RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 OBSCN-AS1Q96MR7 158 aa4.02□□□□□ -1.77
TPR-208ENST00000492973 LAMTOR3Q9UHA4 124 aa4.02□□□□□ -1.77
TPR-208ENST00000492973 ZNF706Q9Y5V0 76 aaPredicted RBP4.02□□□□□ -1.77
TPR-208ENST00000492973 JMJD7-PLA2G4BH0Y9G9 81 aa4□□□□□ -1.77
TPR-208ENST00000492973 RBM3P98179 157 aaKnown RBP4□□□□□ -1.77
TPR-208ENST00000492973 FAM229BQ4G0N7 80 aa4□□□□□ -1.77
TPR-208ENST00000492973 KRTAP13-2Q52LG2 175 aa4□□□□□ -1.77
TPR-208ENST00000492973 Q6ZVQ6 151 aa4□□□□□ -1.77
TPR-208ENST00000492973 IGLV8-61A0A075B6I0 122 aa3.99□□□□□ -1.77
TPR-208ENST00000492973 TRBV7-4A0A0J9YYF1 115 aa3.98□□□□□ -1.77
TPR-208ENST00000492973 A0A1B0GV72 72 aa3.98□□□□□ -1.77
TPR-208ENST00000492973 CRYGAP11844 174 aa3.98□□□□□ -1.77
TPR-208ENST00000492973 OCR1Q9BZK8 76 aa3.98□□□□□ -1.77
TPR-208ENST00000492973 C14orf132Q9NPU4 83 aa3.98□□□□□ -1.77
TPR-208ENST00000492973 LOC110117498A0A087WWA1 95 aa3.97□□□□□ -1.77
TPR-208ENST00000492973 DSCR8Q96T75 97 aa3.97□□□□□ -1.77
TPR-208ENST00000492973 A0A0G2JQZ4 141 aa3.96□□□□□ -1.78
TPR-208ENST00000492973 F8WEM9 126 aa3.96□□□□□ -1.78
TPR-208ENST00000492973 PDE6GP18545 87 aa3.96□□□□□ -1.78
TPR-208ENST00000492973 IGFL1Q6UW32 110 aa3.96□□□□□ -1.78
TPR-208ENST00000492973 Q6ZQT0 140 aa3.96□□□□□ -1.78
TPR-208ENST00000492973 SSBP3-AS1Q7Z2R9 100 aa3.96□□□□□ -1.78
TPR-208ENST00000492973 A0A1W2PNM2 257 aa3.95□□□□□ -1.78
TPR-208ENST00000492973 CCKP06307 115 aa3.95□□□□□ -1.78
TPR-208ENST00000492973 Q6JHZ5 121 aa3.95□□□□□ -1.78
TPR-208ENST00000492973 TYMSOSQ8TAI1 123 aa3.95□□□□□ -1.78
TPR-208ENST00000492973 LRP2P98164 4655 aa3.95□□□□□ -1.78
TPR-208ENST00000492973 MOBPQ13875 183 aa3.94□□□□□ -1.78
TPR-208ENST00000492973 C9orf153Q5TBE3 101 aa3.94□□□□□ -1.78
TPR-208ENST00000492973 Q6Q795 121 aa3.92□□□□□ -1.78
TPR-208ENST00000492973 VPS25Q9BRG1 176 aa3.92□□□□□ -1.78
TPR-208ENST00000492973 A0A1B0GW54 56 aa3.91□□□□□ -1.78
TPR-208ENST00000492973 J3QR89 54 aa3.91□□□□□ -1.78
TPR-208ENST00000492973 K7ERU9 68 aa3.91□□□□□ -1.78
TPR-208ENST00000492973 LINC00304Q8N9R0 145 aa3.91□□□□□ -1.78
TPR-208ENST00000492973 ACYP1P07311 99 aa3.9□□□□□ -1.79
TPR-208ENST00000492973 CD164Q04900 197 aa3.9□□□□□ -1.79
TPR-208ENST00000492973 HRCT1Q6UXD1 115 aa3.9□□□□□ -1.79
TPR-208ENST00000492973 TRBV7-7A0A0K0K1E9 115 aa3.89□□□□□ -1.79
TPR-208ENST00000492973 FAM240AA0A1B0GVK7 77 aa3.89□□□□□ -1.79
TPR-208ENST00000492973 LINC00846Q9NV44 126 aa3.89□□□□□ -1.79
TPR-208ENST00000492973 A0A087WSZ3 146 aa3.88□□□□□ -1.79
TPR-208ENST00000492973 SPAG11AQ6PDA7 123 aa3.88□□□□□ -1.79
TPR-208ENST00000492973 MUC2Q02817 5179 aa3.88□□□□□ -1.79
TPR-208ENST00000492973 LPAP08519 4548 aa3.87□□□□□ -1.79
TPR-208ENST00000492973 SPINK1P00995 79 aa3.86□□□□□ -1.79
TPR-208ENST00000492973 NREPQ16612 68 aa3.86□□□□□ -1.79
TPR-208ENST00000492973 Q5XG85 94 aa3.85□□□□□ -1.79
TPR-208ENST00000492973 UBL5Q9BZL1 73 aa3.85□□□□□ -1.79
TPR-208ENST00000492973 LINC00472Q9H8W2 130 aa3.85□□□□□ -1.79
TPR-208ENST00000492973 A8MU10 97 aa3.84□□□□□ -1.79
TPR-208ENST00000492973 RPS29P62273 56 aaKnown RBP3.84□□□□□ -1.79
TPR-208ENST00000492973 ASB16-AS1Q495Z4 193 aa3.84□□□□□ -1.79
TPR-208ENST00000492973 Q96NJ1 140 aa3.84□□□□□ -1.79
TPR-208ENST00000492973 RETNLBQ9BQ08 111 aa3.84□□□□□ -1.79
TPR-208ENST00000492973 PRR4Q16378 134 aa3.83□□□□□ -1.8
TPR-208ENST00000492973 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
TPR-208ENST00000492973 LINC00643Q86TS7 51 aa3.83□□□□□ -1.8
TPR-208ENST00000492973 SS18L2Q9UHA2 77 aa3.83□□□□□ -1.8
TPR-208ENST00000492973 DEFB116Q30KQ4 102 aa3.82□□□□□ -1.8
TPR-208ENST00000492973 C1orf195Q5TG92 126 aa3.82□□□□□ -1.8
TPR-208ENST00000492973 LIMD2Q9BT23 127 aa3.82□□□□□ -1.8
TPR-208ENST00000492973 RNF213Q63HN8 5207 aa3.81□□□□□ -1.8
TPR-208ENST00000492973 IGKV3D-7A0A0C4DH55 119 aa3.81□□□□□ -1.8
TPR-208ENST00000492973 BPY2O14599 106 aa3.8□□□□□ -1.8
TPR-208ENST00000492973 MT-ATP8P03928 68 aa3.8□□□□□ -1.8
TPR-208ENST00000492973 SIGMAR1Q99720 223 aa3.8□□□□□ -1.8
TPR-208ENST00000492973 J3KT08 172 aa3.79□□□□□ -1.8
TPR-208ENST00000492973 IGKV4-1P06312 121 aa3.79□□□□□ -1.8
TPR-208ENST00000492973 CXCL6P80162 114 aa3.79□□□□□ -1.8
TPR-208ENST00000492973 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
TPR-208ENST00000492973 FP248Q71RG6 208 aaPredicted RBP3.79□□□□□ -1.8
TPR-208ENST00000492973 MUC17Q685J3 4493 aa3.79□□□□□ -1.8
TPR-208ENST00000492973 ATP5EP2Q5VTU8 51 aa3.78□□□□□ -1.8
TPR-208ENST00000492973 A8MWP4 228 aa3.76□□□□□ -1.81
TPR-208ENST00000492973 KRTAP13-3Q3SY46 172 aa3.76□□□□□ -1.81
TPR-208ENST00000492973 PRR15Q8IV56 129 aa3.76□□□□□ -1.81
TPR-208ENST00000492973 Q8N9L7 120 aa3.76□□□□□ -1.81
TPR-208ENST00000492973 K7EQZ3 153 aa3.75□□□□□ -1.81
TPR-208ENST00000492973 NDUFB1O75438 58 aa3.75□□□□□ -1.81
TPR-208ENST00000492973 TPRXLQ17RH7 258 aa3.75□□□□□ -1.81
TPR-208ENST00000492973 IMUPQ9GZP8 106 aa3.75□□□□□ -1.81
TPR-208ENST00000492973 A0A1B0GVX0 72 aa3.74□□□□□ -1.81
TPR-208ENST00000492973 HIST1H4AP62805 103 aaKnown RBP3.74□□□□□ -1.81
TPR-208ENST00000492973 A0A087WVE0 104 aa3.73□□□□□ -1.81
TPR-208ENST00000492973 IGHV6-1A0A0B4J1U7 121 aa3.73□□□□□ -1.81
TPR-208ENST00000492973 KRTAP12-2P59991 146 aa3.72□□□□□ -1.81
TPR-208ENST00000492973 C8orf17Q9NRJ1 99 aa3.72□□□□□ -1.81
TPR-208ENST00000492973 MMP24-AS1A0A0U1RRL7 71 aa3.71□□□□□ -1.82
TPR-208ENST00000492973 LINC00313P59037 77 aa3.71□□□□□ -1.82
TPR-208ENST00000492973 C9orf92A6NGG3 77 aa3.7□□□□□ -1.82
TPR-208ENST00000492973 C8orf87E5RJ46 101 aa3.7□□□□□ -1.82
TPR-208ENST00000492973 hDV103S1A0JD37 113 aa3.69□□□□□ -1.82
TPR-208ENST00000492973 HCG22E2RYF7 251 aa3.69□□□□□ -1.82
TPR-208ENST00000492973 WFDC13Q8IUB5 93 aa3.69□□□□□ -1.82
TPR-208ENST00000492973 CASC2Q6XLA1 102 aa3.68□□□□□ -1.82
TPR-208ENST00000492973 TMEM254Q8TBM7 123 aa3.68□□□□□ -1.82
TPR-208ENST00000492973 FAT4Q6V0I7 4981 aa3.68□□□□□ -1.82
TPR-208ENST00000492973 MRPL34Q9BQ48 92 aaKnown RBP3.67□□□□□ -1.82
TPR-208ENST00000492973 FAM236AA0A1B0GUQ0 79 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms