RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 Q8N8P6 123 aa-0.28□□□□□ -2.45
VTA1-204ENST00000491881 COPS9Q8WXC6 57 aa-0.28□□□□□ -2.45
VTA1-204ENST00000491881 V9GYH0 126 aa-0.28□□□□□ -2.45
VTA1-204ENST00000491881 PIGBOS1A0A0B4J2F0 54 aa-0.29□□□□□ -2.46
VTA1-204ENST00000491881 FAM25AB3EWG3 89 aa-0.29□□□□□ -2.46
VTA1-204ENST00000491881 FAM25CB3EWG5 89 aa-0.29□□□□□ -2.46
VTA1-204ENST00000491881 FAM25GB3EWG6 89 aa-0.29□□□□□ -2.46
VTA1-204ENST00000491881 SPAG11BQ08648 103 aa-0.29□□□□□ -2.46
VTA1-204ENST00000491881 H1FX-AS1Q4G0G2 97 aa-0.29□□□□□ -2.46
VTA1-204ENST00000491881 SMIM4Q8WVI0 70 aa-0.29□□□□□ -2.46
VTA1-204ENST00000491881 ARL11Q969Q4 196 aa-0.29□□□□□ -2.46
VTA1-204ENST00000491881 PAIP2BQ9ULR5 123 aaKnown RBP-0.29□□□□□ -2.46
VTA1-204ENST00000491881 LENEPQ9Y5L5 61 aa-0.29□□□□□ -2.46
VTA1-204ENST00000491881 GNG7O60262 68 aa-0.3□□□□□ -2.46
VTA1-204ENST00000491881 HTN1P15515 57 aa-0.3□□□□□ -2.46
VTA1-204ENST00000491881 PRCDQ00LT1 54 aa-0.3□□□□□ -2.46
VTA1-204ENST00000491881 C12orf73Q69YU5 71 aa-0.3□□□□□ -2.46
VTA1-204ENST00000491881 Q6AWC8 147 aa-0.3□□□□□ -2.46
VTA1-204ENST00000491881 SERP1Q9Y6X1 66 aa-0.3□□□□□ -2.46
VTA1-204ENST00000491881 FAM24AA6NFZ4 105 aa-0.31□□□□□ -2.46
VTA1-204ENST00000491881 DEFB1P60022 68 aa-0.31□□□□□ -2.46
VTA1-204ENST00000491881 SPRR4Q96PI1 79 aa-0.31□□□□□ -2.46
VTA1-204ENST00000491881 SNRNP25Q9BV90 132 aaKnown RBP-0.31□□□□□ -2.46
VTA1-204ENST00000491881 RERGLQ9H628 205 aa-0.31□□□□□ -2.46
VTA1-204ENST00000491881 SPRR1BP22528 89 aa-0.32□□□□□ -2.46
VTA1-204ENST00000491881 MEIG1Q5JSS6 88 aa-0.32□□□□□ -2.46
VTA1-204ENST00000491881 FAM107BQ9H098 131 aa-0.32□□□□□ -2.46
VTA1-204ENST00000491881 TP53AIP1Q9HCN2 124 aa-0.32□□□□□ -2.46
VTA1-204ENST00000491881 MIF4GDA9UHW6 222 aaKnown RBP-0.33□□□□□ -2.46
VTA1-204ENST00000491881 S100A3P33764 101 aa-0.33□□□□□ -2.46
VTA1-204ENST00000491881 SPRR1AP35321 89 aa-0.33□□□□□ -2.46
VTA1-204ENST00000491881 CCDC58Q4VC31 144 aa-0.33□□□□□ -2.46
VTA1-204ENST00000491881 TMEM170BQ5T4T1 132 aa-0.33□□□□□ -2.46
VTA1-204ENST00000491881 NCBP2-AS2Q69YL0 99 aa-0.33□□□□□ -2.46
VTA1-204ENST00000491881 SELENOWP63302 87 aa-0.34□□□□□ -2.46
VTA1-204ENST00000491881 COX17Q14061 63 aa-0.34□□□□□ -2.46
VTA1-204ENST00000491881 TMEM203Q969S6 136 aa-0.34□□□□□ -2.46
VTA1-204ENST00000491881 AMELXQ99217 191 aa-0.34□□□□□ -2.46
VTA1-204ENST00000491881 NAA60Q9H7X0 242 aa-0.34□□□□□ -2.46
VTA1-204ENST00000491881 NDUFA4L2Q9NRX3 87 aa-0.34□□□□□ -2.46
VTA1-204ENST00000491881 Q6JHZ5 121 aa-0.35□□□□□ -2.47
VTA1-204ENST00000491881 C6orf201Q7Z4U5 140 aa-0.35□□□□□ -2.47
VTA1-204ENST00000491881 WFDC13Q8IUB5 93 aa-0.35□□□□□ -2.47
VTA1-204ENST00000491881 K7EP34 96 aa-0.36□□□□□ -2.47
VTA1-204ENST00000491881 PRM1P04553 51 aa-0.36□□□□□ -2.47
VTA1-204ENST00000491881 PKIAP61925 76 aa-0.36□□□□□ -2.47
VTA1-204ENST00000491881 CLPSL2Q6UWE3 100 aa-0.36□□□□□ -2.47
VTA1-204ENST00000491881 BAGE2Q86Y30 109 aa-0.36□□□□□ -2.47
VTA1-204ENST00000491881 TSC22D3Q99576 134 aa-0.36□□□□□ -2.47
VTA1-204ENST00000491881 LINC00472Q9H8W2 130 aa-0.36□□□□□ -2.47
VTA1-204ENST00000491881 TRBV6-1A0A0K0K1D8 114 aa-0.37□□□□□ -2.47
VTA1-204ENST00000491881 F8VRH5 84 aa-0.37□□□□□ -2.47
VTA1-204ENST00000491881 UQCR11O14957 56 aa-0.37□□□□□ -2.47
VTA1-204ENST00000491881 PRLHP81277 87 aa-0.37□□□□□ -2.47
VTA1-204ENST00000491881 MGST2Q99735 147 aa-0.37□□□□□ -2.47
VTA1-204ENST00000491881 TRBV7-3A0A075B6L6 115 aa-0.38□□□□□ -2.47
VTA1-204ENST00000491881 TMEM262E9PQX1 116 aa-0.38□□□□□ -2.47
VTA1-204ENST00000491881 APOC3P02656 99 aa-0.38□□□□□ -2.47
VTA1-204ENST00000491881 SAA2P0DJI9 122 aaPredicted RBP-0.38□□□□□ -2.47
VTA1-204ENST00000491881 CATR1Q13166 79 aa-0.38□□□□□ -2.47
VTA1-204ENST00000491881 COMMD6Q7Z4G1 85 aa-0.38□□□□□ -2.47
VTA1-204ENST00000491881 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.38□□□□□ -2.47
VTA1-204ENST00000491881 PPP3R2Q96LZ3 170 aa-0.38□□□□□ -2.47
VTA1-204ENST00000491881 LOC100130705A0A1B0GUX0 176 aa-0.39□□□□□ -2.47
VTA1-204ENST00000491881 IGLC7A0M8Q6 106 aa-0.39□□□□□ -2.47
VTA1-204ENST00000491881 K7EIM0 57 aa-0.39□□□□□ -2.47
VTA1-204ENST00000491881 HMGN2P05204 90 aaKnown RBP-0.39□□□□□ -2.47
VTA1-204ENST00000491881 S100A12P80511 92 aa-0.39□□□□□ -2.47
VTA1-204ENST00000491881 Q56UQ5 140 aa-0.39□□□□□ -2.47
VTA1-204ENST00000491881 F8WEM9 126 aa-0.4□□□□□ -2.47
VTA1-204ENST00000491881 HMGN4O00479 90 aa-0.4□□□□□ -2.47
VTA1-204ENST00000491881 PIGYQ3MUY2 71 aa-0.4□□□□□ -2.47
VTA1-204ENST00000491881 APOC2P02655 101 aa-0.41□□□□□ -2.48
VTA1-204ENST00000491881 SPANXDQ9BXN6 97 aa-0.41□□□□□ -2.48
VTA1-204ENST00000491881 K7EQZ3 153 aa-0.42□□□□□ -2.48
VTA1-204ENST00000491881 CYB5AP00167 134 aa-0.42□□□□□ -2.48
VTA1-204ENST00000491881 FGF7P21781 194 aa-0.42□□□□□ -2.48
VTA1-204ENST00000491881 RPL39P5Q59GN2 51 aa-0.42□□□□□ -2.48
VTA1-204ENST00000491881 LINC01558Q9Y6Z2 57 aa-0.42□□□□□ -2.48
VTA1-204ENST00000491881 PVALEFA0A1B0GWK0 134 aa-0.43□□□□□ -2.48
VTA1-204ENST00000491881 SFT2D2O95562 160 aa-0.43□□□□□ -2.48
VTA1-204ENST00000491881 C5orf38Q86SI9 138 aa-0.43□□□□□ -2.48
VTA1-204ENST00000491881 C8orf59Q8N0T1 100 aaPredicted RBP-0.43□□□□□ -2.48
VTA1-204ENST00000491881 SSSCA1O60232 199 aa-0.44□□□□□ -2.48
VTA1-204ENST00000491881 HMGN1P05114 100 aa-0.44□□□□□ -2.48
VTA1-204ENST00000491881 C9orf153Q5TBE3 101 aa-0.44□□□□□ -2.48
VTA1-204ENST00000491881 DPY30Q9C005 99 aa-0.44□□□□□ -2.48
VTA1-204ENST00000491881 A0A1B0GWA3 101 aa-0.45□□□□□ -2.48
VTA1-204ENST00000491881 CHKB-CPT1BH3BT56 60 aa-0.45□□□□□ -2.48
VTA1-204ENST00000491881 IFNGP01579 166 aa-0.45□□□□□ -2.48
VTA1-204ENST00000491881 AKAIN1P0CW23 69 aa-0.45□□□□□ -2.48
VTA1-204ENST00000491881 MRPL54Q6P161 138 aaKnown RBP-0.45□□□□□ -2.48
VTA1-204ENST00000491881 WT1-ASQ06250 92 aa-0.46□□□□□ -2.48
VTA1-204ENST00000491881 CGREF1Q99674 301 aa-0.46□□□□□ -2.48
VTA1-204ENST00000491881 S4R3F8 94 aa-0.46□□□□□ -2.48
VTA1-204ENST00000491881 LINC01546A6NGU7 62 aa-0.47□□□□□ -2.48
VTA1-204ENST00000491881 MGPP08493 103 aa-0.47□□□□□ -2.48
VTA1-204ENST00000491881 C1orf54Q8WWF1 131 aa-0.47□□□□□ -2.48
VTA1-204ENST00000491881 C6orf48Q9UBA6 75 aa-0.47□□□□□ -2.48
VTA1-204ENST00000491881 A0A087WVE0 104 aa-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms