RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 NCOR2Q9Y618 2525 aa0.17□□□□□ -2.38
USP9X-208ENST00000487625 CEP290O15078 2479 aa0.16□□□□□ -2.38
USP9X-208ENST00000487625 BSNQ9UPA5 3926 aa0.16□□□□□ -2.38
USP9X-208ENST00000487625 SETXQ7Z333 2677 aaKnown RBP0.16□□□□□ -2.38
USP9X-208ENST00000487625 UBR5O95071 2799 aaPredicted RBP0.16□□□□□ -2.38
USP9X-208ENST00000487625 HSPG2P98160 4391 aa0.16□□□□□ -2.38
USP9X-208ENST00000487625 H0YGG7 62 aa0.16□□□□□ -2.38
USP9X-208ENST00000487625 NDUFA1O15239 70 aa0.16□□□□□ -2.38
USP9X-208ENST00000487625 SPRR2AP35326 72 aa0.16□□□□□ -2.38
USP9X-208ENST00000487625 NOP10Q9NPE3 64 aaKnown RBP0.16□□□□□ -2.38
USP9X-208ENST00000487625 ACANP16112 2415 aa0.16□□□□□ -2.38
USP9X-208ENST00000487625 KMT2AQ03164 3969 aa0.15□□□□□ -2.38
USP9X-208ENST00000487625 ANK3Q12955 4377 aaKnown RBP0.15□□□□□ -2.39
USP9X-208ENST00000487625 MMP24-AS1A0A0U1RRL7 71 aa0.15□□□□□ -2.39
USP9X-208ENST00000487625 DEFB131AP59861 70 aa0.15□□□□□ -2.39
USP9X-208ENST00000487625 MROH2BQ7Z745 1585 aa0.15□□□□□ -2.39
USP9X-208ENST00000487625 SACSQ9NZJ4 4579 aa0.14□□□□□ -2.39
USP9X-208ENST00000487625 COL6A3P12111 3177 aa0.14□□□□□ -2.39
USP9X-208ENST00000487625 PDZD2O15018 2839 aa0.14□□□□□ -2.39
USP9X-208ENST00000487625 NAV2Q8IVL1 2488 aa0.14□□□□□ -2.39
USP9X-208ENST00000487625 STAB1Q9NY15 2570 aa0.14□□□□□ -2.39
USP9X-208ENST00000487625 A8MTW9 85 aa0.14□□□□□ -2.39
USP9X-208ENST00000487625 TFF3Q07654 80 aa0.14□□□□□ -2.39
USP9X-208ENST00000487625 SETD2Q9BYW2 2564 aaPredicted RBP0.14□□□□□ -2.39
USP9X-208ENST00000487625 NSD1Q96L73 2696 aaPredicted RBP0.14□□□□□ -2.39
USP9X-208ENST00000487625 FAT3Q8TDW7 4589 aa0.14□□□□□ -2.39
USP9X-208ENST00000487625 FLNBO75369 2602 aaKnown RBP0.14□□□□□ -2.39
USP9X-208ENST00000487625 FAT4Q6V0I7 4981 aa0.14□□□□□ -2.39
USP9X-208ENST00000487625 PKD1L2Q7Z442 2459 aa0.13□□□□□ -2.39
USP9X-208ENST00000487625 USP24Q9UPU5 2620 aa0.13□□□□□ -2.39
USP9X-208ENST00000487625 FLNCQ14315 2725 aa0.13□□□□□ -2.39
USP9X-208ENST00000487625 MT1AP04731 61 aa0.13□□□□□ -2.39
USP9X-208ENST00000487625 DNAH2Q9P225 4427 aa0.13□□□□□ -2.39
USP9X-208ENST00000487625 ZZEF1O43149 2961 aa0.13□□□□□ -2.39
USP9X-208ENST00000487625 COL7A1Q02388 2944 aa0.13□□□□□ -2.39
USP9X-208ENST00000487625 IGSF10Q6WRI0 2623 aa0.13□□□□□ -2.39
USP9X-208ENST00000487625 NF1P21359 2839 aa0.12□□□□□ -2.39
USP9X-208ENST00000487625 GCC2Q8IWJ2 1684 aa0.12□□□□□ -2.39
USP9X-208ENST00000487625 MAST4O15021 2626 aa0.12□□□□□ -2.39
USP9X-208ENST00000487625 DNAH11Q96DT5 4516 aa0.12□□□□□ -2.39
USP9X-208ENST00000487625 WFDC10BQ8IUB3 73 aa0.12□□□□□ -2.39
USP9X-208ENST00000487625 KAAG1Q9UBP8 84 aa0.12□□□□□ -2.39
USP9X-208ENST00000487625 HMCN2Q8NDA2 5059 aa0.12□□□□□ -2.39
USP9X-208ENST00000487625 TACC2O95359 2948 aa0.12□□□□□ -2.39
USP9X-208ENST00000487625 PKHD1L1Q86WI1 4243 aa0.11□□□□□ -2.39
USP9X-208ENST00000487625 RANBP2P49792 3224 aaKnown RBP0.11□□□□□ -2.39
USP9X-208ENST00000487625 NBASA2RRP1 2371 aa0.11□□□□□ -2.39
USP9X-208ENST00000487625 M0QY20 66 aa0.11□□□□□ -2.39
USP9X-208ENST00000487625 M0QZ58 72 aa0.11□□□□□ -2.39
USP9X-208ENST00000487625 SPRR2EP22531 72 aa0.11□□□□□ -2.39
USP9X-208ENST00000487625 KRTAP6-2Q3LI66 62 aa0.11□□□□□ -2.39
USP9X-208ENST00000487625 APC2O95996 2303 aa0.11□□□□□ -2.39
USP9X-208ENST00000487625 WNK1Q9H4A3 2382 aa0.11□□□□□ -2.39
USP9X-208ENST00000487625 APOBP04114 4563 aaKnown RBP0.11□□□□□ -2.39
USP9X-208ENST00000487625 DNAH9Q9NYC9 4486 aa0.1□□□□□ -2.39
USP9X-208ENST00000487625 DNAH3Q8TD57 4116 aa0.1□□□□□ -2.39
USP9X-208ENST00000487625 PKHD1P08F94 4074 aa0.1□□□□□ -2.39
USP9X-208ENST00000487625 SONP18583 2426 aaKnown RBP0.09□□□□□ -2.39
USP9X-208ENST00000487625 SPTBN4Q9H254 2564 aa0.09□□□□□ -2.39
USP9X-208ENST00000487625 VPS13BQ7Z7G8 4022 aa0.09□□□□□ -2.39
USP9X-208ENST00000487625 DCHS2Q6V1P9 2916 aa0.09□□□□□ -2.39
USP9X-208ENST00000487625 GCN1Q92616 2671 aaKnown RBP0.09□□□□□ -2.39
USP9X-208ENST00000487625 LRP2P98164 4655 aa0.09□□□□□ -2.4
USP9X-208ENST00000487625 SPRR2FQ96RM1 72 aa0.09□□□□□ -2.4
USP9X-208ENST00000487625 HECTD4Q9Y4D8 3996 aa0.09□□□□□ -2.4
USP9X-208ENST00000487625 TEP1Q99973 2627 aaKnown RBP0.09□□□□□ -2.4
USP9X-208ENST00000487625 ZANQ9Y493 2812 aa0.09□□□□□ -2.4
USP9X-208ENST00000487625 DYNC2H1Q8NCM8 4307 aaKnown RBP0.09□□□□□ -2.4
USP9X-208ENST00000487625 VPS13DQ5THJ4 4388 aa0.08□□□□□ -2.4
USP9X-208ENST00000487625 ANKRD11Q6UB99 2663 aaPredicted RBP0.08□□□□□ -2.4
USP9X-208ENST00000487625 H3BNG1 76 aa0.08□□□□□ -2.4
USP9X-208ENST00000487625 TNP1P09430 55 aa0.08□□□□□ -2.4
USP9X-208ENST00000487625 KRTAP8-1Q8IUC2 63 aa0.08□□□□□ -2.4
USP9X-208ENST00000487625 TENM2Q9NT68 2774 aa0.08□□□□□ -2.4
USP9X-208ENST00000487625 LYSTQ99698 3801 aa0.08□□□□□ -2.4
USP9X-208ENST00000487625 CUBNO60494 3623 aa0.07□□□□□ -2.4
USP9X-208ENST00000487625 DNAH1Q9P2D7 4330 aa0.07□□□□□ -2.4
USP9X-208ENST00000487625 CLPSL2Q6UWE3 100 aa0.07□□□□□ -2.4
USP9X-208ENST00000487625 SSPOA2VEC9 5147 aa0.07□□□□□ -2.4
USP9X-208ENST00000487625 HTTP42858 3142 aa0.07□□□□□ -2.4
USP9X-208ENST00000487625 SRRM2Q9UQ35 2752 aaKnown RBP0.07□□□□□ -2.4
USP9X-208ENST00000487625 DMXL1Q9Y485 3027 aa0.07□□□□□ -2.4
USP9X-208ENST00000487625 TGP01266 2768 aa0.06□□□□□ -2.4
USP9X-208ENST00000487625 FLGP20930 4061 aaPredicted RBP0.06□□□□□ -2.4
USP9X-208ENST00000487625 SNRPGP62308 76 aaKnown RBP0.06□□□□□ -2.4
USP9X-208ENST00000487625 KRTAP19-5Q3LI72 72 aa0.06□□□□□ -2.4
USP9X-208ENST00000487625 DNAH8Q96JB1 4490 aa0.06□□□□□ -2.4
USP9X-208ENST00000487625 FLNAP21333 2647 aaKnown RBP0.06□□□□□ -2.4
USP9X-208ENST00000487625 ANKHD1Q8IWZ3 2542 aaKnown RBP0.06□□□□□ -2.4
USP9X-208ENST00000487625 MAP1AP78559 2803 aaPredicted RBP0.05□□□□□ -2.4
USP9X-208ENST00000487625 HIVEP1P15822 2718 aa0.05□□□□□ -2.4
USP9X-208ENST00000487625 MTORP42345 2549 aa0.05□□□□□ -2.4
USP9X-208ENST00000487625 SVEP1Q4LDE5 3571 aa0.05□□□□□ -2.4
USP9X-208ENST00000487625 EPG5Q9HCE0 2579 aa0.05□□□□□ -2.4
USP9X-208ENST00000487625 ACACAQ13085 2346 aa0.05□□□□□ -2.4
USP9X-208ENST00000487625 TRIOO75962 3097 aa0.05□□□□□ -2.4
USP9X-208ENST00000487625 LAMA5O15230 3695 aa0.05□□□□□ -2.4
USP9X-208ENST00000487625 DMBT1Q9UGM3 2413 aaPredicted RBP0.04□□□□□ -2.4
USP9X-208ENST00000487625 POLR2KP53803 58 aaKnown RBP0.04□□□□□ -2.4
USP9X-208ENST00000487625 ACACBO00763 2458 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 1940.2 ms