RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 C9orf153Q5TBE3 101 aa2.14□□□□□ -2.07
BRCA1-217ENST00000487825 CNFNQ9BYD5 112 aa2.14□□□□□ -2.07
BRCA1-217ENST00000487825 A0A087WXM4 84 aa2.13□□□□□ -2.07
BRCA1-217ENST00000487825 POLR2KP53803 58 aaKnown RBP2.13□□□□□ -2.07
BRCA1-217ENST00000487825 Q8NDZ9 215 aa2.13□□□□□ -2.07
BRCA1-217ENST00000487825 LIMD2Q9BT23 127 aa2.13□□□□□ -2.07
BRCA1-217ENST00000487825 VAMP8Q9BV40 100 aa2.13□□□□□ -2.07
BRCA1-217ENST00000487825 PRO1933Q9H354 126 aa2.13□□□□□ -2.07
BRCA1-217ENST00000487825 ST20Q9HBF5 79 aa2.13□□□□□ -2.07
BRCA1-217ENST00000487825 V9GYH0 126 aa2.13□□□□□ -2.07
BRCA1-217ENST00000487825 A8MUU9 505 aa2.12□□□□□ -2.07
BRCA1-217ENST00000487825 F8VRH5 84 aa2.12□□□□□ -2.07
BRCA1-217ENST00000487825 TRACP01848 142 aa2.12□□□□□ -2.07
BRCA1-217ENST00000487825 FABP4P15090 132 aa2.12□□□□□ -2.07
BRCA1-217ENST00000487825 BAGE2Q86Y30 109 aa2.12□□□□□ -2.07
BRCA1-217ENST00000487825 Q8IZM0 81 aa2.12□□□□□ -2.07
BRCA1-217ENST00000487825 NHP2Q9NX24 153 aaKnown RBP2.12□□□□□ -2.07
BRCA1-217ENST00000487825 A0A0B4J2C4 111 aa2.11□□□□□ -2.07
BRCA1-217ENST00000487825 CTXND1A0A1B0GTU2 59 aa2.11□□□□□ -2.07
BRCA1-217ENST00000487825 LYRM1O43325 122 aa2.11□□□□□ -2.07
BRCA1-217ENST00000487825 TIMM17BO60830 172 aa2.11□□□□□ -2.07
BRCA1-217ENST00000487825 SIX6O95475 246 aa2.11□□□□□ -2.07
BRCA1-217ENST00000487825 FCER1GP30273 86 aa2.11□□□□□ -2.07
BRCA1-217ENST00000487825 SERF2P84101 59 aa2.11□□□□□ -2.07
BRCA1-217ENST00000487825 Q5W150 140 aa2.11□□□□□ -2.07
BRCA1-217ENST00000487825 C2orf91Q6ZV80 131 aa2.11□□□□□ -2.07
BRCA1-217ENST00000487825 TOMM7Q9P0U1 55 aa2.11□□□□□ -2.07
BRCA1-217ENST00000487825 IL7P13232 177 aa2.1□□□□□ -2.07
BRCA1-217ENST00000487825 SPRR2DP22532 72 aa2.1□□□□□ -2.07
BRCA1-217ENST00000487825 NPC2P61916 151 aa2.1□□□□□ -2.07
BRCA1-217ENST00000487825 ATP11AUNQ6ZP68 121 aa2.1□□□□□ -2.07
BRCA1-217ENST00000487825 CHCHD1Q96BP2 118 aaKnown RBP2.1□□□□□ -2.07
BRCA1-217ENST00000487825 SPRR2FQ96RM1 72 aa2.1□□□□□ -2.07
BRCA1-217ENST00000487825 TRBV10-2A0A0K0K1G8 114 aa2.09□□□□□ -2.07
BRCA1-217ENST00000487825 H3BQ85 93 aa2.09□□□□□ -2.07
BRCA1-217ENST00000487825 FXYD2P54710 66 aa2.09□□□□□ -2.07
BRCA1-217ENST00000487825 RPL39P62891 51 aaKnown RBP2.09□□□□□ -2.07
BRCA1-217ENST00000487825 C1orf64Q8NEQ6 169 aa2.09□□□□□ -2.07
BRCA1-217ENST00000487825 PPP1R1CQ8WVI7 109 aa2.09□□□□□ -2.07
BRCA1-217ENST00000487825 CLEC2BQ92478 149 aa2.09□□□□□ -2.07
BRCA1-217ENST00000487825 TRAV7A0A075B6U4 112 aa2.08□□□□□ -2.08
BRCA1-217ENST00000487825 COLCA2A8K830 154 aa2.08□□□□□ -2.08
BRCA1-217ENST00000487825 H3BPC8 53 aa2.08□□□□□ -2.08
BRCA1-217ENST00000487825 MT-ATP8P03928 68 aa2.08□□□□□ -2.08
BRCA1-217ENST00000487825 CKS2P33552 79 aa2.08□□□□□ -2.08
BRCA1-217ENST00000487825 DSTQ03001 7570 aaKnown RBP2.08□□□□□ -2.08
BRCA1-217ENST00000487825 COX7CP15954 63 aa2.07□□□□□ -2.08
BRCA1-217ENST00000487825 SPRR1AP35321 89 aa2.07□□□□□ -2.08
BRCA1-217ENST00000487825 ATP5EP56381 51 aaPredicted RBP2.07□□□□□ -2.08
BRCA1-217ENST00000487825 FXYD6-FXYD2A0A087WZ82 144 aa2.06□□□□□ -2.08
BRCA1-217ENST00000487825 hDV103S1A0JD37 113 aa2.06□□□□□ -2.08
BRCA1-217ENST00000487825 H7C2G1 150 aa2.06□□□□□ -2.08
BRCA1-217ENST00000487825 K7EP34 96 aa2.06□□□□□ -2.08
BRCA1-217ENST00000487825 SNCGO76070 127 aa2.06□□□□□ -2.08
BRCA1-217ENST00000487825 ROMO1P60602 79 aa2.06□□□□□ -2.08
BRCA1-217ENST00000487825 LINC00299Q6ZSB3 139 aa2.06□□□□□ -2.08
BRCA1-217ENST00000487825 DSCR8Q96T75 97 aa2.06□□□□□ -2.08
BRCA1-217ENST00000487825 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
BRCA1-217ENST00000487825 A0A1B0GU33 70 aa2.05□□□□□ -2.08
BRCA1-217ENST00000487825 ERC2-IT1O76042 136 aa2.05□□□□□ -2.08
BRCA1-217ENST00000487825 ZNF22P17026 224 aaPredicted RBP2.05□□□□□ -2.08
BRCA1-217ENST00000487825 PEA15Q15121 130 aa2.05□□□□□ -2.08
BRCA1-217ENST00000487825 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
BRCA1-217ENST00000487825 Q6ZQT0 140 aa2.05□□□□□ -2.08
BRCA1-217ENST00000487825 Q8N8P6 123 aa2.05□□□□□ -2.08
BRCA1-217ENST00000487825 ST20-AS1Q8NBB2 130 aa2.05□□□□□ -2.08
BRCA1-217ENST00000487825 F8W1H4 67 aa2.04□□□□□ -2.08
BRCA1-217ENST00000487825 PPP1R17O96001 155 aa2.04□□□□□ -2.08
BRCA1-217ENST00000487825 IFI27P40305 119 aaPredicted RBP2.04□□□□□ -2.08
BRCA1-217ENST00000487825 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
BRCA1-217ENST00000487825 TMEM141Q96I45 108 aa2.04□□□□□ -2.08
BRCA1-217ENST00000487825 C14orf132Q9NPU4 83 aa2.04□□□□□ -2.08
BRCA1-217ENST00000487825 A0A0G2JQZ4 141 aa2.03□□□□□ -2.08
BRCA1-217ENST00000487825 ETDCA0A1B0GVM5 59 aa2.03□□□□□ -2.08
BRCA1-217ENST00000487825 C11orf86A6NJI1 115 aa2.03□□□□□ -2.08
BRCA1-217ENST00000487825 IGKV4-1P06312 121 aa2.03□□□□□ -2.08
BRCA1-217ENST00000487825 MT1BP07438 61 aa2.03□□□□□ -2.08
BRCA1-217ENST00000487825 UQCR10Q9UDW1 63 aa2.03□□□□□ -2.08
BRCA1-217ENST00000487825 CDKN2A-AS1Q9UH64 79 aa2.03□□□□□ -2.08
BRCA1-217ENST00000487825 A0A087WSZ3 146 aa2.02□□□□□ -2.09
BRCA1-217ENST00000487825 TRBV7-7A0A0K0K1E9 115 aa2.02□□□□□ -2.09
BRCA1-217ENST00000487825 BAALC-AS2P0C853 105 aa2.02□□□□□ -2.09
BRCA1-217ENST00000487825 COX7B2Q8TF08 81 aa2.02□□□□□ -2.09
BRCA1-217ENST00000487825 AMELXQ99217 191 aa2.02□□□□□ -2.09
BRCA1-217ENST00000487825 SMIM7Q9BQ49 75 aa2.02□□□□□ -2.09
BRCA1-217ENST00000487825 C20orf78Q9BR46 151 aa2.02□□□□□ -2.09
BRCA1-217ENST00000487825 Q9BRP9 147 aa2.02□□□□□ -2.09
BRCA1-217ENST00000487825 KCNQ1DNQ9H478 68 aa2.02□□□□□ -2.09
BRCA1-217ENST00000487825 HRES1P13985 223 aa2.01□□□□□ -2.09
BRCA1-217ENST00000487825 ADCYAP1P18509 176 aa2.01□□□□□ -2.09
BRCA1-217ENST00000487825 Q5BKY6 102 aa2.01□□□□□ -2.09
BRCA1-217ENST00000487825 RPL7L1Q6DKI1 246 aaKnown RBP2.01□□□□□ -2.09
BRCA1-217ENST00000487825 ALKAL2Q6UX46 152 aa2.01□□□□□ -2.09
BRCA1-217ENST00000487825 PMCHL2Q9BQD1 86 aa2.01□□□□□ -2.09
BRCA1-217ENST00000487825 SMIM2Q9BVW6 85 aa2.01□□□□□ -2.09
BRCA1-217ENST00000487825 SMCO4Q9NRQ5 59 aa2.01□□□□□ -2.09
BRCA1-217ENST00000487825 HMCN1Q96RW7 5635 aa2.01□□□□□ -2.09
BRCA1-217ENST00000487825 LOC107984156A0A0G2JMH3 177 aa2□□□□□ -2.09
BRCA1-217ENST00000487825 ATOX1O00244 68 aa2□□□□□ -2.09
BRCA1-217ENST00000487825 IGKCP01834 107 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms