RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 KRTAP9-2Q9BYQ4 174 aa6.96□□□□□ -1.3
SEC61A1-206ENST00000491668 SEC61BP60468 96 aaKnown RBP6.95□□□□□ -1.3
SEC61A1-206ENST00000491668 NREPQ16612 68 aa6.91□□□□□ -1.3
SEC61A1-206ENST00000491668 SIGMAR1Q99720 223 aa6.91□□□□□ -1.3
SEC61A1-206ENST00000491668 IGKV4-1P06312 121 aa6.9□□□□□ -1.3
SEC61A1-206ENST00000491668 DEFB116Q30KQ4 102 aa6.9□□□□□ -1.3
SEC61A1-206ENST00000491668 C9orf92A6NGG3 77 aa6.89□□□□□ -1.31
SEC61A1-206ENST00000491668 KRTAP19-2Q3LHN2 52 aa6.88□□□□□ -1.31
SEC61A1-206ENST00000491668 Q96NJ1 140 aa6.88□□□□□ -1.31
SEC61A1-206ENST00000491668 J3KT08 172 aa6.87□□□□□ -1.31
SEC61A1-206ENST00000491668 LINC00472Q9H8W2 130 aa6.87□□□□□ -1.31
SEC61A1-206ENST00000491668 UBL5Q9BZL1 73 aa6.86□□□□□ -1.31
SEC61A1-206ENST00000491668 PCOTHQ58A44 107 aa6.85□□□□□ -1.31
SEC61A1-206ENST00000491668 NDUFB1O75438 58 aa6.83□□□□□ -1.32
SEC61A1-206ENST00000491668 LINC00846Q9NV44 126 aa6.83□□□□□ -1.32
SEC61A1-206ENST00000491668 Q6ZVQ6 151 aa6.82□□□□□ -1.32
SEC61A1-206ENST00000491668 IGHV6-1A0A0B4J1U7 121 aa6.81□□□□□ -1.32
SEC61A1-206ENST00000491668 BPY2O14599 106 aa6.81□□□□□ -1.32
SEC61A1-206ENST00000491668 ACYP1P07311 99 aa6.81□□□□□ -1.32
SEC61A1-206ENST00000491668 J3QR89 54 aa6.79□□□□□ -1.32
SEC61A1-206ENST00000491668 A0A1B0GVX0 72 aa6.78□□□□□ -1.32
SEC61A1-206ENST00000491668 A8MWP4 228 aa6.78□□□□□ -1.32
SEC61A1-206ENST00000491668 DSCR10P59022 87 aa6.78□□□□□ -1.32
SEC61A1-206ENST00000491668 LINC00313P59037 77 aa6.78□□□□□ -1.32
SEC61A1-206ENST00000491668 FSIP2Q5CZC0 6907 aa6.77□□□□□ -1.33
SEC61A1-206ENST00000491668 FAM240AA0A1B0GVK7 77 aa6.77□□□□□ -1.33
SEC61A1-206ENST00000491668 RPL37P61927 97 aaKnown RBP6.76□□□□□ -1.33
SEC61A1-206ENST00000491668 MT1HP80294 61 aa6.76□□□□□ -1.33
SEC61A1-206ENST00000491668 LOC100996750A0A140TA64 210 aa6.75□□□□□ -1.33
SEC61A1-206ENST00000491668 C8orf87E5RJ46 101 aa6.75□□□□□ -1.33
SEC61A1-206ENST00000491668 KRTAP4-6Q9BYQ5 205 aa6.75□□□□□ -1.33
SEC61A1-206ENST00000491668 IGKV3D-7A0A0C4DH55 119 aa6.74□□□□□ -1.33
SEC61A1-206ENST00000491668 PRR15Q8IV56 129 aa6.73□□□□□ -1.33
SEC61A1-206ENST00000491668 KRTAP9-6A0A140TA67 174 aa6.72□□□□□ -1.33
SEC61A1-206ENST00000491668 K7EQZ3 153 aa6.72□□□□□ -1.33
SEC61A1-206ENST00000491668 NOTCH2NLQ7Z3S9 236 aa6.7□□□□□ -1.34
SEC61A1-206ENST00000491668 Q8N9L7 120 aa6.7□□□□□ -1.34
SEC61A1-206ENST00000491668 C8orf17Q9NRJ1 99 aa6.7□□□□□ -1.34
SEC61A1-206ENST00000491668 CXCL6P80162 114 aa6.69□□□□□ -1.34
SEC61A1-206ENST00000491668 FLGP20930 4061 aaPredicted RBP6.68□□□□□ -1.34
SEC61A1-206ENST00000491668 K7ERU9 68 aa6.68□□□□□ -1.34
SEC61A1-206ENST00000491668 Q75L30 129 aa6.67□□□□□ -1.34
SEC61A1-206ENST00000491668 ATP5EP2Q5VTU8 51 aa6.66□□□□□ -1.34
SEC61A1-206ENST00000491668 ATP11AUNQ6ZP68 121 aa6.66□□□□□ -1.34
SEC61A1-206ENST00000491668 LINC00643Q86TS7 51 aa6.66□□□□□ -1.34
SEC61A1-206ENST00000491668 hDV103S1A0JD37 113 aa6.65□□□□□ -1.34
SEC61A1-206ENST00000491668 KRTAP16-1A8MUX0 517 aa6.65□□□□□ -1.34
SEC61A1-206ENST00000491668 C20orf166-AS1Q96NR2 134 aa6.65□□□□□ -1.34
SEC61A1-206ENST00000491668 MMP24-AS1A0A0U1RRL7 71 aa6.64□□□□□ -1.35
SEC61A1-206ENST00000491668 A8MUU9 505 aa6.64□□□□□ -1.35
SEC61A1-206ENST00000491668 WFDC13Q8IUB5 93 aa6.64□□□□□ -1.35
SEC61A1-206ENST00000491668 KRTAP10-6P60371 365 aaPredicted RBP6.63□□□□□ -1.35
SEC61A1-206ENST00000491668 CASC2Q6XLA1 102 aa6.63□□□□□ -1.35
SEC61A1-206ENST00000491668 TMEM254Q8TBM7 123 aa6.63□□□□□ -1.35
SEC61A1-206ENST00000491668 NDUFS5O43920 106 aa6.62□□□□□ -1.35
SEC61A1-206ENST00000491668 HIST1H4AP62805 103 aaKnown RBP6.62□□□□□ -1.35
SEC61A1-206ENST00000491668 MRPL34Q9BQ48 92 aaKnown RBP6.62□□□□□ -1.35
SEC61A1-206ENST00000491668 HCG22E2RYF7 251 aa6.61□□□□□ -1.35
SEC61A1-206ENST00000491668 Q8N9P0 234 aaPredicted RBP6.58□□□□□ -1.36
SEC61A1-206ENST00000491668 COX6B2Q6YFQ2 88 aa6.57□□□□□ -1.36
SEC61A1-206ENST00000491668 CRCT1Q9UGL9 99 aa6.55□□□□□ -1.36
SEC61A1-206ENST00000491668 ZCCHC13Q8WW36 166 aaKnown RBP6.54□□□□□ -1.36
SEC61A1-206ENST00000491668 M0R2T5 61 aa6.53□□□□□ -1.36
SEC61A1-206ENST00000491668 A0A087WVE0 104 aa6.51□□□□□ -1.37
SEC61A1-206ENST00000491668 TP53AIP1Q9HCN2 124 aa6.48□□□□□ -1.37
SEC61A1-206ENST00000491668 MT-ATP8P03928 68 aa6.47□□□□□ -1.37
SEC61A1-206ENST00000491668 IMUPQ9GZP8 106 aa6.46□□□□□ -1.38
SEC61A1-206ENST00000491668 SCGB1A1P11684 91 aa6.44□□□□□ -1.38
SEC61A1-206ENST00000491668 Q5W150 140 aa6.42□□□□□ -1.38
SEC61A1-206ENST00000491668 SPINK7P58062 85 aa6.41□□□□□ -1.38
SEC61A1-206ENST00000491668 KRTAP9-8Q9BYQ0 159 aa6.41□□□□□ -1.38
SEC61A1-206ENST00000491668 IGKV2D-30A0A075B6S6 120 aa6.4□□□□□ -1.38
SEC61A1-206ENST00000491668 IGKV2-30P06310 120 aa6.4□□□□□ -1.38
SEC61A1-206ENST00000491668 UQCRQO14949 82 aa6.39□□□□□ -1.39
SEC61A1-206ENST00000491668 MPLKIPQ8TAP9 179 aa6.38□□□□□ -1.39
SEC61A1-206ENST00000491668 TRAV22A0A0B4J277 110 aa6.37□□□□□ -1.39
SEC61A1-206ENST00000491668 HRES1P13985 223 aa6.37□□□□□ -1.39
SEC61A1-206ENST00000491668 C7orf65Q6ZTY9 151 aa6.37□□□□□ -1.39
SEC61A1-206ENST00000491668 FAM236AA0A1B0GUQ0 79 aa6.36□□□□□ -1.39
SEC61A1-206ENST00000491668 FAM236BA0A1B0GV22 79 aa6.36□□□□□ -1.39
SEC61A1-206ENST00000491668 RBM12B-AS1Q9P1G2 102 aa6.35□□□□□ -1.39
SEC61A1-206ENST00000491668 USH2AO75445 5202 aa6.35□□□□□ -1.39
SEC61A1-206ENST00000491668 FAM236DA0A1B0GTK5 79 aa6.34□□□□□ -1.39
SEC61A1-206ENST00000491668 H0Y9P7 68 aa6.34□□□□□ -1.39
SEC61A1-206ENST00000491668 FAM236CP0DP71 79 aa6.34□□□□□ -1.39
SEC61A1-206ENST00000491668 ATOX1O00244 68 aa6.33□□□□□ -1.4
SEC61A1-206ENST00000491668 OCR1Q9BZK8 76 aa6.32□□□□□ -1.4
SEC61A1-206ENST00000491668 MP68P56378 58 aa6.31□□□□□ -1.4
SEC61A1-206ENST00000491668 SMIM20Q8N5G0 67 aa6.31□□□□□ -1.4
SEC61A1-206ENST00000491668 LOC101927531A0A1B0GV80 90 aa6.3□□□□□ -1.4
SEC61A1-206ENST00000491668 MT2AP02795 61 aa6.3□□□□□ -1.4
SEC61A1-206ENST00000491668 SSPOA2VEC9 5147 aa6.3□□□□□ -1.4
SEC61A1-206ENST00000491668 C5orf47Q569G3 176 aa6.29□□□□□ -1.4
SEC61A1-206ENST00000491668 LINC00208Q96KT6 92 aa6.27□□□□□ -1.41
SEC61A1-206ENST00000491668 TRAV7A0A075B6U4 112 aa6.26□□□□□ -1.41
SEC61A1-206ENST00000491668 MT1FP04733 61 aa6.26□□□□□ -1.41
SEC61A1-206ENST00000491668 C1orf64Q8NEQ6 169 aa6.26□□□□□ -1.41
SEC61A1-206ENST00000491668 CYP4F30PQ9H0H9 118 aa6.25□□□□□ -1.41
SEC61A1-206ENST00000491668 KRTAP4-8Q9BYQ9 185 aa6.24□□□□□ -1.41
SEC61A1-206ENST00000491668 H3BPC8 53 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms