RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 Q8NDZ9 215 aa4.55□□□□□ -1.68
SMARCE1-211ENST00000493660 TNP2Q05952 138 aa4.55□□□□□ -1.68
SMARCE1-211ENST00000493660 A0A096LNI7 61 aa4.54□□□□□ -1.68
SMARCE1-211ENST00000493660 SACSQ9NZJ4 4579 aa4.54□□□□□ -1.68
SMARCE1-211ENST00000493660 SPINK7P58062 85 aa4.53□□□□□ -1.68
SMARCE1-211ENST00000493660 FRAS1Q86XX4 4008 aa4.53□□□□□ -1.68
SMARCE1-211ENST00000493660 IGLV5-52A0A0A0MRZ9 124 aa4.53□□□□□ -1.68
SMARCE1-211ENST00000493660 ADM2Q7Z4H4 148 aa4.52□□□□□ -1.69
SMARCE1-211ENST00000493660 IGHV6-1A0A0B4J1U7 121 aa4.51□□□□□ -1.69
SMARCE1-211ENST00000493660 IGKV2-24A0A0C4DH68 120 aa4.51□□□□□ -1.69
SMARCE1-211ENST00000493660 KRTAP7-1Q8IUC3 87 aa4.51□□□□□ -1.69
SMARCE1-211ENST00000493660 SPACA4Q8TDM5 124 aa4.51□□□□□ -1.69
SMARCE1-211ENST00000493660 C7orf33Q8WU49 177 aa4.51□□□□□ -1.69
SMARCE1-211ENST00000493660 IGLV7-46A0A075B6I9 117 aa4.5□□□□□ -1.69
SMARCE1-211ENST00000493660 FAM168BA1KXE4 195 aa4.5□□□□□ -1.69
SMARCE1-211ENST00000493660 KRTAP9-8Q9BYQ0 159 aa4.5□□□□□ -1.69
SMARCE1-211ENST00000493660 HYDINQ4G0P3 5121 aa4.5□□□□□ -1.69
SMARCE1-211ENST00000493660 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
SMARCE1-211ENST00000493660 A0A1W2PNM2 257 aa4.49□□□□□ -1.69
SMARCE1-211ENST00000493660 DSCR10P59022 87 aa4.49□□□□□ -1.69
SMARCE1-211ENST00000493660 IGLV1-50A0A075B6I6 118 aa4.49□□□□□ -1.69
SMARCE1-211ENST00000493660 A0A1W2PNN7 141 aa4.49□□□□□ -1.69
SMARCE1-211ENST00000493660 H0Y9P7 68 aa4.49□□□□□ -1.69
SMARCE1-211ENST00000493660 CHTF8P0CG12 524 aa4.49□□□□□ -1.69
SMARCE1-211ENST00000493660 DNAH11Q96DT5 4516 aa4.48□□□□□ -1.69
SMARCE1-211ENST00000493660 KRTAP10-2P60368 255 aa4.48□□□□□ -1.69
SMARCE1-211ENST00000493660 FAT2Q9NYQ8 4349 aa4.48□□□□□ -1.69
SMARCE1-211ENST00000493660 IGLV5-48A0A075B6I7 105 aa4.48□□□□□ -1.69
SMARCE1-211ENST00000493660 K7EQZ3 153 aa4.48□□□□□ -1.69
SMARCE1-211ENST00000493660 SPAG11AQ6PDA7 123 aa4.48□□□□□ -1.69
SMARCE1-211ENST00000493660 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.48□□□□□ -1.69
SMARCE1-211ENST00000493660 HECTD4Q9Y4D8 3996 aa4.47□□□□□ -1.69
SMARCE1-211ENST00000493660 SPRR1AP35321 89 aa4.47□□□□□ -1.69
SMARCE1-211ENST00000493660 PANO1I0J062 215 aa4.47□□□□□ -1.69
SMARCE1-211ENST00000493660 DNAH8Q96JB1 4490 aa4.46□□□□□ -1.69
SMARCE1-211ENST00000493660 A0A1B0GVY2 172 aa4.46□□□□□ -1.7
SMARCE1-211ENST00000493660 Q6ZSA8 131 aa4.46□□□□□ -1.7
SMARCE1-211ENST00000493660 RPL37AP8A6NKH3 93 aa4.45□□□□□ -1.7
SMARCE1-211ENST00000493660 KRTAP4-16G5E9R7 235 aaPredicted RBP4.45□□□□□ -1.7
SMARCE1-211ENST00000493660 REG3GQ6UW15 175 aa4.45□□□□□ -1.7
SMARCE1-211ENST00000493660 LINC00528Q8N1L1 170 aa4.45□□□□□ -1.7
SMARCE1-211ENST00000493660 SPRR4Q96PI1 79 aa4.45□□□□□ -1.7
SMARCE1-211ENST00000493660 PKD1P98161 4303 aa4.45□□□□□ -1.7
SMARCE1-211ENST00000493660 DNAH5Q8TE73 4624 aa4.45□□□□□ -1.7
SMARCE1-211ENST00000493660 RYR2Q92736 4967 aa4.45□□□□□ -1.7
SMARCE1-211ENST00000493660 CSAG1Q6PB30 78 aa4.44□□□□□ -1.7
SMARCE1-211ENST00000493660 NOTCH2NLQ7Z3S9 236 aa4.44□□□□□ -1.7
SMARCE1-211ENST00000493660 Q8NBF4 154 aa4.44□□□□□ -1.7
SMARCE1-211ENST00000493660 KRTAP10-1P60331 282 aa4.43□□□□□ -1.7
SMARCE1-211ENST00000493660 Q6ZRX8 168 aa4.43□□□□□ -1.7
SMARCE1-211ENST00000493660 DHRS4-AS1Q9P1J3 65 aa4.43□□□□□ -1.7
SMARCE1-211ENST00000493660 KRTAP29-1A8MX34 341 aaPredicted RBP4.42□□□□□ -1.7
SMARCE1-211ENST00000493660 SPATA8Q6RVD6 105 aa4.41□□□□□ -1.7
SMARCE1-211ENST00000493660 ROMO1P60602 79 aa4.41□□□□□ -1.7
SMARCE1-211ENST00000493660 WFDC13Q8IUB5 93 aa4.41□□□□□ -1.7
SMARCE1-211ENST00000493660 CIRBP-AS1Q8TBR5 109 aa4.41□□□□□ -1.7
SMARCE1-211ENST00000493660 C1orf137Q5JT78 98 aa4.4□□□□□ -1.71
SMARCE1-211ENST00000493660 KRTAP11-1Q8IUC1 163 aa4.4□□□□□ -1.71
SMARCE1-211ENST00000493660 Q8N377 158 aa4.39□□□□□ -1.71
SMARCE1-211ENST00000493660 KRTAP4-5Q9BYR2 181 aa4.39□□□□□ -1.71
SMARCE1-211ENST00000493660 KRTAP13-1Q8IUC0 172 aa4.38□□□□□ -1.71
SMARCE1-211ENST00000493660 PSORS1C2Q9UIG4 136 aa4.38□□□□□ -1.71
SMARCE1-211ENST00000493660 KMT2CQ8NEZ4 4911 aaKnown RBP4.38□□□□□ -1.71
SMARCE1-211ENST00000493660 HRES1P13985 223 aa4.37□□□□□ -1.71
SMARCE1-211ENST00000493660 PRLHP81277 87 aa4.37□□□□□ -1.71
SMARCE1-211ENST00000493660 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
SMARCE1-211ENST00000493660 DYNC1H1Q14204 4646 aaKnown RBP4.36□□□□□ -1.71
SMARCE1-211ENST00000493660 DEFB116Q30KQ4 102 aa4.36□□□□□ -1.71
SMARCE1-211ENST00000493660 ZNF861PO60384 105 aa4.34□□□□□ -1.71
SMARCE1-211ENST00000493660 IGLV7-43P04211 117 aa4.34□□□□□ -1.71
SMARCE1-211ENST00000493660 DEFB105AQ8NG35 78 aa4.34□□□□□ -1.71
SMARCE1-211ENST00000493660 LRP1BQ9NZR2 4599 aa4.34□□□□□ -1.71
SMARCE1-211ENST00000493660 SPRR1BP22528 89 aa4.34□□□□□ -1.72
SMARCE1-211ENST00000493660 MIR22HGQ0VDD5 57 aa4.33□□□□□ -1.72
SMARCE1-211ENST00000493660 PCOTHQ58A44 107 aa4.32□□□□□ -1.72
SMARCE1-211ENST00000493660 TP53AIP1Q9HCN2 124 aa4.32□□□□□ -1.72
SMARCE1-211ENST00000493660 A8MWP4 228 aa4.31□□□□□ -1.72
SMARCE1-211ENST00000493660 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
SMARCE1-211ENST00000493660 LINC00483Q53H64 154 aa4.31□□□□□ -1.72
SMARCE1-211ENST00000493660 RYR3Q15413 4870 aa4.31□□□□□ -1.72
SMARCE1-211ENST00000493660 PKHD1P08F94 4074 aa4.3□□□□□ -1.72
SMARCE1-211ENST00000493660 CDK2AP2O75956 126 aa4.3□□□□□ -1.72
SMARCE1-211ENST00000493660 RPL37AP61513 92 aaKnown RBP4.3□□□□□ -1.72
SMARCE1-211ENST00000493660 APOBP04114 4563 aaKnown RBP4.3□□□□□ -1.72
SMARCE1-211ENST00000493660 UQCR11O14957 56 aa4.3□□□□□ -1.72
SMARCE1-211ENST00000493660 IGLV8-61A0A075B6I0 122 aa4.29□□□□□ -1.72
SMARCE1-211ENST00000493660 A0A1B0GU69 56 aa4.29□□□□□ -1.72
SMARCE1-211ENST00000493660 SPINK6Q6UWN8 80 aa4.27□□□□□ -1.73
SMARCE1-211ENST00000493660 P0C880 135 aa4.26□□□□□ -1.73
SMARCE1-211ENST00000493660 SMR3BP02814 79 aaPredicted RBP4.25□□□□□ -1.73
SMARCE1-211ENST00000493660 KRTAP10-4P60372 401 aaPredicted RBP4.25□□□□□ -1.73
SMARCE1-211ENST00000493660 MMP24-AS1A0A0U1RRL7 71 aa4.25□□□□□ -1.73
SMARCE1-211ENST00000493660 FAM229AH3BQW9 127 aa4.25□□□□□ -1.73
SMARCE1-211ENST00000493660 ACYP2P14621 99 aa4.25□□□□□ -1.73
SMARCE1-211ENST00000493660 IGFL1Q6UW32 110 aa4.24□□□□□ -1.73
SMARCE1-211ENST00000493660 A0A087WSZ3 146 aa4.24□□□□□ -1.73
SMARCE1-211ENST00000493660 PKHD1L1Q86WI1 4243 aa4.23□□□□□ -1.73
SMARCE1-211ENST00000493660 KRTAP16-1A8MUX0 517 aa4.23□□□□□ -1.73
SMARCE1-211ENST00000493660 VPS13BQ7Z7G8 4022 aa4.22□□□□□ -1.73
SMARCE1-211ENST00000493660 KRTAP1-4P0C5Y4 121 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms