RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 DNAH6Q9C0G6 4158 aa3.99□□□□□ -1.77
HDLBP-243ENST00000488923 STARD9Q9P2P6 4700 aa3.99□□□□□ -1.77
HDLBP-243ENST00000488923 CDK2AP2O75956 126 aa3.99□□□□□ -1.77
HDLBP-243ENST00000488923 CIRBP-AS1Q8TBR5 109 aa3.99□□□□□ -1.77
HDLBP-243ENST00000488923 LCE6AA0A183 80 aa3.98□□□□□ -1.77
HDLBP-243ENST00000488923 H3BPC8 53 aa3.98□□□□□ -1.77
HDLBP-243ENST00000488923 H7BZZ5 65 aa3.98□□□□□ -1.77
HDLBP-243ENST00000488923 MOBPQ13875 183 aa3.98□□□□□ -1.77
HDLBP-243ENST00000488923 FAM229BQ4G0N7 80 aa3.98□□□□□ -1.77
HDLBP-243ENST00000488923 FBN3Q75N90 2809 aa3.98□□□□□ -1.77
HDLBP-243ENST00000488923 ALMS1Q8TCU4 4167 aa3.97□□□□□ -1.77
HDLBP-243ENST00000488923 A0A0G2JQZ4 141 aa3.97□□□□□ -1.77
HDLBP-243ENST00000488923 CASC2Q6XLA1 102 aa3.97□□□□□ -1.77
HDLBP-243ENST00000488923 CSMD3Q7Z407 3707 aa3.96□□□□□ -1.77
HDLBP-243ENST00000488923 DNAH17Q9UFH2 4485 aa3.96□□□□□ -1.78
HDLBP-243ENST00000488923 MP68P56378 58 aa3.96□□□□□ -1.78
HDLBP-243ENST00000488923 Q75L30 129 aa3.96□□□□□ -1.78
HDLBP-243ENST00000488923 DEFB116Q30KQ4 102 aa3.95□□□□□ -1.78
HDLBP-243ENST00000488923 ASB16-AS1Q495Z4 193 aa3.95□□□□□ -1.78
HDLBP-243ENST00000488923 CYSTM1Q9H1C7 97 aa3.95□□□□□ -1.78
HDLBP-243ENST00000488923 TP53AIP1Q9HCN2 124 aa3.95□□□□□ -1.78
HDLBP-243ENST00000488923 SNURFQ9Y675 71 aa3.95□□□□□ -1.78
HDLBP-243ENST00000488923 KRTAP10-1P60331 282 aa3.94□□□□□ -1.78
HDLBP-243ENST00000488923 WFDC13Q8IUB5 93 aa3.94□□□□□ -1.78
HDLBP-243ENST00000488923 SERP1Q9Y6X1 66 aa3.94□□□□□ -1.78
HDLBP-243ENST00000488923 LYSTQ99698 3801 aa3.93□□□□□ -1.78
HDLBP-243ENST00000488923 DNAH2Q9P225 4427 aa3.93□□□□□ -1.78
HDLBP-243ENST00000488923 A0A1B0GVX0 72 aa3.93□□□□□ -1.78
HDLBP-243ENST00000488923 hDV103S1A0JD37 113 aa3.93□□□□□ -1.78
HDLBP-243ENST00000488923 C8orf87E5RJ46 101 aa3.93□□□□□ -1.78
HDLBP-243ENST00000488923 Q96NJ1 140 aa3.93□□□□□ -1.78
HDLBP-243ENST00000488923 TENM2Q9NT68 2774 aa3.93□□□□□ -1.78
HDLBP-243ENST00000488923 MMP24-AS1A0A0U1RRL7 71 aa3.92□□□□□ -1.78
HDLBP-243ENST00000488923 KRTAP10-7P60409 375 aaPredicted RBP3.92□□□□□ -1.78
HDLBP-243ENST00000488923 LIMD2Q9BT23 127 aa3.92□□□□□ -1.78
HDLBP-243ENST00000488923 ZCCHC13Q8WW36 166 aaKnown RBP3.91□□□□□ -1.78
HDLBP-243ENST00000488923 C8orf17Q9NRJ1 99 aa3.91□□□□□ -1.78
HDLBP-243ENST00000488923 RBM12B-AS1Q9P1G2 102 aa3.91□□□□□ -1.78
HDLBP-243ENST00000488923 H0Y9P7 68 aa3.9□□□□□ -1.79
HDLBP-243ENST00000488923 ANAPC11Q9NYG5 84 aa3.9□□□□□ -1.79
HDLBP-243ENST00000488923 IGHV6-1A0A0B4J1U7 121 aa3.89□□□□□ -1.79
HDLBP-243ENST00000488923 TRAV22A0A0B4J277 110 aa3.89□□□□□ -1.79
HDLBP-243ENST00000488923 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
HDLBP-243ENST00000488923 SPINK6Q6UWN8 80 aa3.89□□□□□ -1.79
HDLBP-243ENST00000488923 MRPL34Q9BQ48 92 aaKnown RBP3.89□□□□□ -1.79
HDLBP-243ENST00000488923 SPAG11AQ6PDA7 123 aa3.88□□□□□ -1.79
HDLBP-243ENST00000488923 SPANXA2-OT1Q8N9U9 137 aa3.88□□□□□ -1.79
HDLBP-243ENST00000488923 LINC00208Q96KT6 92 aa3.88□□□□□ -1.79
HDLBP-243ENST00000488923 SMIM26A0A096LP01 95 aa3.87□□□□□ -1.79
HDLBP-243ENST00000488923 KRTAP23-1A1A580 65 aa3.87□□□□□ -1.79
HDLBP-243ENST00000488923 SPINK1P00995 79 aa3.87□□□□□ -1.79
HDLBP-243ENST00000488923 RPS29P62273 56 aaKnown RBP3.87□□□□□ -1.79
HDLBP-243ENST00000488923 HECTD4Q9Y4D8 3996 aa3.86□□□□□ -1.79
HDLBP-243ENST00000488923 C1orf64Q8NEQ6 169 aa3.86□□□□□ -1.79
HDLBP-243ENST00000488923 TYMSOSQ8TAI1 123 aa3.86□□□□□ -1.79
HDLBP-243ENST00000488923 BRK1Q8WUW1 75 aa3.86□□□□□ -1.79
HDLBP-243ENST00000488923 CYP4F30PQ9H0H9 118 aa3.86□□□□□ -1.79
HDLBP-243ENST00000488923 KMT2AQ03164 3969 aa3.86□□□□□ -1.79
HDLBP-243ENST00000488923 DNAH8Q96JB1 4490 aa3.86□□□□□ -1.79
HDLBP-243ENST00000488923 NDUFS5O43920 106 aa3.85□□□□□ -1.79
HDLBP-243ENST00000488923 KRTAP1-4P0C5Y4 121 aa3.85□□□□□ -1.79
HDLBP-243ENST00000488923 SEC61BP60468 96 aaKnown RBP3.85□□□□□ -1.79
HDLBP-243ENST00000488923 KRTAP13-2Q52LG2 175 aa3.85□□□□□ -1.79
HDLBP-243ENST00000488923 KTN1-AS1Q86SY8 53 aa3.85□□□□□ -1.79
HDLBP-243ENST00000488923 DNAH11Q96DT5 4516 aa3.84□□□□□ -1.79
HDLBP-243ENST00000488923 A0A087X002 238 aa3.84□□□□□ -1.79
HDLBP-243ENST00000488923 A0A1B0GVY2 172 aa3.84□□□□□ -1.79
HDLBP-243ENST00000488923 LINC00313P59037 77 aa3.84□□□□□ -1.79
HDLBP-243ENST00000488923 TGP01266 2768 aa3.84□□□□□ -1.8
HDLBP-243ENST00000488923 LOC101927531A0A1B0GV80 90 aa3.83□□□□□ -1.8
HDLBP-243ENST00000488923 DNAH5Q8TE73 4624 aa3.81□□□□□ -1.8
HDLBP-243ENST00000488923 FRAS1Q86XX4 4008 aa3.81□□□□□ -1.8
HDLBP-243ENST00000488923 LINC00304Q8N9R0 145 aa3.81□□□□□ -1.8
HDLBP-243ENST00000488923 IGLV7-46A0A075B6I9 117 aa3.8□□□□□ -1.8
HDLBP-243ENST00000488923 Q8N9P0 234 aaPredicted RBP3.8□□□□□ -1.8
HDLBP-243ENST00000488923 FAT2Q9NYQ8 4349 aa3.79□□□□□ -1.8
HDLBP-243ENST00000488923 SRRM2Q9UQ35 2752 aaKnown RBP3.78□□□□□ -1.8
HDLBP-243ENST00000488923 KRTAP10-6P60371 365 aaPredicted RBP3.78□□□□□ -1.8
HDLBP-243ENST00000488923 LCE1AQ5T7P2 110 aa3.78□□□□□ -1.8
HDLBP-243ENST00000488923 PKD1P98161 4303 aa3.77□□□□□ -1.81
HDLBP-243ENST00000488923 LCA10Q71F78 164 aa3.77□□□□□ -1.81
HDLBP-243ENST00000488923 NOTCH2NLQ7Z3S9 236 aa3.77□□□□□ -1.81
HDLBP-243ENST00000488923 A8MUN3 132 aa3.76□□□□□ -1.81
HDLBP-243ENST00000488923 HYDINQ4G0P3 5121 aa3.76□□□□□ -1.81
HDLBP-243ENST00000488923 SACSQ9NZJ4 4579 aa3.75□□□□□ -1.81
HDLBP-243ENST00000488923 SMR3BP02814 79 aaPredicted RBP3.75□□□□□ -1.81
HDLBP-243ENST00000488923 KRTAP13-3Q3SY46 172 aa3.75□□□□□ -1.81
HDLBP-243ENST00000488923 FP248Q71RG6 208 aaPredicted RBP3.75□□□□□ -1.81
HDLBP-243ENST00000488923 LRP1BQ9NZR2 4599 aa3.75□□□□□ -1.81
HDLBP-243ENST00000488923 KRTAP16-1A8MUX0 517 aa3.74□□□□□ -1.81
HDLBP-243ENST00000488923 KRTAP10-4P60372 401 aaPredicted RBP3.74□□□□□ -1.81
HDLBP-243ENST00000488923 PRR4Q16378 134 aa3.74□□□□□ -1.81
HDLBP-243ENST00000488923 Q1T7F1 81 aa3.74□□□□□ -1.81
HDLBP-243ENST00000488923 PCOTHQ58A44 107 aa3.74□□□□□ -1.81
HDLBP-243ENST00000488923 PSPHP1O15172 72 aa3.73□□□□□ -1.81
HDLBP-243ENST00000488923 IGKV2-30P06310 120 aa3.72□□□□□ -1.81
HDLBP-243ENST00000488923 Q5W150 140 aa3.72□□□□□ -1.81
HDLBP-243ENST00000488923 ACYP2P14621 99 aa3.71□□□□□ -1.82
HDLBP-243ENST00000488923 COA5Q86WW8 74 aa3.71□□□□□ -1.82
HDLBP-243ENST00000488923 DYNC1H1Q14204 4646 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms