RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 DEFB105AQ8NG35 78 aa1.7□□□□□ -2.14
MDC1-208ENST00000494654 A0A087WSZ3 146 aa1.69□□□□□ -2.14
MDC1-208ENST00000494654 A0A096LPF7 62 aa1.69□□□□□ -2.14
MDC1-208ENST00000494654 IGKV2-24A0A0C4DH68 120 aa1.69□□□□□ -2.14
MDC1-208ENST00000494654 DEFB130BP0DP73 79 aa1.69□□□□□ -2.14
MDC1-208ENST00000494654 DEFB130AP0DP74 79 aa1.69□□□□□ -2.14
MDC1-208ENST00000494654 PCOTHQ58A44 107 aa1.69□□□□□ -2.14
MDC1-208ENST00000494654 SPRR1BP22528 89 aa1.68□□□□□ -2.14
MDC1-208ENST00000494654 RPL37AP61513 92 aaKnown RBP1.68□□□□□ -2.14
MDC1-208ENST00000494654 DEFB116Q30KQ4 102 aa1.68□□□□□ -2.14
MDC1-208ENST00000494654 LINC00472Q9H8W2 130 aa1.68□□□□□ -2.14
MDC1-208ENST00000494654 PRKDCP78527 4128 aaKnown RBP1.68□□□□□ -2.14
MDC1-208ENST00000494654 KMT2CQ8NEZ4 4911 aaKnown RBP1.68□□□□□ -2.14
MDC1-208ENST00000494654 CMYA5Q8N3K9 4069 aa1.68□□□□□ -2.14
MDC1-208ENST00000494654 DNAH8Q96JB1 4490 aa1.68□□□□□ -2.14
MDC1-208ENST00000494654 KRTAP5-3Q6L8H2 238 aa1.67□□□□□ -2.14
MDC1-208ENST00000494654 CSAG1Q6PB30 78 aa1.67□□□□□ -2.14
MDC1-208ENST00000494654 REG3GQ6UW15 175 aa1.67□□□□□ -2.14
MDC1-208ENST00000494654 DMAC1Q96GE9 116 aa1.67□□□□□ -2.14
MDC1-208ENST00000494654 C8orf17Q9NRJ1 99 aa1.67□□□□□ -2.14
MDC1-208ENST00000494654 EPPK1P58107 5090 aaKnown RBP1.67□□□□□ -2.14
MDC1-208ENST00000494654 VWFP04275 2813 aa1.67□□□□□ -2.14
MDC1-208ENST00000494654 TENM2Q9NT68 2774 aa1.66□□□□□ -2.14
MDC1-208ENST00000494654 A0A1B0GU69 56 aa1.66□□□□□ -2.14
MDC1-208ENST00000494654 H3BNG1 76 aa1.66□□□□□ -2.14
MDC1-208ENST00000494654 UQCR11O14957 56 aa1.66□□□□□ -2.14
MDC1-208ENST00000494654 ACYP2P14621 99 aa1.66□□□□□ -2.14
MDC1-208ENST00000494654 MIR22HGQ0VDD5 57 aa1.66□□□□□ -2.14
MDC1-208ENST00000494654 NOTCH2NLQ7Z3S9 236 aa1.66□□□□□ -2.14
MDC1-208ENST00000494654 Q96NJ1 140 aa1.66□□□□□ -2.14
MDC1-208ENST00000494654 ZNF706Q9Y5V0 76 aaPredicted RBP1.66□□□□□ -2.14
MDC1-208ENST00000494654 DYNC2H1Q8NCM8 4307 aaKnown RBP1.66□□□□□ -2.14
MDC1-208ENST00000494654 DNAH9Q9NYC9 4486 aa1.66□□□□□ -2.14
MDC1-208ENST00000494654 IGHV6-1A0A0B4J1U7 121 aa1.65□□□□□ -2.15
MDC1-208ENST00000494654 A0A1B0GVX0 72 aa1.65□□□□□ -2.15
MDC1-208ENST00000494654 FAM168BA1KXE4 195 aa1.65□□□□□ -2.15
MDC1-208ENST00000494654 ZNF861PO60384 105 aa1.65□□□□□ -2.15
MDC1-208ENST00000494654 ROMO1P60602 79 aa1.65□□□□□ -2.15
MDC1-208ENST00000494654 KRTAP13-3Q3SY46 172 aa1.65□□□□□ -2.15
MDC1-208ENST00000494654 LINC01556Q5JQF7 62 aa1.65□□□□□ -2.15
MDC1-208ENST00000494654 C1orf134Q5TEV5 83 aa1.65□□□□□ -2.15
MDC1-208ENST00000494654 KRTAP7-1Q8IUC3 87 aa1.65□□□□□ -2.15
MDC1-208ENST00000494654 MRPL34Q9BQ48 92 aaKnown RBP1.65□□□□□ -2.15
MDC1-208ENST00000494654 HUWE1Q7Z6Z7 4374 aaKnown RBP1.65□□□□□ -2.15
MDC1-208ENST00000494654 DNAH17Q9UFH2 4485 aa1.64□□□□□ -2.15
MDC1-208ENST00000494654 FRAS1Q86XX4 4008 aa1.64□□□□□ -2.15
MDC1-208ENST00000494654 SPART-AS1P0CW21 52 aa1.64□□□□□ -2.15
MDC1-208ENST00000494654 KRTAP25-1Q3LHN0 102 aa1.64□□□□□ -2.15
MDC1-208ENST00000494654 HYDINQ4G0P3 5121 aa1.64□□□□□ -2.15
MDC1-208ENST00000494654 DNAH7Q8WXX0 4024 aa1.64□□□□□ -2.15
MDC1-208ENST00000494654 BIRC6Q9NR09 4857 aa1.64□□□□□ -2.15
MDC1-208ENST00000494654 A0A0G2JQZ4 141 aa1.63□□□□□ -2.15
MDC1-208ENST00000494654 A0A1W2PNN7 141 aa1.63□□□□□ -2.15
MDC1-208ENST00000494654 PRLHP81277 87 aa1.63□□□□□ -2.15
MDC1-208ENST00000494654 DEFB135Q30KP9 77 aa1.63□□□□□ -2.15
MDC1-208ENST00000494654 CSMD3Q7Z407 3707 aa1.63□□□□□ -2.15
MDC1-208ENST00000494654 DNAH10Q8IVF4 4471 aa1.63□□□□□ -2.15
MDC1-208ENST00000494654 DNAH3Q8TD57 4116 aa1.62□□□□□ -2.15
MDC1-208ENST00000494654 A8MUU9 505 aa1.62□□□□□ -2.15
MDC1-208ENST00000494654 IGLV7-43P04211 117 aa1.62□□□□□ -2.15
MDC1-208ENST00000494654 HTN3P15516 51 aa1.62□□□□□ -2.15
MDC1-208ENST00000494654 KRTAP10-3P60369 221 aa1.62□□□□□ -2.15
MDC1-208ENST00000494654 PCLOQ9Y6V0 5065 aa1.61□□□□□ -2.15
MDC1-208ENST00000494654 IGLV5-52A0A0A0MRZ9 124 aa1.61□□□□□ -2.15
MDC1-208ENST00000494654 LY6G6CO95867 125 aa1.61□□□□□ -2.15
MDC1-208ENST00000494654 DNAH10OSP0CZ25 163 aa1.61□□□□□ -2.15
MDC1-208ENST00000494654 DNAH6Q9C0G6 4158 aa1.61□□□□□ -2.15
MDC1-208ENST00000494654 DEFB4AO15263 64 aa1.6□□□□□ -2.15
MDC1-208ENST00000494654 CDK2AP2O75956 126 aa1.6□□□□□ -2.15
MDC1-208ENST00000494654 LINC00483Q53H64 154 aa1.6□□□□□ -2.15
MDC1-208ENST00000494654 Q5W150 140 aa1.6□□□□□ -2.15
MDC1-208ENST00000494654 RYR2Q92736 4967 aa1.6□□□□□ -2.15
MDC1-208ENST00000494654 COL7A1Q02388 2944 aa1.6□□□□□ -2.15
MDC1-208ENST00000494654 DNAH2Q9P225 4427 aa1.59□□□□□ -2.15
MDC1-208ENST00000494654 A0A096LNI7 61 aa1.59□□□□□ -2.15
MDC1-208ENST00000494654 IGKV2-30P06310 120 aa1.59□□□□□ -2.15
MDC1-208ENST00000494654 P0C880 135 aa1.59□□□□□ -2.15
MDC1-208ENST00000494654 CHTF8P0CG12 524 aa1.59□□□□□ -2.15
MDC1-208ENST00000494654 LCE1AQ5T7P2 110 aa1.59□□□□□ -2.15
MDC1-208ENST00000494654 KRTAP13-1Q8IUC0 172 aa1.59□□□□□ -2.15
MDC1-208ENST00000494654 ANAPC11Q9NYG5 84 aa1.59□□□□□ -2.15
MDC1-208ENST00000494654 A0A0A0MQY5 61 aa1.58□□□□□ -2.16
MDC1-208ENST00000494654 K7EIL1 84 aa1.58□□□□□ -2.16
MDC1-208ENST00000494654 KRTAP10-11P60412 298 aa1.58□□□□□ -2.16
MDC1-208ENST00000494654 DNAH11Q96DT5 4516 aa1.58□□□□□ -2.16
MDC1-208ENST00000494654 TENM3Q9P273 2699 aa1.58□□□□□ -2.16
MDC1-208ENST00000494654 LYSTQ99698 3801 aa1.57□□□□□ -2.16
MDC1-208ENST00000494654 SACSQ9NZJ4 4579 aa1.57□□□□□ -2.16
MDC1-208ENST00000494654 IGKV2D-30A0A075B6S6 120 aa1.57□□□□□ -2.16
MDC1-208ENST00000494654 NUPR2A6NF83 97 aa1.57□□□□□ -2.16
MDC1-208ENST00000494654 H0YAA0 97 aa1.57□□□□□ -2.16
MDC1-208ENST00000494654 CASC10Q5T4H9 136 aa1.57□□□□□ -2.16
MDC1-208ENST00000494654 LINC00304Q8N9R0 145 aa1.57□□□□□ -2.16
MDC1-208ENST00000494654 KRTAP9-8Q9BYQ0 159 aa1.57□□□□□ -2.16
MDC1-208ENST00000494654 C14orf177Q52M58 125 aa1.56□□□□□ -2.16
MDC1-208ENST00000494654 RYR1P21817 5038 aa1.55□□□□□ -2.16
MDC1-208ENST00000494654 A0A087WTM6 91 aa1.55□□□□□ -2.16
MDC1-208ENST00000494654 IGLV9-49A0A0B4J1Y8 123 aa1.55□□□□□ -2.16
MDC1-208ENST00000494654 KRTAP11-1Q8IUC1 163 aa1.55□□□□□ -2.16
MDC1-208ENST00000494654 C20orf166-AS1Q96NR2 134 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms