RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 KRTAP10-4P60372 401 aaPredicted RBP8.15□□□□□ -1.1
PTPN7-216ENST00000492977 TYMSOSQ8TAI1 123 aa8.15□□□□□ -1.1
PTPN7-216ENST00000492977 CYSTM1Q9H1C7 97 aa8.15□□□□□ -1.1
PTPN7-216ENST00000492977 DYNC1H1Q14204 4646 aaKnown RBP8.14□□□□□ -1.11
PTPN7-216ENST00000492977 KMT2CQ8NEZ4 4911 aaKnown RBP8.14□□□□□ -1.11
PTPN7-216ENST00000492977 TMEM254Q8TBM7 123 aa8.14□□□□□ -1.11
PTPN7-216ENST00000492977 C8orf17Q9NRJ1 99 aa8.13□□□□□ -1.11
PTPN7-216ENST00000492977 hDV103S1A0JD37 113 aa8.12□□□□□ -1.11
PTPN7-216ENST00000492977 LIMD2Q9BT23 127 aa8.12□□□□□ -1.11
PTPN7-216ENST00000492977 IGHV6-1A0A0B4J1U7 121 aa8.11□□□□□ -1.11
PTPN7-216ENST00000492977 C5orf47Q569G3 176 aa8.11□□□□□ -1.11
PTPN7-216ENST00000492977 SNURFQ9Y675 71 aa8.1□□□□□ -1.11
PTPN7-216ENST00000492977 A0A0U1RQV1 116 aa8.1□□□□□ -1.11
PTPN7-216ENST00000492977 SPINK1P00995 79 aa8.1□□□□□ -1.11
PTPN7-216ENST00000492977 NDUFC1O43677 76 aa8.09□□□□□ -1.11
PTPN7-216ENST00000492977 C1orf195Q5TG92 126 aa8.08□□□□□ -1.12
PTPN7-216ENST00000492977 PRR26Q8N8Z3 221 aa8.08□□□□□ -1.12
PTPN7-216ENST00000492977 H7BZZ5 65 aa8.06□□□□□ -1.12
PTPN7-216ENST00000492977 SPAG11AQ6PDA7 123 aa8.06□□□□□ -1.12
PTPN7-216ENST00000492977 APOBP04114 4563 aaKnown RBP8.06□□□□□ -1.12
PTPN7-216ENST00000492977 RPS29P62273 56 aaKnown RBP8.05□□□□□ -1.12
PTPN7-216ENST00000492977 C8orf87E5RJ46 101 aa8.05□□□□□ -1.12
PTPN7-216ENST00000492977 LINC00304Q8N9R0 145 aa8.05□□□□□ -1.12
PTPN7-216ENST00000492977 TP53AIP1Q9HCN2 124 aa8.04□□□□□ -1.12
PTPN7-216ENST00000492977 MP68P56378 58 aa8.03□□□□□ -1.12
PTPN7-216ENST00000492977 NOTCH2NLQ7Z3S9 236 aa8.03□□□□□ -1.12
PTPN7-216ENST00000492977 MRPL34Q9BQ48 92 aaKnown RBP8.03□□□□□ -1.12
PTPN7-216ENST00000492977 FAM236DA0A1B0GTK5 79 aa8.01□□□□□ -1.13
PTPN7-216ENST00000492977 FAM236CP0DP71 79 aa8.01□□□□□ -1.13
PTPN7-216ENST00000492977 ZCCHC13Q8WW36 166 aaKnown RBP8.01□□□□□ -1.13
PTPN7-216ENST00000492977 H3BPC8 53 aa8.01□□□□□ -1.13
PTPN7-216ENST00000492977 SERP1Q9Y6X1 66 aa7.99□□□□□ -1.13
PTPN7-216ENST00000492977 H0Y9P7 68 aa7.98□□□□□ -1.13
PTPN7-216ENST00000492977 ATP5EP56381 51 aaPredicted RBP7.98□□□□□ -1.13
PTPN7-216ENST00000492977 LINC00313P59037 77 aa7.98□□□□□ -1.13
PTPN7-216ENST00000492977 RYR3Q15413 4870 aa7.98□□□□□ -1.13
PTPN7-216ENST00000492977 TRAV22A0A0B4J277 110 aa7.97□□□□□ -1.13
PTPN7-216ENST00000492977 NDUFS5O43920 106 aa7.97□□□□□ -1.13
PTPN7-216ENST00000492977 Q5VSD8 79 aa7.96□□□□□ -1.14
PTPN7-216ENST00000492977 LINC00208Q96KT6 92 aa7.95□□□□□ -1.14
PTPN7-216ENST00000492977 OXTP01178 125 aa7.93□□□□□ -1.14
PTPN7-216ENST00000492977 FAT1Q14517 4588 aa7.93□□□□□ -1.14
PTPN7-216ENST00000492977 C1orf64Q8NEQ6 169 aa7.92□□□□□ -1.14
PTPN7-216ENST00000492977 XP32Q5T750 250 aa7.91□□□□□ -1.14
PTPN7-216ENST00000492977 Q8N9P0 234 aaPredicted RBP7.9□□□□□ -1.14
PTPN7-216ENST00000492977 PKHD1L1Q86WI1 4243 aa7.9□□□□□ -1.14
PTPN7-216ENST00000492977 KRTAP16-1A8MUX0 517 aa7.88□□□□□ -1.15
PTPN7-216ENST00000492977 SMIM26A0A096LP01 95 aa7.87□□□□□ -1.15
PTPN7-216ENST00000492977 KRTAP10-8P60410 259 aa7.86□□□□□ -1.15
PTPN7-216ENST00000492977 KRTAP19-4Q3LI73 84 aa7.85□□□□□ -1.15
PTPN7-216ENST00000492977 KRTAP3-1Q9BYR8 98 aa7.85□□□□□ -1.15
PTPN7-216ENST00000492977 HSPG2P98160 4391 aa7.85□□□□□ -1.15
PTPN7-216ENST00000492977 C4orf26Q17RF5 130 aa7.84□□□□□ -1.15
PTPN7-216ENST00000492977 KRTAP13-3Q3SY46 172 aa7.84□□□□□ -1.15
PTPN7-216ENST00000492977 Q8N1X5 172 aa7.84□□□□□ -1.15
PTPN7-216ENST00000492977 Q5W150 140 aa7.83□□□□□ -1.16
PTPN7-216ENST00000492977 LOC101927531A0A1B0GV80 90 aa7.81□□□□□ -1.16
PTPN7-216ENST00000492977 SPANXA2-OT1Q8N9U9 137 aa7.81□□□□□ -1.16
PTPN7-216ENST00000492977 KRTAP17-1Q9BYP8 105 aa7.81□□□□□ -1.16
PTPN7-216ENST00000492977 RYR1P21817 5038 aa7.81□□□□□ -1.16
PTPN7-216ENST00000492977 CYP4F30PQ9H0H9 118 aa7.79□□□□□ -1.16
PTPN7-216ENST00000492977 FLG2Q5D862 2391 aaPredicted RBP7.76□□□□□ -1.17
PTPN7-216ENST00000492977 PRO0628Q9UI54 55 aa7.76□□□□□ -1.17
PTPN7-216ENST00000492977 A0A0A0MQY5 61 aa7.75□□□□□ -1.17
PTPN7-216ENST00000492977 PCOTHQ58A44 107 aa7.75□□□□□ -1.17
PTPN7-216ENST00000492977 IGLV7-46A0A075B6I9 117 aa7.74□□□□□ -1.17
PTPN7-216ENST00000492977 RETNLBQ9BQ08 111 aa7.74□□□□□ -1.17
PTPN7-216ENST00000492977 PRR4Q16378 134 aa7.72□□□□□ -1.17
PTPN7-216ENST00000492977 FP248Q71RG6 208 aaPredicted RBP7.71□□□□□ -1.18
PTPN7-216ENST00000492977 C9orf92A6NGG3 77 aa7.7□□□□□ -1.18
PTPN7-216ENST00000492977 IGKV2-30P06310 120 aa7.7□□□□□ -1.18
PTPN7-216ENST00000492977 C20orf166-AS1Q96NR2 134 aa7.7□□□□□ -1.18
PTPN7-216ENST00000492977 TNXBP22105 4242 aa7.7□□□□□ -1.18
PTPN7-216ENST00000492977 A8MUU9 505 aa7.69□□□□□ -1.18
PTPN7-216ENST00000492977 EPPK1P58107 5090 aaKnown RBP7.69□□□□□ -1.18
PTPN7-216ENST00000492977 MT1HL1P0DM35 61 aa7.68□□□□□ -1.18
PTPN7-216ENST00000492977 KIAA1109Q2LD37 5005 aa7.68□□□□□ -1.18
PTPN7-216ENST00000492977 LRP1Q07954 4544 aaKnown RBP7.65□□□□□ -1.18
PTPN7-216ENST00000492977 DMBT1Q9UGM3 2413 aaPredicted RBP7.61□□□□□ -1.19
PTPN7-216ENST00000492977 FAT3Q8TDW7 4589 aa7.61□□□□□ -1.19
PTPN7-216ENST00000492977 IGKV2D-30A0A075B6S6 120 aa7.61□□□□□ -1.19
PTPN7-216ENST00000492977 HRES1P13985 223 aa7.61□□□□□ -1.19
PTPN7-216ENST00000492977 Q75L30 129 aa7.61□□□□□ -1.19
PTPN7-216ENST00000492977 BIRC6Q9NR09 4857 aa7.59□□□□□ -1.2
PTPN7-216ENST00000492977 C7orf65Q6ZTY9 151 aa7.59□□□□□ -1.2
PTPN7-216ENST00000492977 KRTAP4-5Q9BYR2 181 aa7.57□□□□□ -1.2
PTPN7-216ENST00000492977 COA5Q86WW8 74 aa7.56□□□□□ -1.2
PTPN7-216ENST00000492977 BRK1Q8WUW1 75 aa7.54□□□□□ -1.2
PTPN7-216ENST00000492977 DMAC1Q96GE9 116 aa7.54□□□□□ -1.2
PTPN7-216ENST00000492977 ACYP2P14621 99 aa7.54□□□□□ -1.2
PTPN7-216ENST00000492977 Q1T7F1 81 aa7.54□□□□□ -1.2
PTPN7-216ENST00000492977 MPLKIPQ8TAP9 179 aa7.54□□□□□ -1.2
PTPN7-216ENST00000492977 V9GYY9 64 aa7.52□□□□□ -1.21
PTPN7-216ENST00000492977 ATP11AUNQ6ZP68 121 aa7.49□□□□□ -1.21
PTPN7-216ENST00000492977 MYCBP2O75592 4640 aa7.48□□□□□ -1.21
PTPN7-216ENST00000492977 RPL37P61927 97 aaKnown RBP7.48□□□□□ -1.21
PTPN7-216ENST00000492977 LOC100996750A0A140TA64 210 aa7.46□□□□□ -1.21
PTPN7-216ENST00000492977 SPINK7P58062 85 aa7.46□□□□□ -1.21
PTPN7-216ENST00000492977 KRTAP4-6Q9BYQ5 205 aa7.46□□□□□ -1.21
PTPN7-216ENST00000492977 TPRXLQ17RH7 258 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms