88
GARNL3-219ENST00000495172 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.32□□□□□ -1.88
GARNL3-219ENST00000495172 H0YAA0 97 aa3.31□□□□□ -1.88
GARNL3-219ENST00000495172 MT1EP04732 61 aa3.31□□□□□ -1.88
GARNL3-219ENST00000495172 SPATA45Q537H7 98 aa3.31□□□□□ -1.88
GARNL3-219ENST00000495172 VAMP8Q9BV40 100 aa3.31□□□□□ -1.88
GARNL3-219ENST00000495172 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
GARNL3-219ENST00000495172 NDUFV3P56181 108 aaKnown RBP3.3□□□□□ -1.88
GARNL3-219ENST00000495172 RAB37Q96AX2 223 aa3.3□□□□□ -1.88
GARNL3-219ENST00000495172 DSCR8Q96T75 97 aa3.3□□□□□ -1.88
GARNL3-219ENST00000495172 COX8AP10176 69 aa3.29□□□□□ -1.88
GARNL3-219ENST00000495172 VAMP3Q15836 100 aa3.29□□□□□ -1.88
GARNL3-219ENST00000495172 C14orf144Q96I85 54 aa3.29□□□□□ -1.88
GARNL3-219ENST00000495172 H3BMG7 143 aa3.28□□□□□ -1.88
GARNL3-219ENST00000495172 SMIM6P0DI80 62 aa3.28□□□□□ -1.88
GARNL3-219ENST00000495172 SCGB1D4Q6XE38 83 aa3.28□□□□□ -1.88
GARNL3-219ENST00000495172 MUSTN1Q8IVN3 82 aa3.28□□□□□ -1.88
GARNL3-219ENST00000495172 DLEU1O43261 78 aa3.27□□□□□ -1.89
GARNL3-219ENST00000495172 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
GARNL3-219ENST00000495172 PPDPFLQ8WWR9 84 aa3.27□□□□□ -1.89
GARNL3-219ENST00000495172 A8MUN3 132 aa3.26□□□□□ -1.89
GARNL3-219ENST00000495172 C12orf57Q99622 126 aa3.26□□□□□ -1.89
GARNL3-219ENST00000495172 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
GARNL3-219ENST00000495172 C2orf91Q6ZV80 131 aa3.25□□□□□ -1.89
GARNL3-219ENST00000495172 UQCR10Q9UDW1 63 aa3.25□□□□□ -1.89
GARNL3-219ENST00000495172 IFITM1P13164 125 aa3.24□□□□□ -1.89
GARNL3-219ENST00000495172 PDE6GP18545 87 aa3.24□□□□□ -1.89
GARNL3-219ENST00000495172 HIGD1BQ9P298 99 aa3.24□□□□□ -1.89
GARNL3-219ENST00000495172 HIST1H4GQ99525 98 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms