RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 SPRR1BP22528 89 aa5.87□□□□□ -1.47
TTC28-207ENST00000490475 SEC61BP60468 96 aaKnown RBP5.86□□□□□ -1.47
TTC28-207ENST00000490475 KRTAP13-3Q3SY46 172 aa5.86□□□□□ -1.47
TTC28-207ENST00000490475 LAMTOR3Q9UHA4 124 aa5.86□□□□□ -1.47
TTC28-207ENST00000490475 TRBV7-4A0A0J9YYF1 115 aa5.85□□□□□ -1.47
TTC28-207ENST00000490475 LINC01547P58512 204 aaPredicted RBP5.85□□□□□ -1.47
TTC28-207ENST00000490475 ASB16-AS1Q495Z4 193 aa5.85□□□□□ -1.47
TTC28-207ENST00000490475 KRTAP9-2Q9BYQ4 174 aa5.85□□□□□ -1.47
TTC28-207ENST00000490475 TRAV7A0A075B6U4 112 aa5.84□□□□□ -1.47
TTC28-207ENST00000490475 NDUFC1O43677 76 aa5.83□□□□□ -1.48
TTC28-207ENST00000490475 SEC61GP60059 68 aa5.83□□□□□ -1.48
TTC28-207ENST00000490475 Q6ZQY7 126 aa5.83□□□□□ -1.48
TTC28-207ENST00000490475 SMIM29Q86T20 159 aa5.83□□□□□ -1.48
TTC28-207ENST00000490475 IGLV5-48A0A075B6I7 105 aa5.82□□□□□ -1.48
TTC28-207ENST00000490475 Q5XG85 94 aa5.82□□□□□ -1.48
TTC28-207ENST00000490475 Q6ZVQ6 151 aa5.82□□□□□ -1.48
TTC28-207ENST00000490475 Q8N377 158 aa5.82□□□□□ -1.48
TTC28-207ENST00000490475 A0A087WVE0 104 aa5.81□□□□□ -1.48
TTC28-207ENST00000490475 KLKP1Q107X0 134 aa5.81□□□□□ -1.48
TTC28-207ENST00000490475 V9GYY9 64 aa5.81□□□□□ -1.48
TTC28-207ENST00000490475 FAT4Q6V0I7 4981 aa5.81□□□□□ -1.48
TTC28-207ENST00000490475 ATP5EP56381 51 aaPredicted RBP5.8□□□□□ -1.48
TTC28-207ENST00000490475 HRCT1Q6UXD1 115 aa5.8□□□□□ -1.48
TTC28-207ENST00000490475 LIMD2Q9BT23 127 aa5.8□□□□□ -1.48
TTC28-207ENST00000490475 A0A0G2JQZ4 141 aa5.79□□□□□ -1.48
TTC28-207ENST00000490475 C4orf26Q17RF5 130 aa5.77□□□□□ -1.49
TTC28-207ENST00000490475 XP32Q5T750 250 aa5.77□□□□□ -1.49
TTC28-207ENST00000490475 SERP1Q9Y6X1 66 aa5.76□□□□□ -1.49
TTC28-207ENST00000490475 MUC17Q685J3 4493 aa5.75□□□□□ -1.49
TTC28-207ENST00000490475 FAM236DA0A1B0GTK5 79 aa5.74□□□□□ -1.49
TTC28-207ENST00000490475 FAM236CP0DP71 79 aa5.74□□□□□ -1.49
TTC28-207ENST00000490475 CD164Q04900 197 aa5.73□□□□□ -1.49
TTC28-207ENST00000490475 C20orf197Q8N268 126 aa5.73□□□□□ -1.49
TTC28-207ENST00000490475 F8WEM9 126 aa5.72□□□□□ -1.49
TTC28-207ENST00000490475 H7BZZ5 65 aa5.72□□□□□ -1.49
TTC28-207ENST00000490475 SMIM26A0A096LP01 95 aa5.71□□□□□ -1.5
TTC28-207ENST00000490475 KRTAP9-6A0A140TA67 174 aa5.71□□□□□ -1.5
TTC28-207ENST00000490475 NREPQ16612 68 aa5.71□□□□□ -1.5
TTC28-207ENST00000490475 LCE2DQ5TA82 110 aaPredicted RBP5.71□□□□□ -1.5
TTC28-207ENST00000490475 C1orf195Q5TG92 126 aa5.71□□□□□ -1.5
TTC28-207ENST00000490475 CYSTM1Q9H1C7 97 aa5.71□□□□□ -1.5
TTC28-207ENST00000490475 IGLV8-61A0A075B6I0 122 aa5.7□□□□□ -1.5
TTC28-207ENST00000490475 BPY2O14599 106 aa5.69□□□□□ -1.5
TTC28-207ENST00000490475 IGFL1Q6UW32 110 aa5.69□□□□□ -1.5
TTC28-207ENST00000490475 KRTAP4-1Q9BYQ7 146 aa5.67□□□□□ -1.5
TTC28-207ENST00000490475 IGKV4-1P06312 121 aa5.66□□□□□ -1.5
TTC28-207ENST00000490475 TMEM254Q8TBM7 123 aa5.66□□□□□ -1.5
TTC28-207ENST00000490475 OCR1Q9BZK8 76 aa5.66□□□□□ -1.5
TTC28-207ENST00000490475 PCOTHQ58A44 107 aa5.63□□□□□ -1.51
TTC28-207ENST00000490475 C9orf92A6NGG3 77 aa5.62□□□□□ -1.51
TTC28-207ENST00000490475 A0A1W2PNM2 257 aa5.59□□□□□ -1.51
TTC28-207ENST00000490475 SNURFQ9Y675 71 aa5.59□□□□□ -1.51
TTC28-207ENST00000490475 NDUFB1O75438 58 aa5.58□□□□□ -1.52
TTC28-207ENST00000490475 LCE2CQ5TA81 110 aa5.57□□□□□ -1.52
TTC28-207ENST00000490475 PRR15Q8IV56 129 aa5.57□□□□□ -1.52
TTC28-207ENST00000490475 A0A087WSZ3 146 aa5.56□□□□□ -1.52
TTC28-207ENST00000490475 RPL37P61927 97 aaKnown RBP5.56□□□□□ -1.52
TTC28-207ENST00000490475 PMAIP1Q13794 54 aa5.56□□□□□ -1.52
TTC28-207ENST00000490475 H3BPC8 53 aa5.55□□□□□ -1.52
TTC28-207ENST00000490475 MT1HP80294 61 aa5.55□□□□□ -1.52
TTC28-207ENST00000490475 KRTAP19-2Q3LHN2 52 aa5.55□□□□□ -1.52
TTC28-207ENST00000490475 BRK1Q8WUW1 75 aa5.55□□□□□ -1.52
TTC28-207ENST00000490475 DSCR10P59022 87 aa5.54□□□□□ -1.52
TTC28-207ENST00000490475 COX6B2Q6YFQ2 88 aa5.54□□□□□ -1.52
TTC28-207ENST00000490475 ZCCHC13Q8WW36 166 aaKnown RBP5.54□□□□□ -1.52
TTC28-207ENST00000490475 HCG22E2RYF7 251 aa5.53□□□□□ -1.52
TTC28-207ENST00000490475 CRCT1Q9UGL9 99 aa5.53□□□□□ -1.52
TTC28-207ENST00000490475 M0R2T5 61 aa5.52□□□□□ -1.53
TTC28-207ENST00000490475 Q8N9L7 120 aa5.52□□□□□ -1.53
TTC28-207ENST00000490475 CYP4F30PQ9H0H9 118 aa5.52□□□□□ -1.53
TTC28-207ENST00000490475 Q96NJ1 140 aa5.51□□□□□ -1.53
TTC28-207ENST00000490475 hDV103S1A0JD37 113 aa5.49□□□□□ -1.53
TTC28-207ENST00000490475 MP68P56378 58 aa5.49□□□□□ -1.53
TTC28-207ENST00000490475 ATP11AUNQ6ZP68 121 aa5.49□□□□□ -1.53
TTC28-207ENST00000490475 K7EQZ3 153 aa5.48□□□□□ -1.53
TTC28-207ENST00000490475 DEFB116Q30KQ4 102 aa5.48□□□□□ -1.53
TTC28-207ENST00000490475 SPANXA2-OT1Q8N9U9 137 aa5.48□□□□□ -1.53
TTC28-207ENST00000490475 FSIP2Q5CZC0 6907 aa5.48□□□□□ -1.53
TTC28-207ENST00000490475 LORP23490 312 aaPredicted RBP5.47□□□□□ -1.53
TTC28-207ENST00000490475 KRTAP10-6P60371 365 aaPredicted RBP5.47□□□□□ -1.53
TTC28-207ENST00000490475 Q75L30 129 aa5.47□□□□□ -1.53
TTC28-207ENST00000490475 Q1T7F1 81 aa5.46□□□□□ -1.54
TTC28-207ENST00000490475 LINC00472Q9H8W2 130 aa5.46□□□□□ -1.54
TTC28-207ENST00000490475 A8MWP4 228 aa5.45□□□□□ -1.54
TTC28-207ENST00000490475 NOTCH2NLQ7Z3S9 236 aa5.42□□□□□ -1.54
TTC28-207ENST00000490475 TP53AIP1Q9HCN2 124 aa5.42□□□□□ -1.54
TTC28-207ENST00000490475 TRAV22A0A0B4J277 110 aa5.41□□□□□ -1.54
TTC28-207ENST00000490475 CASC2Q6XLA1 102 aa5.41□□□□□ -1.54
TTC28-207ENST00000490475 LINC00313P59037 77 aa5.4□□□□□ -1.54
TTC28-207ENST00000490475 C1orf64Q8NEQ6 169 aa5.4□□□□□ -1.54
TTC28-207ENST00000490475 IGHV6-1A0A0B4J1U7 121 aa5.39□□□□□ -1.55
TTC28-207ENST00000490475 A8MUU9 505 aa5.38□□□□□ -1.55
TTC28-207ENST00000490475 C20orf166-AS1Q96NR2 134 aa5.38□□□□□ -1.55
TTC28-207ENST00000490475 NDUFS5O43920 106 aa5.37□□□□□ -1.55
TTC28-207ENST00000490475 A0A1B0GVX0 72 aa5.36□□□□□ -1.55
TTC28-207ENST00000490475 KRTAP16-1A8MUX0 517 aa5.36□□□□□ -1.55
TTC28-207ENST00000490475 H0Y9P7 68 aa5.36□□□□□ -1.55
TTC28-207ENST00000490475 KTN1-AS1Q86SY8 53 aa5.36□□□□□ -1.55
TTC28-207ENST00000490475 FLGP20930 4061 aaPredicted RBP5.35□□□□□ -1.55
TTC28-207ENST00000490475 WFDC13Q8IUB5 93 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms