RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 A8MUN3 132 aa4.3□□□□□ -1.72
NPHP3-208ENST00000490993 RPS29P62273 56 aaKnown RBP4.3□□□□□ -1.72
NPHP3-208ENST00000490993 Q6ZSA8 131 aa4.29□□□□□ -1.72
NPHP3-208ENST00000490993 A0A087X002 238 aa4.29□□□□□ -1.72
NPHP3-208ENST00000490993 C9orf92A6NGG3 77 aa4.29□□□□□ -1.72
NPHP3-208ENST00000490993 A0A0A0MQY5 61 aa4.28□□□□□ -1.72
NPHP3-208ENST00000490993 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
NPHP3-208ENST00000490993 Q5W150 140 aa4.27□□□□□ -1.73
NPHP3-208ENST00000490993 OXTP01178 125 aa4.27□□□□□ -1.73
NPHP3-208ENST00000490993 HRES1P13985 223 aa4.27□□□□□ -1.73
NPHP3-208ENST00000490993 FP248Q71RG6 208 aaPredicted RBP4.27□□□□□ -1.73
NPHP3-208ENST00000490993 STAB2Q8WWQ8 2551 aa4.27□□□□□ -1.73
NPHP3-208ENST00000490993 TENM3Q9P273 2699 aa4.27□□□□□ -1.73
NPHP3-208ENST00000490993 VWFP04275 2813 aa4.27□□□□□ -1.73
NPHP3-208ENST00000490993 VPS13CQ709C8 3753 aa4.26□□□□□ -1.73
NPHP3-208ENST00000490993 KRTAP13-2Q52LG2 175 aa4.25□□□□□ -1.73
NPHP3-208ENST00000490993 AKAP9Q99996 3911 aa4.25□□□□□ -1.73
NPHP3-208ENST00000490993 Q8N9P0 234 aaPredicted RBP4.24□□□□□ -1.73
NPHP3-208ENST00000490993 LINC01558Q9Y6Z2 57 aa4.23□□□□□ -1.73
NPHP3-208ENST00000490993 NOTCH2NLQ7Z3S9 236 aa4.22□□□□□ -1.73
NPHP3-208ENST00000490993 FBN1P35555 2871 aaKnown RBP4.22□□□□□ -1.73
NPHP3-208ENST00000490993 UQCR11O14957 56 aa4.21□□□□□ -1.73
NPHP3-208ENST00000490993 Q75L30 129 aa4.21□□□□□ -1.73
NPHP3-208ENST00000490993 ZNF469Q96JG9 3925 aaPredicted RBP4.21□□□□□ -1.74
NPHP3-208ENST00000490993 CAMK2N1Q7Z7J9 78 aa4.21□□□□□ -1.74
NPHP3-208ENST00000490993 J3QL48 77 aa4.2□□□□□ -1.74
NPHP3-208ENST00000490993 Q5VSD8 79 aa4.2□□□□□ -1.74
NPHP3-208ENST00000490993 DMAC1Q96GE9 116 aa4.2□□□□□ -1.74
NPHP3-208ENST00000490993 Q8N1X5 172 aa4.19□□□□□ -1.74
NPHP3-208ENST00000490993 CDC42SE1Q9NRR8 79 aa4.18□□□□□ -1.74
NPHP3-208ENST00000490993 ZFHX3Q15911 3703 aa4.18□□□□□ -1.74
NPHP3-208ENST00000490993 KRTAP1-4P0C5Y4 121 aa4.18□□□□□ -1.74
NPHP3-208ENST00000490993 CRIPTQ9P021 101 aa4.18□□□□□ -1.74
NPHP3-208ENST00000490993 LCA10Q71F78 164 aa4.17□□□□□ -1.74
NPHP3-208ENST00000490993 MIR22HGQ0VDD5 57 aa4.16□□□□□ -1.74
NPHP3-208ENST00000490993 Q5VV11 94 aa4.15□□□□□ -1.74
NPHP3-208ENST00000490993 TRRAPQ9Y4A5 3859 aa4.15□□□□□ -1.74
NPHP3-208ENST00000490993 SPINK7P58062 85 aa4.14□□□□□ -1.75
NPHP3-208ENST00000490993 HUWE1Q7Z6Z7 4374 aaKnown RBP4.13□□□□□ -1.75
NPHP3-208ENST00000490993 RBM12B-AS1Q9P1G2 102 aa4.13□□□□□ -1.75
NPHP3-208ENST00000490993 A0A1B0GVY2 172 aa4.08□□□□□ -1.76
NPHP3-208ENST00000490993 KRTAP16-1A8MUX0 517 aa4.08□□□□□ -1.76
NPHP3-208ENST00000490993 A8MUU9 505 aa4.08□□□□□ -1.76
NPHP3-208ENST00000490993 SEC61BP60468 96 aaKnown RBP4.08□□□□□ -1.76
NPHP3-208ENST00000490993 C20orf166-AS1Q96NR2 134 aa4.08□□□□□ -1.76
NPHP3-208ENST00000490993 CUBNO60494 3623 aa4.07□□□□□ -1.76
NPHP3-208ENST00000490993 COX6B2Q6YFQ2 88 aa4.06□□□□□ -1.76
NPHP3-208ENST00000490993 PKD1L1Q8TDX9 2849 aa4.06□□□□□ -1.76
NPHP3-208ENST00000490993 A0A1B0GU33 70 aa4.05□□□□□ -1.76
NPHP3-208ENST00000490993 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
NPHP3-208ENST00000490993 S4R3F8 94 aa4.04□□□□□ -1.76
NPHP3-208ENST00000490993 NDUFAF8A1L188 74 aa4.03□□□□□ -1.76
NPHP3-208ENST00000490993 RPL37P61927 97 aaKnown RBP4.02□□□□□ -1.77
NPHP3-208ENST00000490993 KRTAP13-3Q3SY46 172 aa4.02□□□□□ -1.77
NPHP3-208ENST00000490993 DNAH9Q9NYC9 4486 aa4.02□□□□□ -1.77
NPHP3-208ENST00000490993 FLG2Q5D862 2391 aaPredicted RBP3.99□□□□□ -1.77
NPHP3-208ENST00000490993 CSAG1Q6PB30 78 aa3.99□□□□□ -1.77
NPHP3-208ENST00000490993 SPATA8Q6RVD6 105 aa3.98□□□□□ -1.77
NPHP3-208ENST00000490993 PLAC4Q8WY50 150 aa3.98□□□□□ -1.77
NPHP3-208ENST00000490993 TENM2Q9NT68 2774 aa3.97□□□□□ -1.77
NPHP3-208ENST00000490993 H1FX-AS1Q4G0G2 97 aa3.96□□□□□ -1.77
NPHP3-208ENST00000490993 DNAH3Q8TD57 4116 aa3.96□□□□□ -1.78
NPHP3-208ENST00000490993 ALMS1Q8TCU4 4167 aa3.95□□□□□ -1.78
NPHP3-208ENST00000490993 KRTAP10-8P60410 259 aa3.95□□□□□ -1.78
NPHP3-208ENST00000490993 TGP01266 2768 aa3.94□□□□□ -1.78
NPHP3-208ENST00000490993 ANK2Q01484 3957 aa3.93□□□□□ -1.78
NPHP3-208ENST00000490993 XP32Q5T750 250 aa3.92□□□□□ -1.78
NPHP3-208ENST00000490993 A0A0D9SG42 100 aa3.91□□□□□ -1.78
NPHP3-208ENST00000490993 CMYA5Q8N3K9 4069 aa3.9□□□□□ -1.79
NPHP3-208ENST00000490993 TPRXLQ17RH7 258 aa3.89□□□□□ -1.79
NPHP3-208ENST00000490993 A6NN06 94 aa3.89□□□□□ -1.79
NPHP3-208ENST00000490993 VPS13DQ5THJ4 4388 aa3.89□□□□□ -1.79
NPHP3-208ENST00000490993 FBN3Q75N90 2809 aa3.88□□□□□ -1.79
NPHP3-208ENST00000490993 MEGF8Q7Z7M0 2845 aa3.87□□□□□ -1.79
NPHP3-208ENST00000490993 PLECQ15149 4684 aaKnown RBP3.86□□□□□ -1.79
NPHP3-208ENST00000490993 DNAH1Q9P2D7 4330 aa3.86□□□□□ -1.79
NPHP3-208ENST00000490993 DYNC2H1Q8NCM8 4307 aaKnown RBP3.86□□□□□ -1.79
NPHP3-208ENST00000490993 KRTAP10-4P60372 401 aaPredicted RBP3.85□□□□□ -1.79
NPHP3-208ENST00000490993 ADM2Q7Z4H4 148 aa3.85□□□□□ -1.79
NPHP3-208ENST00000490993 DMBT1Q9UGM3 2413 aaPredicted RBP3.84□□□□□ -1.79
NPHP3-208ENST00000490993 A8MU10 97 aa3.83□□□□□ -1.8
NPHP3-208ENST00000490993 DNAH17Q9UFH2 4485 aa3.83□□□□□ -1.8
NPHP3-208ENST00000490993 M0R2T5 61 aa3.82□□□□□ -1.8
NPHP3-208ENST00000490993 R4GN34 69 aa3.82□□□□□ -1.8
NPHP3-208ENST00000490993 DNAH10Q8IVF4 4471 aa3.81□□□□□ -1.8
NPHP3-208ENST00000490993 M0QZ58 72 aa3.81□□□□□ -1.8
NPHP3-208ENST00000490993 ROMO1P60602 79 aa3.81□□□□□ -1.8
NPHP3-208ENST00000490993 STARD9Q9P2P6 4700 aa3.78□□□□□ -1.8
NPHP3-208ENST00000490993 DNAH6Q9C0G6 4158 aa3.77□□□□□ -1.81
NPHP3-208ENST00000490993 SRRM2Q9UQ35 2752 aaKnown RBP3.76□□□□□ -1.81
NPHP3-208ENST00000490993 COL7A1Q02388 2944 aa3.75□□□□□ -1.81
NPHP3-208ENST00000490993 KRTAP3-1Q9BYR8 98 aa3.74□□□□□ -1.81
NPHP3-208ENST00000490993 H0YAA0 97 aa3.74□□□□□ -1.81
NPHP3-208ENST00000490993 PRKDCP78527 4128 aaKnown RBP3.72□□□□□ -1.81
NPHP3-208ENST00000490993 MT1HL1P0DM35 61 aa3.72□□□□□ -1.81
NPHP3-208ENST00000490993 DNAH2Q9P225 4427 aa3.71□□□□□ -1.82
NPHP3-208ENST00000490993 DNAH7Q8WXX0 4024 aa3.69□□□□□ -1.82
NPHP3-208ENST00000490993 DNAH8Q96JB1 4490 aa3.69□□□□□ -1.82
NPHP3-208ENST00000490993 KRTAP25-1Q3LHN0 102 aa3.68□□□□□ -1.82
NPHP3-208ENST00000490993 DNAH11Q96DT5 4516 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms