RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 KRTAP11-1Q8IUC1 163 aa4.62□□□□□ -1.67
COL6A4P1-202ENST00000487147 ASB16-AS1Q495Z4 193 aa4.62□□□□□ -1.67
COL6A4P1-202ENST00000487147 Q96NJ1 140 aa4.6□□□□□ -1.67
COL6A4P1-202ENST00000487147 VWFP04275 2813 aa4.6□□□□□ -1.67
COL6A4P1-202ENST00000487147 IGLV7-43P04211 117 aa4.6□□□□□ -1.67
COL6A4P1-202ENST00000487147 WWC2-AS2Q96NR7 200 aa4.6□□□□□ -1.67
COL6A4P1-202ENST00000487147 STAB2Q8WWQ8 2551 aa4.59□□□□□ -1.67
COL6A4P1-202ENST00000487147 CSMD2Q7Z408 3487 aa4.59□□□□□ -1.67
COL6A4P1-202ENST00000487147 KRTAP16-1A8MUX0 517 aa4.59□□□□□ -1.68
COL6A4P1-202ENST00000487147 TENM3Q9P273 2699 aa4.58□□□□□ -1.68
COL6A4P1-202ENST00000487147 A0A087X002 238 aa4.58□□□□□ -1.68
COL6A4P1-202ENST00000487147 NOTCH2NLQ7Z3S9 236 aa4.58□□□□□ -1.68
COL6A4P1-202ENST00000487147 Q5W150 140 aa4.58□□□□□ -1.68
COL6A4P1-202ENST00000487147 PANO1I0J062 215 aa4.58□□□□□ -1.68
COL6A4P1-202ENST00000487147 ZFHX3Q15911 3703 aa4.57□□□□□ -1.68
COL6A4P1-202ENST00000487147 DMAC1Q96GE9 116 aa4.56□□□□□ -1.68
COL6A4P1-202ENST00000487147 LINC00483Q53H64 154 aa4.55□□□□□ -1.68
COL6A4P1-202ENST00000487147 Q8N1X5 172 aa4.55□□□□□ -1.68
COL6A4P1-202ENST00000487147 TENM1Q9UKZ4 2725 aa4.55□□□□□ -1.68
COL6A4P1-202ENST00000487147 TYMSOSQ8TAI1 123 aa4.55□□□□□ -1.68
COL6A4P1-202ENST00000487147 ROMO1P60602 79 aa4.54□□□□□ -1.68
COL6A4P1-202ENST00000487147 VPS13CQ709C8 3753 aa4.54□□□□□ -1.68
COL6A4P1-202ENST00000487147 KMT2BQ9UMN6 2715 aaPredicted RBP4.52□□□□□ -1.69
COL6A4P1-202ENST00000487147 SPATA8Q6RVD6 105 aa4.52□□□□□ -1.69
COL6A4P1-202ENST00000487147 PLAC8Q9NZF1 115 aa4.52□□□□□ -1.69
COL6A4P1-202ENST00000487147 PKD1L1Q8TDX9 2849 aa4.51□□□□□ -1.69
COL6A4P1-202ENST00000487147 KRTAP13-1Q8IUC0 172 aa4.51□□□□□ -1.69
COL6A4P1-202ENST00000487147 PDZD2O15018 2839 aa4.51□□□□□ -1.69
COL6A4P1-202ENST00000487147 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
COL6A4P1-202ENST00000487147 A0A1B0GU33 70 aa4.46□□□□□ -1.69
COL6A4P1-202ENST00000487147 DMBT1Q9UGM3 2413 aaPredicted RBP4.44□□□□□ -1.7
COL6A4P1-202ENST00000487147 C9orf92A6NGG3 77 aa4.44□□□□□ -1.7
COL6A4P1-202ENST00000487147 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
COL6A4P1-202ENST00000487147 LINC00304Q8N9R0 145 aa4.44□□□□□ -1.7
COL6A4P1-202ENST00000487147 KRTAP25-1Q3LHN0 102 aa4.43□□□□□ -1.7
COL6A4P1-202ENST00000487147 FLG2Q5D862 2391 aaPredicted RBP4.43□□□□□ -1.7
COL6A4P1-202ENST00000487147 Q6ZRN7 208 aaPredicted RBP4.42□□□□□ -1.7
COL6A4P1-202ENST00000487147 NBPF19A0A087WUL8 3843 aa4.41□□□□□ -1.7
COL6A4P1-202ENST00000487147 CRIPTQ9P021 101 aa4.41□□□□□ -1.7
COL6A4P1-202ENST00000487147 SRRM2Q9UQ35 2752 aaKnown RBP4.41□□□□□ -1.7
COL6A4P1-202ENST00000487147 TENM4Q6N022 2769 aa4.4□□□□□ -1.7
COL6A4P1-202ENST00000487147 FBN1P35555 2871 aaKnown RBP4.4□□□□□ -1.7
COL6A4P1-202ENST00000487147 OTOGQ6ZRI0 2925 aa4.39□□□□□ -1.71
COL6A4P1-202ENST00000487147 A0A0D9SG42 100 aa4.37□□□□□ -1.71
COL6A4P1-202ENST00000487147 TRRAPQ9Y4A5 3859 aa4.36□□□□□ -1.71
COL6A4P1-202ENST00000487147 SEC61BP60468 96 aaKnown RBP4.35□□□□□ -1.71
COL6A4P1-202ENST00000487147 C20orf166-AS1Q96NR2 134 aa4.34□□□□□ -1.71
COL6A4P1-202ENST00000487147 H1FX-AS1Q4G0G2 97 aa4.34□□□□□ -1.72
COL6A4P1-202ENST00000487147 TGP01266 2768 aa4.33□□□□□ -1.72
COL6A4P1-202ENST00000487147 ANK3Q12955 4377 aaKnown RBP4.33□□□□□ -1.72
COL6A4P1-202ENST00000487147 A8MUU9 505 aa4.32□□□□□ -1.72
COL6A4P1-202ENST00000487147 SMR3BP02814 79 aaPredicted RBP4.32□□□□□ -1.72
COL6A4P1-202ENST00000487147 TENM2Q9NT68 2774 aa4.32□□□□□ -1.72
COL6A4P1-202ENST00000487147 KRTAP13-3Q3SY46 172 aa4.32□□□□□ -1.72
COL6A4P1-202ENST00000487147 KRTAP13-2Q52LG2 175 aa4.32□□□□□ -1.72
COL6A4P1-202ENST00000487147 KRTAP10-2P60368 255 aa4.32□□□□□ -1.72
COL6A4P1-202ENST00000487147 ZNF469Q96JG9 3925 aaPredicted RBP4.31□□□□□ -1.72
COL6A4P1-202ENST00000487147 AKAP9Q99996 3911 aa4.29□□□□□ -1.72
COL6A4P1-202ENST00000487147 KRTAP10-1P60331 282 aa4.29□□□□□ -1.72
COL6A4P1-202ENST00000487147 RPL37P61927 97 aaKnown RBP4.27□□□□□ -1.73
COL6A4P1-202ENST00000487147 Q6ZSA8 131 aa4.27□□□□□ -1.73
COL6A4P1-202ENST00000487147 H0YAA0 97 aa4.23□□□□□ -1.73
COL6A4P1-202ENST00000487147 COX6B2Q6YFQ2 88 aa4.23□□□□□ -1.73
COL6A4P1-202ENST00000487147 P0C880 135 aa4.22□□□□□ -1.73
COL6A4P1-202ENST00000487147 COL7A1Q02388 2944 aa4.2□□□□□ -1.74
COL6A4P1-202ENST00000487147 S4R3F8 94 aa4.17□□□□□ -1.74
COL6A4P1-202ENST00000487147 FBN3Q75N90 2809 aa4.17□□□□□ -1.74
COL6A4P1-202ENST00000487147 KRTAP1-4P0C5Y4 121 aa4.17□□□□□ -1.74
COL6A4P1-202ENST00000487147 RPS29P62273 56 aaKnown RBP4.17□□□□□ -1.74
COL6A4P1-202ENST00000487147 LCE2BO14633 110 aa4.15□□□□□ -1.74
COL6A4P1-202ENST00000487147 CSMD3Q7Z407 3707 aa4.15□□□□□ -1.75
COL6A4P1-202ENST00000487147 LCE2CQ5TA81 110 aa4.1□□□□□ -1.75
COL6A4P1-202ENST00000487147 MEGF8Q7Z7M0 2845 aa4.09□□□□□ -1.75
COL6A4P1-202ENST00000487147 CAMK2N1Q7Z7J9 78 aa4.08□□□□□ -1.76
COL6A4P1-202ENST00000487147 C10orf95Q9H7T3 257 aa4.07□□□□□ -1.76
COL6A4P1-202ENST00000487147 HUWE1Q7Z6Z7 4374 aaKnown RBP4.03□□□□□ -1.76
COL6A4P1-202ENST00000487147 R4GN34 69 aa4.02□□□□□ -1.77
COL6A4P1-202ENST00000487147 KRTAP3-1Q9BYR8 98 aa4.01□□□□□ -1.77
COL6A4P1-202ENST00000487147 KRTAP21-3Q3LHN1 58 aa4.01□□□□□ -1.77
COL6A4P1-202ENST00000487147 LCE2AQ5TA79 106 aaPredicted RBP4.01□□□□□ -1.77
COL6A4P1-202ENST00000487147 M0QZ58 72 aa4□□□□□ -1.77
COL6A4P1-202ENST00000487147 DNAH10Q8IVF4 4471 aa4□□□□□ -1.77
COL6A4P1-202ENST00000487147 KRTAP15-1Q3LI76 137 aa3.95□□□□□ -1.78
COL6A4P1-202ENST00000487147 TPRXLQ17RH7 258 aa3.94□□□□□ -1.78
COL6A4P1-202ENST00000487147 Q5VSD8 79 aa3.94□□□□□ -1.78
COL6A4P1-202ENST00000487147 KRTAP13-4Q3LI77 160 aa3.89□□□□□ -1.79
COL6A4P1-202ENST00000487147 XP32Q5T750 250 aa3.89□□□□□ -1.79
COL6A4P1-202ENST00000487147 KRTAP10-6P60371 365 aaPredicted RBP3.89□□□□□ -1.79
COL6A4P1-202ENST00000487147 KRTAP12-2P59991 146 aa3.88□□□□□ -1.79
COL6A4P1-202ENST00000487147 PLECQ15149 4684 aaKnown RBP3.87□□□□□ -1.79
COL6A4P1-202ENST00000487147 PLAC4Q8WY50 150 aa3.86□□□□□ -1.79
COL6A4P1-202ENST00000487147 LORP23490 312 aaPredicted RBP3.86□□□□□ -1.79
COL6A4P1-202ENST00000487147 DNAH1Q9P2D7 4330 aa3.85□□□□□ -1.79
COL6A4P1-202ENST00000487147 ALMS1Q8TCU4 4167 aa3.85□□□□□ -1.79
COL6A4P1-202ENST00000487147 DNAH9Q9NYC9 4486 aa3.85□□□□□ -1.79
COL6A4P1-202ENST00000487147 ANK2Q01484 3957 aa3.85□□□□□ -1.79
COL6A4P1-202ENST00000487147 DNAH8Q96JB1 4490 aa3.84□□□□□ -1.8
COL6A4P1-202ENST00000487147 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
COL6A4P1-202ENST00000487147 KRTAP10-8P60410 259 aa3.8□□□□□ -1.8
COL6A4P1-202ENST00000487147 DNAH11Q96DT5 4516 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms