RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 RPL37AP61513 92 aaKnown RBP1.52□□□□□ -2.17
UBXN4-208ENST00000490163 HUWE1Q7Z6Z7 4374 aaKnown RBP1.52□□□□□ -2.17
UBXN4-208ENST00000490163 PKHD1L1Q86WI1 4243 aa1.52□□□□□ -2.17
UBXN4-208ENST00000490163 CSMD2Q7Z408 3487 aa1.52□□□□□ -2.17
UBXN4-208ENST00000490163 K7ERS5 55 aa1.51□□□□□ -2.17
UBXN4-208ENST00000490163 KRTAP25-1Q3LHN0 102 aa1.51□□□□□ -2.17
UBXN4-208ENST00000490163 APCP25054 2843 aa1.51□□□□□ -2.17
UBXN4-208ENST00000490163 TPRXLQ17RH7 258 aa1.51□□□□□ -2.17
UBXN4-208ENST00000490163 KRTAP13-3Q3SY46 172 aa1.51□□□□□ -2.17
UBXN4-208ENST00000490163 FN1P02751 2386 aaKnown RBP1.51□□□□□ -2.17
UBXN4-208ENST00000490163 DSPP15924 2871 aaKnown RBP1.51□□□□□ -2.17
UBXN4-208ENST00000490163 Q6ZRX8 168 aa1.51□□□□□ -2.17
UBXN4-208ENST00000490163 PRO0255Q9UI72 69 aa1.51□□□□□ -2.17
UBXN4-208ENST00000490163 TRRAPQ9Y4A5 3859 aa1.51□□□□□ -2.17
UBXN4-208ENST00000490163 SONP18583 2426 aaKnown RBP1.51□□□□□ -2.17
UBXN4-208ENST00000490163 F8P00451 2351 aa1.5□□□□□ -2.17
UBXN4-208ENST00000490163 C4orf3Q8WVX3 66 aa1.5□□□□□ -2.17
UBXN4-208ENST00000490163 FAT2Q9NYQ8 4349 aa1.5□□□□□ -2.17
UBXN4-208ENST00000490163 IGKV2-24A0A0C4DH68 120 aa1.5□□□□□ -2.17
UBXN4-208ENST00000490163 C10orf99Q6UWK7 81 aa1.5□□□□□ -2.17
UBXN4-208ENST00000490163 FRAS1Q86XX4 4008 aa1.5□□□□□ -2.17
UBXN4-208ENST00000490163 TLN2Q9Y4G6 2542 aa1.5□□□□□ -2.17
UBXN4-208ENST00000490163 ASH1LQ9NR48 2969 aaKnown RBP1.5□□□□□ -2.17
UBXN4-208ENST00000490163 CELSR1Q9NYQ6 3014 aa1.5□□□□□ -2.17
UBXN4-208ENST00000490163 KRTAP6-3Q3LI67 103 aa1.5□□□□□ -2.17
UBXN4-208ENST00000490163 IGFL1Q6UW32 110 aa1.5□□□□□ -2.17
UBXN4-208ENST00000490163 UTP20O75691 2785 aaKnown RBP1.49□□□□□ -2.17
UBXN4-208ENST00000490163 GCN1Q92616 2671 aaKnown RBP1.49□□□□□ -2.17
UBXN4-208ENST00000490163 USP9XQ93008 2570 aaPredicted RBP1.49□□□□□ -2.17
UBXN4-208ENST00000490163 MMP24-AS1A0A0U1RRL7 71 aa1.49□□□□□ -2.17
UBXN4-208ENST00000490163 LINC00483Q53H64 154 aa1.49□□□□□ -2.17
UBXN4-208ENST00000490163 DMAC1Q96GE9 116 aa1.49□□□□□ -2.17
UBXN4-208ENST00000490163 LYSTQ99698 3801 aa1.49□□□□□ -2.17
UBXN4-208ENST00000490163 ATRXP46100 2492 aa1.49□□□□□ -2.17
UBXN4-208ENST00000490163 CEP295Q9C0D2 2601 aa1.48□□□□□ -2.17
UBXN4-208ENST00000490163 JMJD1CQ15652 2540 aa1.48□□□□□ -2.17
UBXN4-208ENST00000490163 A0A0G2JQZ4 141 aa1.48□□□□□ -2.17
UBXN4-208ENST00000490163 A0A1W2PNN7 141 aa1.48□□□□□ -2.17
UBXN4-208ENST00000490163 DNAH17Q9UFH2 4485 aa1.48□□□□□ -2.17
UBXN4-208ENST00000490163 VPS13DQ5THJ4 4388 aa1.48□□□□□ -2.17
UBXN4-208ENST00000490163 MYO9AB2RTY4 2548 aa1.48□□□□□ -2.17
UBXN4-208ENST00000490163 NCOR2Q9Y618 2525 aa1.48□□□□□ -2.17
UBXN4-208ENST00000490163 FLNCQ14315 2725 aa1.48□□□□□ -2.17
UBXN4-208ENST00000490163 LELP1Q5T871 98 aa1.48□□□□□ -2.17
UBXN4-208ENST00000490163 C20orf166-AS1Q96NR2 134 aa1.48□□□□□ -2.17
UBXN4-208ENST00000490163 SMR3AQ99954 134 aa1.48□□□□□ -2.17
UBXN4-208ENST00000490163 CRYBG3Q68DQ2 2970 aa1.47□□□□□ -2.17
UBXN4-208ENST00000490163 LRBAP50851 2863 aa1.47□□□□□ -2.17
UBXN4-208ENST00000490163 DNAH8Q96JB1 4490 aa1.47□□□□□ -2.17
UBXN4-208ENST00000490163 CSMD1Q96PZ7 3565 aa1.47□□□□□ -2.17
UBXN4-208ENST00000490163 NUPR2A6NF83 97 aa1.47□□□□□ -2.17
UBXN4-208ENST00000490163 HTN3P15516 51 aa1.47□□□□□ -2.17
UBXN4-208ENST00000490163 KRTAP10-10P60014 251 aa1.47□□□□□ -2.17
UBXN4-208ENST00000490163 SSBP3-AS1Q7Z2R9 100 aa1.47□□□□□ -2.17
UBXN4-208ENST00000490163 SPACA4Q8TDM5 124 aa1.47□□□□□ -2.17
UBXN4-208ENST00000490163 MRPL34Q9BQ48 92 aaKnown RBP1.47□□□□□ -2.17
UBXN4-208ENST00000490163 CELSR2Q9HCU4 2923 aa1.47□□□□□ -2.17
UBXN4-208ENST00000490163 CHD6Q8TD26 2715 aa1.47□□□□□ -2.17
UBXN4-208ENST00000490163 ITPR3Q14573 2671 aa1.46□□□□□ -2.18
UBXN4-208ENST00000490163 LINC00472Q9H8W2 130 aa1.46□□□□□ -2.18
UBXN4-208ENST00000490163 DNAH2Q9P225 4427 aa1.46□□□□□ -2.18
UBXN4-208ENST00000490163 SPRR1AP35321 89 aa1.46□□□□□ -2.18
UBXN4-208ENST00000490163 ZFYVE26Q68DK2 2539 aa1.46□□□□□ -2.18
UBXN4-208ENST00000490163 DNAH10Q8IVF4 4471 aa1.46□□□□□ -2.18
UBXN4-208ENST00000490163 FLG2Q5D862 2391 aaPredicted RBP1.46□□□□□ -2.18
UBXN4-208ENST00000490163 CHD8Q9HCK8 2581 aa1.46□□□□□ -2.18
UBXN4-208ENST00000490163 NAV2Q8IVL1 2488 aa1.45□□□□□ -2.18
UBXN4-208ENST00000490163 UNC79Q9P2D8 2635 aa1.45□□□□□ -2.18
UBXN4-208ENST00000490163 ADGRG4Q8IZF6 3080 aa1.45□□□□□ -2.18
UBXN4-208ENST00000490163 BAHCC1Q9P281 2608 aa1.45□□□□□ -2.18
UBXN4-208ENST00000490163 A0A096LNI7 61 aa1.45□□□□□ -2.18
UBXN4-208ENST00000490163 PKHD1P08F94 4074 aa1.44□□□□□ -2.18
UBXN4-208ENST00000490163 HECTD4Q9Y4D8 3996 aa1.44□□□□□ -2.18
UBXN4-208ENST00000490163 KRTAP10-1P60331 282 aa1.44□□□□□ -2.18
UBXN4-208ENST00000490163 PRLHP81277 87 aa1.44□□□□□ -2.18
UBXN4-208ENST00000490163 PTPN13Q12923 2485 aa1.44□□□□□ -2.18
UBXN4-208ENST00000490163 USP9YO00507 2555 aaPredicted RBP1.44□□□□□ -2.18
UBXN4-208ENST00000490163 CRIPTQ9P021 101 aa1.44□□□□□ -2.18
UBXN4-208ENST00000490163 FAM208BQ5VWN6 2430 aa1.44□□□□□ -2.18
UBXN4-208ENST00000490163 ACACBO00763 2458 aa1.44□□□□□ -2.18
UBXN4-208ENST00000490163 LINC00304Q8N9R0 145 aa1.44□□□□□ -2.18
UBXN4-208ENST00000490163 HIVEP2P31629 2446 aa1.43□□□□□ -2.18
UBXN4-208ENST00000490163 FAT3Q8TDW7 4589 aa1.43□□□□□ -2.18
UBXN4-208ENST00000490163 LY6G6CO95867 125 aa1.43□□□□□ -2.18
UBXN4-208ENST00000490163 NSD1Q96L73 2696 aaPredicted RBP1.43□□□□□ -2.18
UBXN4-208ENST00000490163 PKD1P98161 4303 aa1.43□□□□□ -2.18
UBXN4-208ENST00000490163 MTORP42345 2549 aa1.43□□□□□ -2.18
UBXN4-208ENST00000490163 KRTAP9-6A8MVA2 160 aa1.43□□□□□ -2.18
UBXN4-208ENST00000490163 DEFB4AO15263 64 aa1.43□□□□□ -2.18
UBXN4-208ENST00000490163 KRTAP5-8O75690 187 aa1.42□□□□□ -2.18
UBXN4-208ENST00000490163 SPART-AS1P0CW21 52 aa1.42□□□□□ -2.18
UBXN4-208ENST00000490163 DNAH11Q96DT5 4516 aa1.42□□□□□ -2.18
UBXN4-208ENST00000490163 DNHD1Q96M86 4753 aa1.42□□□□□ -2.18
UBXN4-208ENST00000490163 TACC2O95359 2948 aa1.42□□□□□ -2.18
UBXN4-208ENST00000490163 SPINK1P00995 79 aa1.42□□□□□ -2.18
UBXN4-208ENST00000490163 MXRA5Q9NR99 2828 aa1.42□□□□□ -2.18
UBXN4-208ENST00000490163 MAP1AP78559 2803 aaPredicted RBP1.42□□□□□ -2.18
UBXN4-208ENST00000490163 A0A087WTM6 91 aa1.42□□□□□ -2.18
UBXN4-208ENST00000490163 K7EIL1 84 aa1.42□□□□□ -2.18
UBXN4-208ENST00000490163 LCE3EQ5T5B0 92 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms