RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 A0A1W2PNN7 141 aa2.95□□□□□ -1.94
SNRNP40-206ENST00000489853 CSAG1Q6PB30 78 aa2.94□□□□□ -1.94
SNRNP40-206ENST00000489853 CDK2AP2O75956 126 aa2.93□□□□□ -1.94
SNRNP40-206ENST00000489853 TENM1Q9UKZ4 2725 aa2.93□□□□□ -1.94
SNRNP40-206ENST00000489853 ACYP2P14621 99 aa2.93□□□□□ -1.94
SNRNP40-206ENST00000489853 REG3GQ6UW15 175 aa2.93□□□□□ -1.94
SNRNP40-206ENST00000489853 SONP18583 2426 aaKnown RBP2.92□□□□□ -1.94
SNRNP40-206ENST00000489853 TGP01266 2768 aa2.92□□□□□ -1.94
SNRNP40-206ENST00000489853 MIR22HGQ0VDD5 57 aa2.92□□□□□ -1.94
SNRNP40-206ENST00000489853 A0A1B0GU69 56 aa2.91□□□□□ -1.94
SNRNP40-206ENST00000489853 UQCR11O14957 56 aa2.91□□□□□ -1.94
SNRNP40-206ENST00000489853 SPART-AS1P0CW21 52 aa2.91□□□□□ -1.94
SNRNP40-206ENST00000489853 C1orf134Q5TEV5 83 aa2.91□□□□□ -1.94
SNRNP40-206ENST00000489853 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
SNRNP40-206ENST00000489853 ZNF706Q9Y5V0 76 aaPredicted RBP2.91□□□□□ -1.94
SNRNP40-206ENST00000489853 ANK2Q01484 3957 aa2.91□□□□□ -1.94
SNRNP40-206ENST00000489853 PKD1L1Q8TDX9 2849 aa2.91□□□□□ -1.94
SNRNP40-206ENST00000489853 FAM168BA1KXE4 195 aa2.9□□□□□ -1.95
SNRNP40-206ENST00000489853 DEFB4AO15263 64 aa2.9□□□□□ -1.95
SNRNP40-206ENST00000489853 KRTAP7-1Q8IUC3 87 aa2.9□□□□□ -1.95
SNRNP40-206ENST00000489853 IGHV6-1A0A0B4J1U7 121 aa2.89□□□□□ -1.95
SNRNP40-206ENST00000489853 HTN3P15516 51 aa2.89□□□□□ -1.95
SNRNP40-206ENST00000489853 SPRR1BP22528 89 aa2.89□□□□□ -1.95
SNRNP40-206ENST00000489853 C8orf17Q9NRJ1 99 aa2.89□□□□□ -1.95
SNRNP40-206ENST00000489853 H3BNG1 76 aa2.89□□□□□ -1.95
SNRNP40-206ENST00000489853 ZNF861PO60384 105 aa2.89□□□□□ -1.95
SNRNP40-206ENST00000489853 ROMO1P60602 79 aa2.88□□□□□ -1.95
SNRNP40-206ENST00000489853 MAPK1IP1LQ8NDC0 245 aa2.88□□□□□ -1.95
SNRNP40-206ENST00000489853 HIVEP2P31629 2446 aa2.88□□□□□ -1.95
SNRNP40-206ENST00000489853 DEFB135Q30KP9 77 aa2.87□□□□□ -1.95
SNRNP40-206ENST00000489853 NBEAL2Q6ZNJ1 2754 aa2.87□□□□□ -1.95
SNRNP40-206ENST00000489853 LINC01556Q5JQF7 62 aa2.87□□□□□ -1.95
SNRNP40-206ENST00000489853 DMAC1Q96GE9 116 aa2.87□□□□□ -1.95
SNRNP40-206ENST00000489853 MRPL34Q9BQ48 92 aaKnown RBP2.87□□□□□ -1.95
SNRNP40-206ENST00000489853 ALMS1Q8TCU4 4167 aa2.87□□□□□ -1.95
SNRNP40-206ENST00000489853 DEFB113Q30KQ7 82 aa2.86□□□□□ -1.95
SNRNP40-206ENST00000489853 MGAM2Q2M2H8 2515 aa2.86□□□□□ -1.95
SNRNP40-206ENST00000489853 A0A1B0GVX0 72 aa2.85□□□□□ -1.95
SNRNP40-206ENST00000489853 PRLHP81277 87 aa2.85□□□□□ -1.95
SNRNP40-206ENST00000489853 KRTAP25-1Q3LHN0 102 aa2.85□□□□□ -1.95
SNRNP40-206ENST00000489853 Q96NJ1 140 aa2.85□□□□□ -1.95
SNRNP40-206ENST00000489853 TRRAPQ9Y4A5 3859 aa2.85□□□□□ -1.95
SNRNP40-206ENST00000489853 KRTAP13-3Q3SY46 172 aa2.83□□□□□ -1.96
SNRNP40-206ENST00000489853 NOTCH2NLQ7Z3S9 236 aa2.83□□□□□ -1.96
SNRNP40-206ENST00000489853 IGLV7-43P04211 117 aa2.83□□□□□ -1.96
SNRNP40-206ENST00000489853 KRTAP24-1Q3LI83 254 aa2.83□□□□□ -1.96
SNRNP40-206ENST00000489853 VWFP04275 2813 aa2.83□□□□□ -1.96
SNRNP40-206ENST00000489853 Q5W150 140 aa2.82□□□□□ -1.96
SNRNP40-206ENST00000489853 PRKDCP78527 4128 aaKnown RBP2.82□□□□□ -1.96
SNRNP40-206ENST00000489853 DNAH10OSP0CZ25 163 aa2.81□□□□□ -1.96
SNRNP40-206ENST00000489853 K7EIL1 84 aa2.81□□□□□ -1.96
SNRNP40-206ENST00000489853 A0A096LNI7 61 aa2.8□□□□□ -1.96
SNRNP40-206ENST00000489853 KMT2CQ8NEZ4 4911 aaKnown RBP2.8□□□□□ -1.96
SNRNP40-206ENST00000489853 A8MUU9 505 aa2.8□□□□□ -1.96
SNRNP40-206ENST00000489853 NOTCH1P46531 2555 aa2.79□□□□□ -1.96
SNRNP40-206ENST00000489853 P0C880 135 aa2.79□□□□□ -1.96
SNRNP40-206ENST00000489853 CASC10Q5T4H9 136 aa2.79□□□□□ -1.96
SNRNP40-206ENST00000489853 RYR3Q15413 4870 aa2.78□□□□□ -1.96
SNRNP40-206ENST00000489853 CMYA5Q8N3K9 4069 aa2.78□□□□□ -1.96
SNRNP40-206ENST00000489853 IGKV2-30P06310 120 aa2.78□□□□□ -1.97
SNRNP40-206ENST00000489853 LINC00304Q8N9R0 145 aa2.78□□□□□ -1.97
SNRNP40-206ENST00000489853 TENM2Q9NT68 2774 aa2.77□□□□□ -1.97
SNRNP40-206ENST00000489853 LINC00483Q53H64 154 aa2.77□□□□□ -1.97
SNRNP40-206ENST00000489853 KRTAP11-1Q8IUC1 163 aa2.76□□□□□ -1.97
SNRNP40-206ENST00000489853 KRTAP10-3P60369 221 aa2.76□□□□□ -1.97
SNRNP40-206ENST00000489853 LY6G6CO95867 125 aa2.75□□□□□ -1.97
SNRNP40-206ENST00000489853 KRTAP13-1Q8IUC0 172 aa2.75□□□□□ -1.97
SNRNP40-206ENST00000489853 CHTF8P0CG12 524 aa2.74□□□□□ -1.97
SNRNP40-206ENST00000489853 PANO1I0J062 215 aa2.74□□□□□ -1.97
SNRNP40-206ENST00000489853 KRTAP16-1A8MUX0 517 aa2.72□□□□□ -1.97
SNRNP40-206ENST00000489853 Q6ZSA8 131 aa2.72□□□□□ -1.97
SNRNP40-206ENST00000489853 COL7A1Q02388 2944 aa2.72□□□□□ -1.97
SNRNP40-206ENST00000489853 IGKV2D-30A0A075B6S6 120 aa2.72□□□□□ -1.97
SNRNP40-206ENST00000489853 H0YAA0 97 aa2.72□□□□□ -1.97
SNRNP40-206ENST00000489853 EPPK1P58107 5090 aaKnown RBP2.71□□□□□ -1.98
SNRNP40-206ENST00000489853 NUPR2A6NF83 97 aa2.71□□□□□ -1.98
SNRNP40-206ENST00000489853 C14orf177Q52M58 125 aa2.71□□□□□ -1.98
SNRNP40-206ENST00000489853 TENM3Q9P273 2699 aa2.71□□□□□ -1.98
SNRNP40-206ENST00000489853 K7ERS5 55 aa2.7□□□□□ -1.98
SNRNP40-206ENST00000489853 A0A1B0GU33 70 aa2.7□□□□□ -1.98
SNRNP40-206ENST00000489853 SPINK6Q6UWN8 80 aa2.7□□□□□ -1.98
SNRNP40-206ENST00000489853 C20orf166-AS1Q96NR2 134 aa2.7□□□□□ -1.98
SNRNP40-206ENST00000489853 SSBP3-AS1Q7Z2R9 100 aa2.69□□□□□ -1.98
SNRNP40-206ENST00000489853 SPINT4Q6UDR6 99 aa2.68□□□□□ -1.98
SNRNP40-206ENST00000489853 A0A087WTM6 91 aa2.68□□□□□ -1.98
SNRNP40-206ENST00000489853 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
SNRNP40-206ENST00000489853 ANAPC11Q9NYG5 84 aa2.68□□□□□ -1.98
SNRNP40-206ENST00000489853 CSMD3Q7Z407 3707 aa2.67□□□□□ -1.98
SNRNP40-206ENST00000489853 SPINK1P00995 79 aa2.67□□□□□ -1.98
SNRNP40-206ENST00000489853 H1FX-AS1Q4G0G2 97 aa2.67□□□□□ -1.98
SNRNP40-206ENST00000489853 CRIPTQ9P021 101 aa2.67□□□□□ -1.98
SNRNP40-206ENST00000489853 SRRM2Q9UQ35 2752 aaKnown RBP2.67□□□□□ -1.98
SNRNP40-206ENST00000489853 FLG2Q5D862 2391 aaPredicted RBP2.66□□□□□ -1.98
SNRNP40-206ENST00000489853 PSORS1C2Q9UIG4 136 aa2.66□□□□□ -1.98
SNRNP40-206ENST00000489853 DNAH3Q8TD57 4116 aa2.66□□□□□ -1.98
SNRNP40-206ENST00000489853 DNAH1Q9P2D7 4330 aa2.64□□□□□ -1.99
SNRNP40-206ENST00000489853 HYDINQ4G0P3 5121 aa2.64□□□□□ -1.99
SNRNP40-206ENST00000489853 TYMSOSQ8TAI1 123 aa2.63□□□□□ -1.99
SNRNP40-206ENST00000489853 CIRBP-AS1Q8TBR5 109 aa2.63□□□□□ -1.99
SNRNP40-206ENST00000489853 DNAH9Q9NYC9 4486 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms