RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 PKHD1L1Q86WI1 4243 aa4.41□□□□□ -1.7
APOBEC3A-203ENST00000488758 LINC00304Q8N9R0 145 aa4.4□□□□□ -1.71
APOBEC3A-203ENST00000488758 SPINK1P00995 79 aa4.39□□□□□ -1.71
APOBEC3A-203ENST00000488758 KRTAP10-8P60410 259 aa4.39□□□□□ -1.71
APOBEC3A-203ENST00000488758 SS18L2Q9UHA2 77 aa4.39□□□□□ -1.71
APOBEC3A-203ENST00000488758 FLG2Q5D862 2391 aaPredicted RBP4.38□□□□□ -1.71
APOBEC3A-203ENST00000488758 OXTP01178 125 aa4.38□□□□□ -1.71
APOBEC3A-203ENST00000488758 Q6ZVQ6 151 aa4.38□□□□□ -1.71
APOBEC3A-203ENST00000488758 LIMD2Q9BT23 127 aa4.38□□□□□ -1.71
APOBEC3A-203ENST00000488758 MYCBP2O75592 4640 aa4.36□□□□□ -1.71
APOBEC3A-203ENST00000488758 LINC00643Q86TS7 51 aa4.36□□□□□ -1.71
APOBEC3A-203ENST00000488758 BPY2O14599 106 aa4.35□□□□□ -1.71
APOBEC3A-203ENST00000488758 PCP4P48539 62 aa4.35□□□□□ -1.71
APOBEC3A-203ENST00000488758 RPS29P62273 56 aaKnown RBP4.35□□□□□ -1.71
APOBEC3A-203ENST00000488758 Q5XG85 94 aa4.35□□□□□ -1.71
APOBEC3A-203ENST00000488758 KRTAP29-1A8MX34 341 aaPredicted RBP4.34□□□□□ -1.71
APOBEC3A-203ENST00000488758 DEFB116Q30KQ4 102 aa4.34□□□□□ -1.71
APOBEC3A-203ENST00000488758 ASB16-AS1Q495Z4 193 aa4.34□□□□□ -1.71
APOBEC3A-203ENST00000488758 SIGMAR1Q99720 223 aa4.34□□□□□ -1.71
APOBEC3A-203ENST00000488758 LINC00472Q9H8W2 130 aa4.34□□□□□ -1.71
APOBEC3A-203ENST00000488758 IGKV3D-7A0A0C4DH55 119 aa4.33□□□□□ -1.72
APOBEC3A-203ENST00000488758 J3KT08 172 aa4.33□□□□□ -1.72
APOBEC3A-203ENST00000488758 IGKV4-1P06312 121 aa4.33□□□□□ -1.72
APOBEC3A-203ENST00000488758 MT1HL1P0DM35 61 aa4.32□□□□□ -1.72
APOBEC3A-203ENST00000488758 CXCL6P80162 114 aa4.32□□□□□ -1.72
APOBEC3A-203ENST00000488758 ATP5EP2Q5VTU8 51 aa4.32□□□□□ -1.72
APOBEC3A-203ENST00000488758 NDUFB1O75438 58 aa4.31□□□□□ -1.72
APOBEC3A-203ENST00000488758 C1orf195Q5TG92 126 aa4.31□□□□□ -1.72
APOBEC3A-203ENST00000488758 MT-ATP8P03928 68 aa4.3□□□□□ -1.72
APOBEC3A-203ENST00000488758 Q96NJ1 140 aa4.3□□□□□ -1.72
APOBEC3A-203ENST00000488758 FAT3Q8TDW7 4589 aa4.3□□□□□ -1.72
APOBEC3A-203ENST00000488758 LRP1Q07954 4544 aaKnown RBP4.3□□□□□ -1.72
APOBEC3A-203ENST00000488758 DSCR10P59022 87 aa4.29□□□□□ -1.72
APOBEC3A-203ENST00000488758 HIST1H4AP62805 103 aaKnown RBP4.29□□□□□ -1.72
APOBEC3A-203ENST00000488758 A8MWP4 228 aa4.28□□□□□ -1.72
APOBEC3A-203ENST00000488758 HMCN2Q8NDA2 5059 aa4.28□□□□□ -1.72
APOBEC3A-203ENST00000488758 Q8N9L7 120 aa4.27□□□□□ -1.73
APOBEC3A-203ENST00000488758 IMUPQ9GZP8 106 aa4.27□□□□□ -1.73
APOBEC3A-203ENST00000488758 IGHV6-1A0A0B4J1U7 121 aa4.26□□□□□ -1.73
APOBEC3A-203ENST00000488758 A0A1B0GVX0 72 aa4.26□□□□□ -1.73
APOBEC3A-203ENST00000488758 K7EQZ3 153 aa4.26□□□□□ -1.73
APOBEC3A-203ENST00000488758 PRR15Q8IV56 129 aa4.26□□□□□ -1.73
APOBEC3A-203ENST00000488758 RETNLBQ9BQ08 111 aa4.26□□□□□ -1.73
APOBEC3A-203ENST00000488758 TNXBP22105 4242 aa4.26□□□□□ -1.73
APOBEC3A-203ENST00000488758 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
APOBEC3A-203ENST00000488758 FP248Q71RG6 208 aaPredicted RBP4.24□□□□□ -1.73
APOBEC3A-203ENST00000488758 A0A087WVE0 104 aa4.23□□□□□ -1.73
APOBEC3A-203ENST00000488758 C8orf87E5RJ46 101 aa4.23□□□□□ -1.73
APOBEC3A-203ENST00000488758 LINC00313P59037 77 aa4.23□□□□□ -1.73
APOBEC3A-203ENST00000488758 PRR4Q16378 134 aa4.23□□□□□ -1.73
APOBEC3A-203ENST00000488758 IGLV7-46A0A075B6I9 117 aa4.22□□□□□ -1.73
APOBEC3A-203ENST00000488758 HCG22E2RYF7 251 aa4.22□□□□□ -1.73
APOBEC3A-203ENST00000488758 C8orf17Q9NRJ1 99 aa4.22□□□□□ -1.73
APOBEC3A-203ENST00000488758 CASC2Q6XLA1 102 aa4.21□□□□□ -1.74
APOBEC3A-203ENST00000488758 WFDC13Q8IUB5 93 aa4.21□□□□□ -1.74
APOBEC3A-203ENST00000488758 MMP24-AS1A0A0U1RRL7 71 aa4.2□□□□□ -1.74
APOBEC3A-203ENST00000488758 hDV103S1A0JD37 113 aa4.2□□□□□ -1.74
APOBEC3A-203ENST00000488758 SCGB1A1P11684 91 aa4.2□□□□□ -1.74
APOBEC3A-203ENST00000488758 NOTCH2NLQ7Z3S9 236 aa4.2□□□□□ -1.74
APOBEC3A-203ENST00000488758 FAM236AA0A1B0GUQ0 79 aa4.19□□□□□ -1.74
APOBEC3A-203ENST00000488758 FAM236BA0A1B0GV22 79 aa4.19□□□□□ -1.74
APOBEC3A-203ENST00000488758 C9orf92A6NGG3 77 aa4.18□□□□□ -1.74
APOBEC3A-203ENST00000488758 TMEM254Q8TBM7 123 aa4.18□□□□□ -1.74
APOBEC3A-203ENST00000488758 MRPL34Q9BQ48 92 aaKnown RBP4.18□□□□□ -1.74
APOBEC3A-203ENST00000488758 RNF213Q63HN8 5207 aa4.17□□□□□ -1.74
APOBEC3A-203ENST00000488758 NDUFS5O43920 106 aa4.16□□□□□ -1.74
APOBEC3A-203ENST00000488758 ATOX1O00244 68 aa4.15□□□□□ -1.75
APOBEC3A-203ENST00000488758 KRTAP16-1A8MUX0 517 aa4.14□□□□□ -1.75
APOBEC3A-203ENST00000488758 KRTAP13-3Q3SY46 172 aa4.14□□□□□ -1.75
APOBEC3A-203ENST00000488758 SMIM20Q8N5G0 67 aa4.14□□□□□ -1.75
APOBEC3A-203ENST00000488758 TPRXLQ17RH7 258 aa4.13□□□□□ -1.75
APOBEC3A-203ENST00000488758 Q8N9P0 234 aaPredicted RBP4.13□□□□□ -1.75
APOBEC3A-203ENST00000488758 TP53AIP1Q9HCN2 124 aa4.12□□□□□ -1.75
APOBEC3A-203ENST00000488758 TRAV7A0A075B6U4 112 aa4.11□□□□□ -1.75
APOBEC3A-203ENST00000488758 UQCRQO14949 82 aa4.11□□□□□ -1.75
APOBEC3A-203ENST00000488758 KRTAP5-3Q6L8H2 238 aa4.11□□□□□ -1.75
APOBEC3A-203ENST00000488758 A8MUU9 505 aa4.1□□□□□ -1.75
APOBEC3A-203ENST00000488758 C20orf166-AS1Q96NR2 134 aa4.1□□□□□ -1.75
APOBEC3A-203ENST00000488758 ANAPC13Q9BS18 74 aa4.1□□□□□ -1.75
APOBEC3A-203ENST00000488758 Q75L30 129 aa4.09□□□□□ -1.75
APOBEC3A-203ENST00000488758 SERP2Q8N6R1 65 aa4.09□□□□□ -1.75
APOBEC3A-203ENST00000488758 OCR1Q9BZK8 76 aa4.09□□□□□ -1.75
APOBEC3A-203ENST00000488758 C5orf47Q569G3 176 aa4.08□□□□□ -1.76
APOBEC3A-203ENST00000488758 ATP11AUNQ6ZP68 121 aa4.08□□□□□ -1.76
APOBEC3A-203ENST00000488758 LRP2P98164 4655 aa4.08□□□□□ -1.76
APOBEC3A-203ENST00000488758 MP68P56378 58 aa4.07□□□□□ -1.76
APOBEC3A-203ENST00000488758 RPL37P61927 97 aaKnown RBP4.07□□□□□ -1.76
APOBEC3A-203ENST00000488758 ZCCHC13Q8WW36 166 aaKnown RBP4.07□□□□□ -1.76
APOBEC3A-203ENST00000488758 TRAV22A0A0B4J277 110 aa4.06□□□□□ -1.76
APOBEC3A-203ENST00000488758 H0Y9P7 68 aa4.06□□□□□ -1.76
APOBEC3A-203ENST00000488758 Q5W150 140 aa4.06□□□□□ -1.76
APOBEC3A-203ENST00000488758 COX7CP15954 63 aa4.05□□□□□ -1.76
APOBEC3A-203ENST00000488758 H3BPC8 53 aa4.03□□□□□ -1.76
APOBEC3A-203ENST00000488758 SEC61BP60468 96 aaKnown RBP4.03□□□□□ -1.76
APOBEC3A-203ENST00000488758 LINC00208Q96KT6 92 aa4.03□□□□□ -1.76
APOBEC3A-203ENST00000488758 PCOTHQ58A44 107 aa4.02□□□□□ -1.77
APOBEC3A-203ENST00000488758 C20orf197Q8N268 126 aa4.02□□□□□ -1.77
APOBEC3A-203ENST00000488758 LOC101927531A0A1B0GV80 90 aa4.01□□□□□ -1.77
APOBEC3A-203ENST00000488758 C1orf64Q8NEQ6 169 aa4.01□□□□□ -1.77
APOBEC3A-203ENST00000488758 IGKV2D-30A0A075B6S6 120 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms