RNA–Protein interactions for RNA: ENST00000488032.1

PCGF3-212, Transcript of polycomb group ring finger 3, humanhuman

TSL 4

Gene PCGF3, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-212ENST00000488032 PTPN13Q12923 2485 aa1.86□□□□□ -2.11
PCGF3-212ENST00000488032 FRYLO94915 3013 aa1.86□□□□□ -2.11
PCGF3-212ENST00000488032 SZT2Q5T011 3432 aa1.86□□□□□ -2.11
PCGF3-212ENST00000488032 ITPR1Q14643 2758 aa1.86□□□□□ -2.11
PCGF3-212ENST00000488032 MKI67P46013 3256 aaKnown RBP1.85□□□□□ -2.11
PCGF3-212ENST00000488032 C9orf92A6NGG3 77 aa1.84□□□□□ -2.11
PCGF3-212ENST00000488032 KRTAP10-1P60331 282 aa1.84□□□□□ -2.11
PCGF3-212ENST00000488032 PKD1L2Q7Z442 2459 aa1.84□□□□□ -2.12
PCGF3-212ENST00000488032 AKAP9Q99996 3911 aa1.84□□□□□ -2.12
PCGF3-212ENST00000488032 DEFB4AO15263 64 aa1.83□□□□□ -2.12
PCGF3-212ENST00000488032 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
PCGF3-212ENST00000488032 LCE1BQ5T7P3 118 aa1.83□□□□□ -2.12
PCGF3-212ENST00000488032 SONP18583 2426 aaKnown RBP1.83□□□□□ -2.12
PCGF3-212ENST00000488032 SPEGQ15772 3267 aa1.82□□□□□ -2.12
PCGF3-212ENST00000488032 TTC28Q96AY4 2481 aa1.82□□□□□ -2.12
PCGF3-212ENST00000488032 DCHS1Q96JQ0 3298 aa1.82□□□□□ -2.12
PCGF3-212ENST00000488032 WDFY4Q6ZS81 3184 aa1.82□□□□□ -2.12
PCGF3-212ENST00000488032 SPTBN5Q9NRC6 3674 aaKnown RBP1.81□□□□□ -2.12
PCGF3-212ENST00000488032 HIVEP3Q5T1R4 2406 aa1.81□□□□□ -2.12
PCGF3-212ENST00000488032 BOD1L1Q8NFC6 3051 aa1.81□□□□□ -2.12
PCGF3-212ENST00000488032 UNC80Q8N2C7 3258 aa1.8□□□□□ -2.12
PCGF3-212ENST00000488032 VWFP04275 2813 aa1.8□□□□□ -2.12
PCGF3-212ENST00000488032 SPTAN1Q13813 2472 aaKnown RBP1.8□□□□□ -2.12
PCGF3-212ENST00000488032 SRRM2Q9UQ35 2752 aaKnown RBP1.8□□□□□ -2.12
PCGF3-212ENST00000488032 CELSR1Q9NYQ6 3014 aa1.8□□□□□ -2.12
PCGF3-212ENST00000488032 RIF1Q5UIP0 2472 aaKnown RBP1.79□□□□□ -2.12
PCGF3-212ENST00000488032 HTTP42858 3142 aa1.78□□□□□ -2.12
PCGF3-212ENST00000488032 TRIOO75962 3097 aa1.78□□□□□ -2.12
PCGF3-212ENST00000488032 DOPEY1Q5JWR5 2465 aa1.78□□□□□ -2.12
PCGF3-212ENST00000488032 ABCA12Q86UK0 2595 aa1.78□□□□□ -2.12
PCGF3-212ENST00000488032 SETD2Q9BYW2 2564 aaPredicted RBP1.77□□□□□ -2.13
PCGF3-212ENST00000488032 TLN1Q9Y490 2541 aaKnown RBP1.77□□□□□ -2.13
PCGF3-212ENST00000488032 DMBT1Q9UGM3 2413 aaPredicted RBP1.77□□□□□ -2.13
PCGF3-212ENST00000488032 NBPF19A0A087WUL8 3843 aa1.77□□□□□ -2.13
PCGF3-212ENST00000488032 KALRNO60229 2985 aa1.77□□□□□ -2.13
PCGF3-212ENST00000488032 TRANK1O15050 2925 aa1.77□□□□□ -2.13
PCGF3-212ENST00000488032 CRYBG3Q68DQ2 2970 aa1.76□□□□□ -2.13
PCGF3-212ENST00000488032 CENPEQ02224 2701 aa1.76□□□□□ -2.13
PCGF3-212ENST00000488032 DMXL1Q9Y485 3027 aa1.76□□□□□ -2.13
PCGF3-212ENST00000488032 LRRK2Q5S007 2527 aa1.76□□□□□ -2.13
PCGF3-212ENST00000488032 AKAP13Q12802 2813 aa1.76□□□□□ -2.13
PCGF3-212ENST00000488032 LRBAP50851 2863 aa1.75□□□□□ -2.13
PCGF3-212ENST00000488032 EP400Q96L91 3159 aa1.75□□□□□ -2.13
PCGF3-212ENST00000488032 C5orf42Q9H799 3197 aa1.75□□□□□ -2.13
PCGF3-212ENST00000488032 MEGF8Q7Z7M0 2845 aa1.74□□□□□ -2.13
PCGF3-212ENST00000488032 DNAH11Q96DT5 4516 aa1.74□□□□□ -2.13
PCGF3-212ENST00000488032 FBN1P35555 2871 aaKnown RBP1.74□□□□□ -2.13
PCGF3-212ENST00000488032 CHD9Q3L8U1 2897 aa1.73□□□□□ -2.13
PCGF3-212ENST00000488032 ZFHX4Q86UP3 3567 aa1.73□□□□□ -2.13
PCGF3-212ENST00000488032 COL12A1Q99715 3063 aa1.72□□□□□ -2.13
PCGF3-212ENST00000488032 USP34Q70CQ2 3546 aa1.72□□□□□ -2.13
PCGF3-212ENST00000488032 LAMA2P24043 3122 aaKnown RBP1.72□□□□□ -2.13
PCGF3-212ENST00000488032 DMDP11532 3685 aa1.72□□□□□ -2.13
PCGF3-212ENST00000488032 LAMA1P25391 3075 aa1.72□□□□□ -2.13
PCGF3-212ENST00000488032 TLN2Q9Y4G6 2542 aa1.71□□□□□ -2.14
PCGF3-212ENST00000488032 FREM2Q5SZK8 3169 aa1.71□□□□□ -2.14
PCGF3-212ENST00000488032 DNAH12Q6ZR08 3092 aa1.71□□□□□ -2.14
PCGF3-212ENST00000488032 UTP20O75691 2785 aaKnown RBP1.7□□□□□ -2.14
PCGF3-212ENST00000488032 CACNA1AO00555 2505 aa1.7□□□□□ -2.14
PCGF3-212ENST00000488032 CELSR3Q9NYQ7 3312 aa1.69□□□□□ -2.14
PCGF3-212ENST00000488032 ACANP16112 2415 aa1.69□□□□□ -2.14
PCGF3-212ENST00000488032 FRYQ5TBA9 3013 aa1.69□□□□□ -2.14
PCGF3-212ENST00000488032 USP9XQ93008 2570 aaPredicted RBP1.68□□□□□ -2.14
PCGF3-212ENST00000488032 KRTAP5-2Q701N4 177 aa1.68□□□□□ -2.14
PCGF3-212ENST00000488032 APCP25054 2843 aa1.67□□□□□ -2.14
PCGF3-212ENST00000488032 XIRP2A4UGR9 3374 aa1.67□□□□□ -2.14
PCGF3-212ENST00000488032 M0R2T5 61 aa1.67□□□□□ -2.14
PCGF3-212ENST00000488032 SMR3AQ99954 134 aa1.67□□□□□ -2.14
PCGF3-212ENST00000488032 ATMQ13315 3056 aa1.66□□□□□ -2.14
PCGF3-212ENST00000488032 RELNP78509 3460 aa1.66□□□□□ -2.14
PCGF3-212ENST00000488032 DNAH14Q0VDD8 3507 aa1.66□□□□□ -2.14
PCGF3-212ENST00000488032 FRAS1Q86XX4 4008 aa1.65□□□□□ -2.14
PCGF3-212ENST00000488032 DNAH8Q96JB1 4490 aa1.65□□□□□ -2.14
PCGF3-212ENST00000488032 CFAP46Q8IYW2 2715 aa1.65□□□□□ -2.15
PCGF3-212ENST00000488032 PIEZO1Q92508 2521 aa1.65□□□□□ -2.15
PCGF3-212ENST00000488032 TGP01266 2768 aa1.64□□□□□ -2.15
PCGF3-212ENST00000488032 EPG5Q9HCE0 2579 aa1.64□□□□□ -2.15
PCGF3-212ENST00000488032 DNAH1Q9P2D7 4330 aa1.64□□□□□ -2.15
PCGF3-212ENST00000488032 CHD8Q9HCK8 2581 aa1.64□□□□□ -2.15
PCGF3-212ENST00000488032 NF1P21359 2839 aa1.64□□□□□ -2.15
PCGF3-212ENST00000488032 LOC400499M0QZD8 3231 aa1.64□□□□□ -2.15
PCGF3-212ENST00000488032 MTORP42345 2549 aa1.64□□□□□ -2.15
PCGF3-212ENST00000488032 WDFY3Q8IZQ1 3526 aa1.63□□□□□ -2.15
PCGF3-212ENST00000488032 COL7A1Q02388 2944 aa1.63□□□□□ -2.15
PCGF3-212ENST00000488032 HECTD1Q9ULT8 2610 aa1.63□□□□□ -2.15
PCGF3-212ENST00000488032 SETXQ7Z333 2677 aaKnown RBP1.63□□□□□ -2.15
PCGF3-212ENST00000488032 MYCBP2O75592 4640 aa1.62□□□□□ -2.15
PCGF3-212ENST00000488032 HELZ2Q9BYK8 2649 aaKnown RBP1.62□□□□□ -2.15
PCGF3-212ENST00000488032 NIPBLQ6KC79 2804 aaeCLIP1.62□□□□□ -2.15
PCGF3-212ENST00000488032 J3QKU1 62 aa1.62□□□□□ -2.15
PCGF3-212ENST00000488032 KRTAP12-4P60329 112 aa1.62□□□□□ -2.15
PCGF3-212ENST00000488032 BSNQ9UPA5 3926 aa1.62□□□□□ -2.15
PCGF3-212ENST00000488032 USP24Q9UPU5 2620 aa1.62□□□□□ -2.15
PCGF3-212ENST00000488032 ITPR3Q14573 2671 aa1.62□□□□□ -2.15
PCGF3-212ENST00000488032 CSMD1Q96PZ7 3565 aa1.62□□□□□ -2.15
PCGF3-212ENST00000488032 DNAH2Q9P225 4427 aa1.61□□□□□ -2.15
PCGF3-212ENST00000488032 VCANP13611 3396 aa1.61□□□□□ -2.15
PCGF3-212ENST00000488032 TEX15Q9BXT5 2789 aa1.61□□□□□ -2.15
PCGF3-212ENST00000488032 SPENQ96T58 3664 aaKnown RBP1.61□□□□□ -2.15
PCGF3-212ENST00000488032 ZNF292O60281 2723 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms