RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 TP53AIP1Q9HCN2 124 aa3.83□□□□□ -1.8
SIK3-212ENST00000488337 DNAH10OSP0CZ25 163 aa3.83□□□□□ -1.8
SIK3-212ENST00000488337 XP32Q5T750 250 aa3.83□□□□□ -1.8
SIK3-212ENST00000488337 UQCR11O14957 56 aa3.83□□□□□ -1.8
SIK3-212ENST00000488337 PRLHP81277 87 aa3.83□□□□□ -1.8
SIK3-212ENST00000488337 KRTAP26-1Q6PEX3 210 aa3.83□□□□□ -1.8
SIK3-212ENST00000488337 IGFL1Q6UW32 110 aa3.83□□□□□ -1.8
SIK3-212ENST00000488337 KRTAP10-11P60412 298 aa3.82□□□□□ -1.8
SIK3-212ENST00000488337 TENM3Q9P273 2699 aa3.82□□□□□ -1.8
SIK3-212ENST00000488337 DMAC1Q96GE9 116 aa3.82□□□□□ -1.8
SIK3-212ENST00000488337 TENM1Q9UKZ4 2725 aa3.82□□□□□ -1.8
SIK3-212ENST00000488337 KRTAP16-1A8MUX0 517 aa3.81□□□□□ -1.8
SIK3-212ENST00000488337 KRTAP21-3Q3LHN1 58 aa3.81□□□□□ -1.8
SIK3-212ENST00000488337 ZNF469Q96JG9 3925 aaPredicted RBP3.81□□□□□ -1.8
SIK3-212ENST00000488337 ACYP2P14621 99 aa3.81□□□□□ -1.8
SIK3-212ENST00000488337 KRTAP13-3Q3SY46 172 aa3.81□□□□□ -1.8
SIK3-212ENST00000488337 PKD1L1Q8TDX9 2849 aa3.81□□□□□ -1.8
SIK3-212ENST00000488337 TLX1NBP0CAT3 122 aa3.8□□□□□ -1.8
SIK3-212ENST00000488337 PLA2G2DQ9UNK4 145 aa3.8□□□□□ -1.8
SIK3-212ENST00000488337 A0A0G2JQZ4 141 aa3.8□□□□□ -1.8
SIK3-212ENST00000488337 A0A1W2PNN7 141 aa3.8□□□□□ -1.8
SIK3-212ENST00000488337 KRTAP15-1Q3LI76 137 aa3.79□□□□□ -1.8
SIK3-212ENST00000488337 C20orf166-AS1Q96NR2 134 aa3.79□□□□□ -1.8
SIK3-212ENST00000488337 SPINK1P00995 79 aa3.79□□□□□ -1.8
SIK3-212ENST00000488337 CASC10Q5T4H9 136 aa3.78□□□□□ -1.8
SIK3-212ENST00000488337 SEC61BP60468 96 aaKnown RBP3.78□□□□□ -1.8
SIK3-212ENST00000488337 LINC00304Q8N9R0 145 aa3.78□□□□□ -1.8
SIK3-212ENST00000488337 PDZD2O15018 2839 aa3.77□□□□□ -1.81
SIK3-212ENST00000488337 SRRM2Q9UQ35 2752 aaKnown RBP3.77□□□□□ -1.81
SIK3-212ENST00000488337 NBDYA0A0U1RRE5 68 aa3.77□□□□□ -1.81
SIK3-212ENST00000488337 A0A087WTM6 91 aa3.76□□□□□ -1.81
SIK3-212ENST00000488337 ANK3Q12955 4377 aaKnown RBP3.76□□□□□ -1.81
SIK3-212ENST00000488337 CIRBP-AS1Q8TBR5 109 aa3.76□□□□□ -1.81
SIK3-212ENST00000488337 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.76□□□□□ -1.81
SIK3-212ENST00000488337 DNAH1Q9P2D7 4330 aa3.76□□□□□ -1.81
SIK3-212ENST00000488337 IGLV7-43P04211 117 aa3.76□□□□□ -1.81
SIK3-212ENST00000488337 KRTAP7-1Q8IUC3 87 aa3.75□□□□□ -1.81
SIK3-212ENST00000488337 Q96NJ1 140 aa3.75□□□□□ -1.81
SIK3-212ENST00000488337 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
SIK3-212ENST00000488337 Q5W150 140 aa3.74□□□□□ -1.81
SIK3-212ENST00000488337 CHTF8P0CG12 524 aa3.73□□□□□ -1.81
SIK3-212ENST00000488337 IGKV2D-30A0A075B6S6 120 aa3.72□□□□□ -1.81
SIK3-212ENST00000488337 IGKV2-30P06310 120 aa3.72□□□□□ -1.81
SIK3-212ENST00000488337 TRRAPQ9Y4A5 3859 aa3.72□□□□□ -1.81
SIK3-212ENST00000488337 MRPL34Q9BQ48 92 aaKnown RBP3.71□□□□□ -1.82
SIK3-212ENST00000488337 FBN1P35555 2871 aaKnown RBP3.7□□□□□ -1.82
SIK3-212ENST00000488337 C8orf17Q9NRJ1 99 aa3.69□□□□□ -1.82
SIK3-212ENST00000488337 H0YAA0 97 aa3.69□□□□□ -1.82
SIK3-212ENST00000488337 SPINT4Q6UDR6 99 aa3.69□□□□□ -1.82
SIK3-212ENST00000488337 SPRR1BP22528 89 aa3.68□□□□□ -1.82
SIK3-212ENST00000488337 SSBP3-AS1Q7Z2R9 100 aa3.68□□□□□ -1.82
SIK3-212ENST00000488337 KRTAP11-1Q8IUC1 163 aa3.68□□□□□ -1.82
SIK3-212ENST00000488337 SPACA4Q8TDM5 124 aa3.66□□□□□ -1.82
SIK3-212ENST00000488337 APLNQ9ULZ1 77 aa3.66□□□□□ -1.82
SIK3-212ENST00000488337 A0A1B0GVX0 72 aa3.65□□□□□ -1.82
SIK3-212ENST00000488337 SMR3BP02814 79 aaPredicted RBP3.65□□□□□ -1.83
SIK3-212ENST00000488337 ANK2Q01484 3957 aa3.64□□□□□ -1.83
SIK3-212ENST00000488337 Q6ZSA8 131 aa3.64□□□□□ -1.83
SIK3-212ENST00000488337 FRAS1Q86XX4 4008 aa3.64□□□□□ -1.83
SIK3-212ENST00000488337 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
SIK3-212ENST00000488337 KRTAP1-5Q9BYS1 174 aa3.63□□□□□ -1.83
SIK3-212ENST00000488337 ANAPC11Q9NYG5 84 aa3.63□□□□□ -1.83
SIK3-212ENST00000488337 PANO1I0J062 215 aa3.62□□□□□ -1.83
SIK3-212ENST00000488337 LYSTQ99698 3801 aa3.62□□□□□ -1.83
SIK3-212ENST00000488337 TPRXLQ17RH7 258 aa3.61□□□□□ -1.83
SIK3-212ENST00000488337 PSORS1C2Q9UIG4 136 aa3.6□□□□□ -1.83
SIK3-212ENST00000488337 CRIPTQ9P021 101 aa3.58□□□□□ -1.84
SIK3-212ENST00000488337 COL7A1Q02388 2944 aa3.56□□□□□ -1.84
SIK3-212ENST00000488337 TYMSOSQ8TAI1 123 aa3.55□□□□□ -1.84
SIK3-212ENST00000488337 MEGF8Q7Z7M0 2845 aa3.54□□□□□ -1.84
SIK3-212ENST00000488337 TGP01266 2768 aa3.54□□□□□ -1.84
SIK3-212ENST00000488337 KRTAP13-1Q8IUC0 172 aa3.54□□□□□ -1.84
SIK3-212ENST00000488337 Q8N1X5 172 aa3.52□□□□□ -1.85
SIK3-212ENST00000488337 FBN3Q75N90 2809 aa3.51□□□□□ -1.85
SIK3-212ENST00000488337 A0A1B0GU33 70 aa3.5□□□□□ -1.85
SIK3-212ENST00000488337 C9orf92A6NGG3 77 aa3.49□□□□□ -1.85
SIK3-212ENST00000488337 H1FX-AS1Q4G0G2 97 aa3.49□□□□□ -1.85
SIK3-212ENST00000488337 Q6ZRN7 208 aaPredicted RBP3.47□□□□□ -1.85
SIK3-212ENST00000488337 A0A0D9SG42 100 aa3.47□□□□□ -1.85
SIK3-212ENST00000488337 DNAH10Q8IVF4 4471 aa3.47□□□□□ -1.85
SIK3-212ENST00000488337 Q5VSD8 79 aa3.47□□□□□ -1.85
SIK3-212ENST00000488337 DNAH8Q96JB1 4490 aa3.46□□□□□ -1.86
SIK3-212ENST00000488337 COX6B2Q6YFQ2 88 aa3.45□□□□□ -1.86
SIK3-212ENST00000488337 C10orf95Q9H7T3 257 aa3.43□□□□□ -1.86
SIK3-212ENST00000488337 VPS13DQ5THJ4 4388 aa3.43□□□□□ -1.86
SIK3-212ENST00000488337 KRTAP10-2P60368 255 aa3.42□□□□□ -1.86
SIK3-212ENST00000488337 CAMK2N1Q7Z7J9 78 aa3.41□□□□□ -1.86
SIK3-212ENST00000488337 DNAH17Q9UFH2 4485 aa3.41□□□□□ -1.86
SIK3-212ENST00000488337 KRTAP10-1P60331 282 aa3.4□□□□□ -1.86
SIK3-212ENST00000488337 DNAH9Q9NYC9 4486 aa3.4□□□□□ -1.86
SIK3-212ENST00000488337 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.4□□□□□ -1.87
SIK3-212ENST00000488337 KRTAP23-1A1A580 65 aa3.39□□□□□ -1.87
SIK3-212ENST00000488337 DNAH7Q8WXX0 4024 aa3.39□□□□□ -1.87
SIK3-212ENST00000488337 HUWE1Q7Z6Z7 4374 aaKnown RBP3.37□□□□□ -1.87
SIK3-212ENST00000488337 KRTAP4-8Q9BYQ9 185 aa3.37□□□□□ -1.87
SIK3-212ENST00000488337 DNAH6Q9C0G6 4158 aa3.37□□□□□ -1.87
SIK3-212ENST00000488337 KRTAP9-6A0A140TA67 174 aa3.37□□□□□ -1.87
SIK3-212ENST00000488337 KMT2AQ03164 3969 aa3.37□□□□□ -1.87
SIK3-212ENST00000488337 RPL37P61927 97 aaKnown RBP3.36□□□□□ -1.87
SIK3-212ENST00000488337 KRTAP9-8Q9BYQ0 159 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms