RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 DNAH7Q8WXX0 4024 aa11.73□□□□□ -0.53
HMG20B-213ENST00000488973 COL7A1Q02388 2944 aa11.73□□□□□ -0.53
HMG20B-213ENST00000488973 NBDYA0A0U1RRE5 68 aa11.72□□□□□ -0.53
HMG20B-213ENST00000488973 SPACA4Q8TDM5 124 aa11.72□□□□□ -0.53
HMG20B-213ENST00000488973 Q6ZRN7 208 aaPredicted RBP11.71□□□□□ -0.53
HMG20B-213ENST00000488973 ZNF706Q9Y5V0 76 aaPredicted RBP11.7□□□□□ -0.54
HMG20B-213ENST00000488973 CSMD3Q7Z407 3707 aa11.7□□□□□ -0.54
HMG20B-213ENST00000488973 IGHV6-1A0A0B4J1U7 121 aa11.7□□□□□ -0.54
HMG20B-213ENST00000488973 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.69□□□□□ -0.54
HMG20B-213ENST00000488973 MRPL34Q9BQ48 92 aaKnown RBP11.68□□□□□ -0.54
HMG20B-213ENST00000488973 CDK2AP2O75956 126 aa11.68□□□□□ -0.54
HMG20B-213ENST00000488973 ADM2Q7Z4H4 148 aa11.67□□□□□ -0.54
HMG20B-213ENST00000488973 WWC2-AS2Q96NR7 200 aa11.67□□□□□ -0.54
HMG20B-213ENST00000488973 NUPR2A6NF83 97 aa11.67□□□□□ -0.54
HMG20B-213ENST00000488973 PLECQ15149 4684 aaKnown RBP11.65□□□□□ -0.54
HMG20B-213ENST00000488973 HRES1P13985 223 aa11.61□□□□□ -0.55
HMG20B-213ENST00000488973 RTL8CO15255 209 aa11.6□□□□□ -0.55
HMG20B-213ENST00000488973 IGLV5-52A0A0A0MRZ9 124 aa11.58□□□□□ -0.56
HMG20B-213ENST00000488973 PSORS1C2Q9UIG4 136 aa11.58□□□□□ -0.56
HMG20B-213ENST00000488973 NOTCH2NLQ7Z3S9 236 aa11.58□□□□□ -0.56
HMG20B-213ENST00000488973 ZNF861PO60384 105 aa11.56□□□□□ -0.56
HMG20B-213ENST00000488973 DNAH8Q96JB1 4490 aa11.55□□□□□ -0.56
HMG20B-213ENST00000488973 KRTAP21-3Q3LHN1 58 aa11.55□□□□□ -0.56
HMG20B-213ENST00000488973 HECTD4Q9Y4D8 3996 aa11.54□□□□□ -0.56
HMG20B-213ENST00000488973 A0A087WTM6 91 aa11.54□□□□□ -0.56
HMG20B-213ENST00000488973 DNHD1Q96M86 4753 aa11.53□□□□□ -0.56
HMG20B-213ENST00000488973 RETNLBQ9BQ08 111 aa11.53□□□□□ -0.56
HMG20B-213ENST00000488973 ANAPC11Q9NYG5 84 aa11.53□□□□□ -0.56
HMG20B-213ENST00000488973 VPS13DQ5THJ4 4388 aa11.5□□□□□ -0.57
HMG20B-213ENST00000488973 KRTAP13-3Q3SY46 172 aa11.5□□□□□ -0.57
HMG20B-213ENST00000488973 PRKDCP78527 4128 aaKnown RBP11.49□□□□□ -0.57
HMG20B-213ENST00000488973 Q5W150 140 aa11.48□□□□□ -0.57
HMG20B-213ENST00000488973 MEGF8Q7Z7M0 2845 aa11.47□□□□□ -0.57
HMG20B-213ENST00000488973 FRAS1Q86XX4 4008 aa11.47□□□□□ -0.57
HMG20B-213ENST00000488973 SPINK6Q6UWN8 80 aa11.44□□□□□ -0.58
HMG20B-213ENST00000488973 ALMS1Q8TCU4 4167 aa11.44□□□□□ -0.58
HMG20B-213ENST00000488973 DNAH17Q9UFH2 4485 aa11.44□□□□□ -0.58
HMG20B-213ENST00000488973 SPATA8Q6RVD6 105 aa11.42□□□□□ -0.58
HMG20B-213ENST00000488973 ACYP2P14621 99 aa11.4□□□□□ -0.58
HMG20B-213ENST00000488973 CSAG1Q6PB30 78 aa11.39□□□□□ -0.59
HMG20B-213ENST00000488973 STARD9Q9P2P6 4700 aa11.38□□□□□ -0.59
HMG20B-213ENST00000488973 IGLV7-43P04211 117 aa11.37□□□□□ -0.59
HMG20B-213ENST00000488973 CIRBP-AS1Q8TBR5 109 aa11.37□□□□□ -0.59
HMG20B-213ENST00000488973 SSBP3-AS1Q7Z2R9 100 aa11.34□□□□□ -0.59
HMG20B-213ENST00000488973 DNAH2Q9P225 4427 aa11.33□□□□□ -0.6
HMG20B-213ENST00000488973 DMAC1Q96GE9 116 aa11.33□□□□□ -0.6
HMG20B-213ENST00000488973 FAM229AH3BQW9 127 aa11.28□□□□□ -0.6
HMG20B-213ENST00000488973 C1orf134Q5TEV5 83 aa11.26□□□□□ -0.61
HMG20B-213ENST00000488973 FBN3Q75N90 2809 aa11.25□□□□□ -0.61
HMG20B-213ENST00000488973 KMT2AQ03164 3969 aa11.25□□□□□ -0.61
HMG20B-213ENST00000488973 MIR22HGQ0VDD5 57 aa11.24□□□□□ -0.61
HMG20B-213ENST00000488973 IGKV2-30P06310 120 aa11.22□□□□□ -0.61
HMG20B-213ENST00000488973 A0A1B0GU69 56 aa11.21□□□□□ -0.61
HMG20B-213ENST00000488973 UQCR11O14957 56 aa11.2□□□□□ -0.62
HMG20B-213ENST00000488973 ROMO1P60602 79 aa11.18□□□□□ -0.62
HMG20B-213ENST00000488973 LY6G6CO95867 125 aa11.17□□□□□ -0.62
HMG20B-213ENST00000488973 DNAH11Q96DT5 4516 aa11.14□□□□□ -0.63
HMG20B-213ENST00000488973 KRTAP16-1A8MUX0 517 aa11.13□□□□□ -0.63
HMG20B-213ENST00000488973 KRTAP13-2Q52LG2 175 aa11.11□□□□□ -0.63
HMG20B-213ENST00000488973 TGP01266 2768 aa11.09□□□□□ -0.63
HMG20B-213ENST00000488973 DNAH5Q8TE73 4624 aa11.08□□□□□ -0.64
HMG20B-213ENST00000488973 DNAH6Q9C0G6 4158 aa11.07□□□□□ -0.64
HMG20B-213ENST00000488973 KRTAP25-1Q3LHN0 102 aa11.02□□□□□ -0.65
HMG20B-213ENST00000488973 IGKV2D-30A0A075B6S6 120 aa11□□□□□ -0.65
HMG20B-213ENST00000488973 KRTAP10-2P60368 255 aa10.99□□□□□ -0.65
HMG20B-213ENST00000488973 KRTAP1-4P0C5Y4 121 aa10.94□□□□□ -0.66
HMG20B-213ENST00000488973 Q6ZSA8 131 aa10.94□□□□□ -0.66
HMG20B-213ENST00000488973 LRP1BQ9NZR2 4599 aa10.91□□□□□ -0.66
HMG20B-213ENST00000488973 KRTAP10-1P60331 282 aa10.87□□□□□ -0.67
HMG20B-213ENST00000488973 PKD1P98161 4303 aa10.86□□□□□ -0.67
HMG20B-213ENST00000488973 SPINK1P00995 79 aa10.84□□□□□ -0.67
HMG20B-213ENST00000488973 P0C880 135 aa10.83□□□□□ -0.68
HMG20B-213ENST00000488973 TYMSOSQ8TAI1 123 aa10.8□□□□□ -0.68
HMG20B-213ENST00000488973 VPS13BQ7Z7G8 4022 aa10.8□□□□□ -0.68
HMG20B-213ENST00000488973 A8MUU9 505 aa10.79□□□□□ -0.68
HMG20B-213ENST00000488973 HYDINQ4G0P3 5121 aa10.79□□□□□ -0.68
HMG20B-213ENST00000488973 FAT2Q9NYQ8 4349 aa10.77□□□□□ -0.68
HMG20B-213ENST00000488973 Q8N1X5 172 aa10.75□□□□□ -0.69
HMG20B-213ENST00000488973 A0A0A0MQY5 61 aa10.73□□□□□ -0.69
HMG20B-213ENST00000488973 RPS29P62273 56 aaKnown RBP10.7□□□□□ -0.7
HMG20B-213ENST00000488973 LINC00304Q8N9R0 145 aa10.7□□□□□ -0.7
HMG20B-213ENST00000488973 SACSQ9NZJ4 4579 aa10.67□□□□□ -0.7
HMG20B-213ENST00000488973 H0YAA0 97 aa10.56□□□□□ -0.72
HMG20B-213ENST00000488973 A0A1B0GVY2 172 aa10.56□□□□□ -0.72
HMG20B-213ENST00000488973 C20orf166-AS1Q96NR2 134 aa10.56□□□□□ -0.72
HMG20B-213ENST00000488973 KRTAP3-1Q9BYR8 98 aa10.51□□□□□ -0.73
HMG20B-213ENST00000488973 A0A1B0GU33 70 aa10.49□□□□□ -0.73
HMG20B-213ENST00000488973 C9orf92A6NGG3 77 aa10.48□□□□□ -0.73
HMG20B-213ENST00000488973 H1FX-AS1Q4G0G2 97 aa10.45□□□□□ -0.74
HMG20B-213ENST00000488973 PKHD1P08F94 4074 aa10.43□□□□□ -0.74
HMG20B-213ENST00000488973 RYR2Q92736 4967 aa10.43□□□□□ -0.74
HMG20B-213ENST00000488973 PKHD1L1Q86WI1 4243 aa10.43□□□□□ -0.74
HMG20B-213ENST00000488973 DYNC1H1Q14204 4646 aaKnown RBP10.4□□□□□ -0.74
HMG20B-213ENST00000488973 NDUFAF8A1L188 74 aa10.39□□□□□ -0.75
HMG20B-213ENST00000488973 SPINT4Q6UDR6 99 aa10.38□□□□□ -0.75
HMG20B-213ENST00000488973 CRIPTQ9P021 101 aa10.35□□□□□ -0.75
HMG20B-213ENST00000488973 K7ERS5 55 aa10.34□□□□□ -0.75
HMG20B-213ENST00000488973 APOBP04114 4563 aaKnown RBP10.34□□□□□ -0.75
HMG20B-213ENST00000488973 KMT2CQ8NEZ4 4911 aaKnown RBP10.33□□□□□ -0.76
HMG20B-213ENST00000488973 SMR3BP02814 79 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms